| | gene | name | fitness | t score | description | |
|---|
| b0462 | acrB | -3.5 | -13.9 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -3.4 | -9.5 | multidrug efflux system (NCBI) | compare |
| b2279 | nuoK | -3.3 | -2.2 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4480 | hdfR | -2.8 | -5.0 | transcriptional regulator HdfR (NCBI) | compare |
| b3035 | tolC | -2.8 | -6.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3465 | yhhF | -2.5 | -5.5 | predicted methyltransferase (NCBI) | compare |
| b2188 | yejM | -2.4 | -7.8 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3545 | proK | -2.4 | -2.7 | tRNA-Pro (NCBI) | compare |
| b1677 | lpp | -2.3 | -2.6 | murein lipoprotein (NCBI) | compare |
| b3764 | yifE | -2.3 | -4.0 | hypothetical protein (NCBI) | compare |
| b3341 | rpsG | -2.3 | -1.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b2814 | metZ | -2.1 | -2.0 | tRNA-Met (NCBI) | compare |
| b3163 | nlpI | -2.0 | -2.7 | hypothetical protein (NCBI) | compare |
| b4413 | sokC | -1.9 | -2.2 | regulatory antisense RNA (NCBI) | compare |
| b1103 | ycfF | -1.8 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2282 | nuoH | -1.8 | -2.3 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2807 | ygdD | -1.7 | -4.1 | conserved inner membrane protein (NCBI) | compare |
| b3021 | ygiT | -1.7 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0014 | dnaK | -1.7 | -1.2 | molecular chaperone DnaK (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1607 | ydgC | -1.7 | -2.1 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4203 | rplI | -1.6 | -3.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b2553 | glnB | -1.6 | -4.0 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3387 | dam | -1.6 | -7.4 | DNA adenine methylase (NCBI) | compare |
| b4608 | ryfC | -1.5 | -2.3 | Novel sRNA, function unknown (RefSeq) | compare |
| b1531 | marA | -1.5 | -3.6 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1863 | ruvC | -1.5 | -1.0 | Holliday junction resolvase (NCBI) | compare |
| b0912 | ihfB | -1.5 | -2.8 | integration host factor subunit beta (NCBI) | compare |
| b2317 | dedA | -1.4 | -3.8 | conserved inner membrane protein (NCBI) | compare |
| b0934 | ycbM | -1.4 | -1.9 | putative transport system permease protein (VIMSS) | compare |
| b4201 | priB | -1.4 | -2.2 | primosomal replication protein N (NCBI) | compare |
| b3199 | yrbK | -1.4 | -2.2 | hypothetical protein (NCBI) | compare |
| b1861 | ruvA | -1.4 | -0.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1346 | ydaQ | -1.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4603 | rseX | -1.4 | -0.7 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1476 | fdnI | -1.3 | -1.0 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1667 | ydhR | -1.3 | -2.4 | hypothetical protein (NCBI) | compare |
| b0502 | ylbG | -1.3 | -2.7 | no description | compare |
| b4410 | ecnA | -1.3 | -1.6 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b3784 | rfe | -1.3 | -8.1 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3844 | fre | -1.3 | -3.9 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0605 | ahpC | -1.3 | -2.7 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1413 | hrpA | -1.2 | -6.3 | ATP-dependent helicase (RefSeq) | conserved |
| b2168 | fruK | -1.2 | -1.3 | 1-phosphofructokinase (NCBI) | compare |
| b1823 | cspC | -1.2 | -1.7 | stress protein, member of the CspA-family (NCBI) | compare |
| b0722 | sdhD | -1.2 | -3.0 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1595 | ynfL | -1.2 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1960 | vsr | -1.2 | -2.7 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b1954 | dsrA | -1.2 | -2.1 | regulatory antisense RNA (NCBI) | compare |
| b4529 | ydbJ | -1.2 | -1.1 | hypothetical protein (NCBI) | compare |
| b1686 | ydiI | -1.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b0683 | fur | -1.2 | -1.1 | ferric uptake regulator (NCBI) | compare |
| b2906 | visC | -1.2 | -3.8 | hypothetical protein (NCBI) | compare |
| b0430 | cyoC | -1.2 | -2.9 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b4431 | rprA | -1.2 | -1.6 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b0053 | surA | -1.1 | -1.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1074 | flgC | -1.1 | -2.1 | flagellar basal-body rod protein C (NCBI) | compare |
| b3002 | yqhA | -1.1 | -1.9 | hypothetical protein (NCBI) | compare |
| b1830 | prc | -1.1 | -2.8 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1847 | yebF | -1.1 | -1.2 | predicted protein (RefSeq) | compare |
| b2017 | yefM | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2278 | nuoL | -1.1 | -5.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b0724 | sdhB | -1.1 | -4.2 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0145 | dksA | -1.1 | -0.8 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3931 | hslU | -1.1 | -6.4 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0429 | cyoD | -1.1 | -3.3 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b2114 | metG | -1.1 | -1.9 | methionyl-tRNA synthetase (NCBI) | compare |
| b1575 | dicB | -1.1 | -1.3 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b4533 | ynfO | -1.1 | -1.6 | Qin prophage; predicted protein (NCBI) | compare |
| b4550 | yhdL | -1.1 | -3.0 | hypothetical protein (NCBI) | compare |
| b4676 | yoaK | -1.1 | -0.7 | expressed protein (RefSeq) | compare |
| b1693 | aroD | -1.0 | -3.6 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1524 | yneH | -1.0 | -0.9 | predicted glutaminase (NCBI) | compare |
| b3650 | spoT | -1.0 | -4.0 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2829 | ptsP | -1.0 | -6.8 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b2363 | yfdT | -1.0 | -1.1 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3096 | yqjB | -1.0 | -3.3 | hypothetical protein (NCBI) | compare |
| b2006 | yeeW | -1.0 | -2.7 | CP4-44 prophage; predicted protein (RefSeq) | compare |
| b2286 | nuoC | -1.0 | -3.2 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0819 | ybiS | -1.0 | -4.9 | hypothetical protein (NCBI) | compare |
| b1860 | ruvB | -1.0 | -0.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b2174 | b2174 | -1.0 | -4.6 | orf, hypothetical protein (VIMSS) | compare |
| b2215 | ompC | -1.0 | -4.7 | outer membrane porin protein C (NCBI) | compare |
| b4370 | leuQ | -1.0 | -1.4 | tRNA-Leu (NCBI) | compare |
| b2356 | yfdM | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1192 | ldcA | -1.0 | -3.0 | L,D-carboxypeptidase A (NCBI) | compare |
| b3017 | sufI | -1.0 | -6.3 | repressor protein for FtsI (NCBI) | compare |
| b0432 | cyoA | -1.0 | -5.7 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b1648 | b1648 | -1.0 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1357 | ydaS | -0.9 | -1.4 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1109 | ndh | -0.9 | -2.3 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b1739 | osmE | -0.9 | -1.8 | DNA-binding transcriptional activator (NCBI) | compare |
| b3082 | ygjM | -0.9 | -0.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2635 | ypjK | -0.9 | -1.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0741 | pal | -0.9 | -1.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0738 | tolR | -0.9 | -1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4000 | hupA | -0.9 | -2.9 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3239 | yhcO | -0.9 | -2.1 | predicted barnase inhibitor (NCBI) | compare |
| b1620 | malI | -0.9 | -1.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2288 | nuoA | -0.9 | -1.9 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2479 | gcvR | -0.9 | -2.7 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b4503 | yafF | -0.9 | -0.6 | no description | compare |
| b1370 | insH-5 | -0.9 | -1.5 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b1818 | manY | -0.9 | -1.6 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b4441 | glmY | -0.9 | -1.5 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1482 | osmC | -0.9 | -1.4 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3192 | yrbC | -0.9 | -4.7 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0723 | sdhA | -0.9 | -5.2 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b2144 | sanA | -0.9 | -4.7 | hypothetical protein (NCBI) | compare |
| b2318 | truA | -0.9 | -1.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2445 | yffN | -0.9 | -2.2 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2659 | b2659 | -0.9 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2280 | nuoJ | -0.9 | -2.7 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2346 | vacJ | -0.9 | -3.5 | predicted lipoprotein (NCBI) | compare |
| b1070 | flgN | -0.9 | -1.1 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1429 | tehA | -0.9 | -0.7 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3194 | yrbE | -0.9 | -5.2 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2189 | proL | -0.8 | -1.2 | tRNA-Pro (NCBI) | compare |
| b2276 | nuoN | -0.8 | -2.5 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3191 | yrbB | -0.8 | -4.1 | orf, hypothetical protein (VIMSS) | compare |
| b1523 | yneG | -0.8 | -1.6 | hypothetical protein (NCBI) | compare |
| b2435 | amiA | -0.8 | -2.9 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0431 | cyoB | -0.8 | -5.0 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b1984 | asnW | -0.8 | -0.9 | tRNA-Asn (NCBI) | compare |
| b0730 | mngR | -0.8 | -0.5 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1658 | purR | -0.8 | -2.9 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b4511 | ybdZ | -0.8 | -2.2 | hypothetical protein (NCBI) | compare |
| b3726 | pstA | -0.8 | -1.8 | phosphate transporter subunit (NCBI) | compare |
| b0428 | cyoE | -0.8 | -3.5 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1669 | ydhT | -0.8 | -1.6 | hypothetical protein (NCBI) | compare |
| b0437 | clpP | -0.8 | -2.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1506 | yneL | -0.8 | -0.8 | predicted transcriptional regulator (NCBI) | compare |
| b3652 | recG | -0.8 | -3.6 | ATP-dependent DNA helicase (NCBI) | compare |
| b0953 | rmf | -0.8 | -1.7 | ribosome modulation factor (NCBI) | compare |
| b0721 | sdhC | -0.8 | -2.4 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0082 | mraW | -0.8 | -1.4 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2156 | lysP | -0.8 | -4.5 | lysine transporter (NCBI) | compare |
| b3195 | yrbF | -0.8 | -4.7 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1183 | umuD | -0.8 | -1.1 | DNA polymerase V, subunit D (NCBI) | compare |
| b2357 | yfdN | -0.8 | -1.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0862 | artQ | -0.8 | -1.9 | arginine transporter subunit (NCBI) | compare |
| b0740 | tolB | -0.7 | -1.4 | translocation protein TolB precursor (NCBI) | compare |
| b0617 | citD | -0.7 | -1.3 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b4045 | yjbJ | -0.7 | -1.3 | predicted stress response protein (NCBI) | compare |
| b1580 | rspB | -0.7 | -2.6 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b3193 | yrbD | -0.7 | -3.9 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b3632 | rfaQ | -0.7 | -5.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0957 | ompA | -0.7 | -1.7 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2579 | yfiD | -0.7 | -1.1 | pyruvate formate lyase subunit (NCBI) | compare |
| b1763 | topB | -0.7 | -2.4 | DNA topoisomerase III (NCBI) | compare |
| b1904 | yecR | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b1793 | yoaF | -0.7 | -1.4 | conserved outer membrane protein (NCBI) | compare |
| b2281 | nuoI | -0.7 | -1.2 | NADH dehydrogenase subunit I (NCBI) | compare |
| b4046 | yjbK | -0.7 | -2.9 | putative regulator (VIMSS) | compare |
| b1663 | mdtK | -0.7 | -3.0 | multidrug efflux protein NorM (NCBI) | compare |
| b4547 | ypfN | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b3389 | aroB | -0.7 | -4.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b3414 | gntY | -0.7 | -2.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b0189 | yaeO | -0.7 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2283 | nuoG | -0.7 | -3.0 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3642 | pyrE | -0.7 | -2.2 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3617 | kbl | -0.7 | -3.1 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b4527 | b1354 | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3933 | ftsN | -0.7 | -4.4 | essential cell division protein (NCBI) | compare |
| b1323 | tyrR | -0.7 | -2.4 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b3029 | ygiN | -0.7 | -0.9 | quinol monooxygenase (NCBI) | compare |
| b2285 | nuoE | -0.7 | -1.1 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3236 | mdh | -0.7 | -3.5 | malate dehydrogenase (NCBI) | compare |
| b4598 | yncL | -0.7 | -1.5 | hypothetical protein (RefSeq) | compare |
| b1689 | b1689 | -0.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0784 | moaD | -0.7 | -1.2 | molybdopterin synthase, small subunit (NCBI) | compare |
| b0720 | gltA | -0.7 | -2.6 | citrate synthase (NCBI) | compare |
| b0677 | nagA | -0.7 | -2.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0018 | mokC | -0.7 | -0.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b4369 | leuP | -0.7 | -1.5 | tRNA-Leu (NCBI) | compare |
| b1187 | fadR | -0.7 | -2.4 | fatty acid metabolism regulator (NCBI) | compare |
| b4515 | ybgT | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b1286 | rnb | -0.7 | -1.1 | exoribonuclease II (NCBI) | compare |
| b2666 | yqaE | -0.7 | -2.2 | predicted membrane protein (NCBI) | compare |
| b3600 | mtlD | -0.7 | -4.2 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b0247 | ykfG | -0.7 | -0.9 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b4701 | sokX | -0.7 | -0.6 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0049 | apaH | -0.7 | -0.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b3807 | cyaY | -0.7 | -3.1 | frataxin-like protein (NCBI) | compare |
| b3932 | hslV | -0.7 | -4.0 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b1936 | intG | -0.6 | -0.4 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1598 | ydgD | -0.6 | -2.6 | predicted peptidase (NCBI) | compare |
| b3868 | glnG | -0.6 | -1.9 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b2839 | lysR | -0.6 | -2.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1573 | ydfC | -0.6 | -0.8 | Qin prophage; predicted protein (RefSeq) | compare |
| b0481 | ybaK | -0.6 | -2.0 | hypothetical protein (NCBI) | compare |
| b2419 | yfeK | -0.6 | -1.1 | hypothetical protein (NCBI) | compare |
| b1514 | lsrC | -0.6 | -1.1 | AI2 transporter (NCBI) | compare |
| b1448 | yncA | -0.6 | -1.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0877 | ybjX | -0.6 | -2.7 | hypothetical protein (NCBI) | compare |
| b2910 | zapA | -0.6 | -2.1 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b3119 | tdcR | -0.6 | -1.2 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b2026 | hisI | -0.6 | -3.1 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) | compare |
| b0773 | ybhB | -0.6 | -1.9 | predicted kinase inhibitor (NCBI) | compare |
| b2399 | yfeD | -0.6 | -2.2 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |