Experiment set8IT090 for Pseudomonas putida KT2440
Adaptation in M9 media timecourse 4; day 3
Group: reactor_pregrowthMedia: M9_1percentGlucose
Culturing: Putida_ML5_JBEI, flask, Aerobic, at 30 (C), shaken=250 rpm
By: Thomas Eng on 6/1/18
Media components: 10 g/L D-Glucose, 2 mM Magnesium sulfate, 0.1 mM Calcium chloride, 12.8 g/L Sodium phosphate dibasic heptahydrate, 3 g/L Potassium phosphate monobasic, 0.5 g/L Sodium Chloride, 1 g/L Ammonium chloride
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Glycogen metabolism | 1 |
| Maltose and Maltodextrin Utilization | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| glycogen degradation I | 8 | 6 | 3 |
| glycogen degradation II | 6 | 5 | 2 |
| starch degradation V | 4 | 3 | 1 |
| starch degradation III | 4 | 2 | 1 |
| sucrose biosynthesis II | 8 | 6 | 1 |