| | gene | name | fitness | t score | description | |
|---|
| b0920 | ycbC | -5.4 | -3.7 | conserved inner membrane protein (NCBI) | compare |
| b2175 | spr | -3.5 | -4.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0462 | acrB | -3.4 | -16.5 | multidrug efflux system protein (NCBI) | compare |
| b0149 | mrcB | -3.3 | -13.2 | penicillin-binding protein 1b (NCBI) | compare |
| b1865 | nudB | -2.8 | -1.9 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0463 | acrA | -2.8 | -11.5 | multidrug efflux system (NCBI) | compare |
| b4699 | fnrS | -2.5 | -1.4 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1830 | prc | -2.5 | -3.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0957 | ompA | -2.5 | -3.6 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3205 | yhbJ | -2.4 | -3.6 | hypothetical protein (NCBI) | compare |
| b0683 | fur | -2.3 | -1.5 | ferric uptake regulator (NCBI) | compare |
| b0088 | murD | -2.2 | -2.8 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3035 | tolC | -2.1 | -7.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1855 | lpxM | -2.1 | -5.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1863 | ruvC | -2.1 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b0142 | folK | -2.1 | -1.1 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1882 | cheY | -2.1 | -1.1 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1279 | yciS | -2.0 | -1.5 | conserved inner membrane protein (NCBI) | compare |
| b1861 | ruvA | -2.0 | -1.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0726 | sucA | -2.0 | -3.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1105 | ycfM | -2.0 | -4.8 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0617 | citD | -1.9 | -2.8 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b1506 | yneL | -1.9 | -1.3 | predicted transcriptional regulator (NCBI) | compare |
| b4701 | sokX | -1.8 | -1.2 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0018 | mokC | -1.7 | -1.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b2501 | ppk | -1.7 | -7.6 | polyphosphate kinase (NCBI) | compare |
| b2363 | yfdT | -1.7 | -1.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3792 | wzxE | -1.7 | -5.0 | O-antigen translocase (NCBI) | compare |
| b1860 | ruvB | -1.7 | -1.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b3977 | tyrU | -1.7 | -1.3 | tRNA-Tyr (NCBI) | compare |
| b3784 | rfe | -1.6 | -10.7 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b4594 | ymgJ | -1.6 | -1.7 | hypothetical protein (RefSeq) | compare |
| b0053 | surA | -1.5 | -3.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1192 | ldcA | -1.5 | -4.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b3630 | rfaP | -1.5 | -6.6 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0738 | tolR | -1.5 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1084 | rne | -1.5 | -4.6 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3387 | dam | -1.5 | -8.4 | DNA adenine methylase (NCBI) | compare |
| b3082 | ygjM | -1.5 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2037 | rfbX | -1.5 | -5.5 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b4481 | rffT | -1.4 | -5.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2518 | ndk | -1.4 | -2.0 | nucleoside diphosphate kinase (NCBI) | compare |
| b3620 | rfaF | -1.4 | -4.2 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3641 | ttk | -1.4 | -7.1 | putative transcriptional regulator (VIMSS) | compare |
| b1235 | rssB | -1.4 | -5.7 | response regulator of RpoS (NCBI) | compare |
| b3791 | rffA | -1.4 | -6.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3163 | nlpI | -1.4 | -3.0 | hypothetical protein (NCBI) | compare |
| b3026 | qseC | -1.4 | -2.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2279 | nuoK | -1.3 | -2.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4676 | yoaK | -1.3 | -0.8 | expressed protein (RefSeq) | compare |
| b3842 | rfaH | -1.3 | -4.2 | transcriptional activator RfaH (NCBI) | compare |
| b0740 | tolB | -1.3 | -2.8 | translocation protein TolB precursor (NCBI) | compare |
| b1936 | intG | -1.3 | -0.8 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b2299 | yfcD | -1.3 | -4.0 | predicted NUDIX hydrolase (NCBI) | compare |
| b4201 | priB | -1.3 | -2.2 | primosomal replication protein N (NCBI) | compare |
| b3621 | rfaC | -1.3 | -3.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1198 | dhaM | -1.3 | -4.5 | fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component (RefSeq) | compare |
| b1429 | tehA | -1.3 | -1.0 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3790 | rffC | -1.2 | -4.3 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0437 | clpP | -1.2 | -4.0 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1075 | flgD | -1.2 | -2.8 | flagellar basal body rod modification protein D (NCBI) | compare |
| b1286 | rnb | -1.2 | -1.7 | exoribonuclease II (NCBI) | compare |
| b1524 | yneH | -1.2 | -1.1 | predicted glutaminase (NCBI) | compare |
| b3627 | rfaI | -1.2 | -5.3 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1556 | b1556 | -1.2 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2017 | yefM | -1.2 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4520 | ymgF | -1.2 | -1.0 | hypothetical protein (NCBI) | compare |
| b1531 | marA | -1.2 | -3.2 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b0840 | deoR | -1.2 | -3.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1739 | osmE | -1.2 | -2.2 | DNA-binding transcriptional activator (NCBI) | compare |
| b3962 | udhA | -1.2 | -4.2 | putative oxidoreductase (VIMSS) | compare |
| b3443 | yrhA | -1.2 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3652 | recG | -1.1 | -5.8 | ATP-dependent DNA helicase (NCBI) | compare |
| b1620 | malI | -1.1 | -2.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4413 | sokC | -1.1 | -1.8 | regulatory antisense RNA (NCBI) | compare |
| b3199 | yrbK | -1.1 | -2.3 | hypothetical protein (NCBI) | compare |
| b1677 | lpp | -1.1 | -1.5 | murein lipoprotein (NCBI) | compare |
| b3631 | rfaG | -1.1 | -7.4 | glucosyltransferase I (NCBI) | compare |
| b3229 | sspA | -1.1 | -1.8 | stringent starvation protein A (NCBI) | compare |
| b0605 | ahpC | -1.1 | -2.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1667 | ydhR | -1.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b0989 | cspH | -1.1 | -1.5 | stress protein, member of the CspA-family (NCBI) | compare |
| b1346 | ydaQ | -1.1 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2377 | yfdY | -1.1 | -2.6 | predicted inner membrane protein (NCBI) | compare |
| b1238 | tdk | -1.1 | -2.7 | thymidine kinase (NCBI) | compare |
| b2168 | fruK | -1.0 | -1.4 | 1-phosphofructokinase (NCBI) | compare |
| b4596 | yciZ | -1.0 | -1.5 | hypothetical protein (RefSeq) | compare |
| b3742 | mioC | -1.0 | -3.7 | flavodoxin (NCBI) | compare |
| b2783 | chpR | -1.0 | -2.0 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b4515 | ybgT | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b4698 | mgrR | -1.0 | -2.0 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b2376 | ypdI | -1.0 | -2.2 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b0724 | sdhB | -1.0 | -4.3 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3813 | uvrD | -1.0 | -7.3 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b1348 | lar | -1.0 | -1.3 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4202 | rpsR | -1.0 | -1.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b2494 | yfgC | -1.0 | -4.9 | predicted peptidase (NCBI) | compare |
| b0723 | sdhA | -1.0 | -6.1 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b4595 | yciY | -1.0 | -2.0 | hypothetical protein (RefSeq) | compare |
| b0178 | hlpA | -1.0 | -2.9 | periplasmic chaperone (NCBI) | compare |
| b3052 | rfaE | -1.0 | -3.2 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4246 | pyrL | -0.9 | -2.1 | pyrBI operon leader peptide (NCBI) | compare |
| b2114 | metG | -0.9 | -1.3 | methionyl-tRNA synthetase (NCBI) | compare |
| b0737 | tolQ | -0.9 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2512 | yfgL | -0.9 | -3.3 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3613 | yibP | -0.9 | -1.6 | putative membrane protein (VIMSS) | compare |
| b2038 | rfbC | -0.9 | -4.0 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b1187 | fadR | -0.9 | -2.8 | fatty acid metabolism regulator (NCBI) | compare |
| b3237 | argR | -0.9 | -2.6 | arginine repressor (NCBI) | compare |
| b4598 | yncL | -0.9 | -1.9 | hypothetical protein (RefSeq) | compare |
| b3794 | rffM | -0.9 | -4.6 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3169 | nusA | -0.9 | -1.9 | transcription elongation factor NusA (NCBI) | compare |
| b1594 | dgsA | -0.9 | -2.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1259 | yciG | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3619 | rfaD | -0.9 | -2.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1731 | cedA | -0.9 | -2.1 | cell division modulator (RefSeq) | compare |
| b1382 | ynbE | -0.9 | -1.3 | predicted lipoprotein (NCBI) | compare |
| b3806 | cyaA | -0.9 | -3.0 | adenylate cyclase (NCBI) | compare |
| b1919 | yedO | -0.9 | -2.6 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b1642 | slyA | -0.9 | -1.1 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0092 | ddlB | -0.8 | -3.3 | D-alanylalanine synthetase (NCBI) | compare |
| b0082 | mraW | -0.8 | -1.9 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2617 | smpA | -0.8 | -1.8 | small membrane protein A (VIMSS) | compare |
| b1573 | ydfC | -0.8 | -1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b0632 | dacA | -0.8 | -4.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1877 | yecT | -0.8 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0641 | rlpB | -0.8 | -1.7 | minor lipoprotein (NCBI) | compare |
| b1984 | asnW | -0.8 | -1.0 | tRNA-Asn (NCBI) | compare |
| b4655 | ythA | -0.8 | -1.0 | expressed protein (RefSeq) | compare |
| b2445 | yffN | -0.8 | -2.2 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2288 | nuoA | -0.8 | -1.8 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3911 | cpxA | -0.8 | -5.2 | two-component sensor protein (NCBI) | compare |
| b0864 | artP | -0.8 | -2.2 | arginine transporter subunit (NCBI) | compare |
| b1195 | ymgE | -0.8 | -2.1 | predicted inner membrane protein (NCBI) | compare |
| b1540 | ydfH | -0.8 | -1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4242 | mgtA | -0.8 | -4.5 | magnesium transporter (NCBI) | compare |
| b1762 | b1762 | -0.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3628 | rfaB | -0.8 | -4.0 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b1514 | lsrC | -0.8 | -1.1 | AI2 transporter (NCBI) | compare |
| b3629 | rfaS | -0.8 | -1.5 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2808 | gcvA | -0.8 | -2.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1605 | ydgI | -0.8 | -2.7 | predicted arginine/ornithine antiporter transporter (NCBI) | compare |
| b2189 | proL | -0.8 | -1.2 | tRNA-Pro (NCBI) | compare |
| b0722 | sdhD | -0.7 | -1.9 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2110 | yehC | -0.7 | -0.5 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b2277 | nuoM | -0.7 | -2.8 | NADH dehydrogenase subunit M (NCBI) | compare |
| b4557 | yidD | -0.7 | -2.1 | hypothetical protein (NCBI) | compare |
| b3609 | secB | -0.7 | -2.2 | export protein SecB (NCBI) | compare |
| b2893 | dsbC | -0.7 | -3.4 | protein disulfide isomerase II (NCBI) | compare |
| b1079 | flgH | -0.7 | -2.1 | flagellar L-ring protein precursor H (NCBI) | compare |
| b4570 | lomR | -0.7 | -1.0 | no description | compare |
| b3728 | pstS | -0.7 | -1.1 | phosphate transporter subunit (NCBI) | compare |
| b0627 | tatE | -0.7 | -1.1 | twin arginine translocase protein E (NCBI) | compare |
| b2276 | nuoN | -0.7 | -2.5 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3131 | agaR | -0.7 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3870 | glnA | -0.7 | -1.3 | glutamine synthetase (NCBI) | compare |
| b1575 | dicB | -0.7 | -1.0 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0706 | ybfD | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b1954 | dsrA | -0.7 | -1.4 | regulatory antisense RNA (NCBI) | compare |
| b1103 | ycfF | -0.7 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1278 | pgpB | -0.7 | -1.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2393 | nupC | -0.7 | -3.2 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b2504 | yfgG | -0.7 | -0.4 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b3164 | pnp | -0.7 | -1.2 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0460 | hha | -0.7 | -1.7 | modulator of gene expression, with H-NS (NCBI) | compare |
| b1219 | ychN | -0.7 | -2.0 | hypothetical protein (NCBI) | compare |
| b3203 | yhbH | -0.7 | -2.3 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b3726 | pstA | -0.7 | -2.2 | phosphate transporter subunit (NCBI) | compare |
| b1951 | rcsA | -0.7 | -0.4 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b2498 | upp | -0.7 | -1.2 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1583 | ynfB | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| b3101 | yqjF | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | -0.6 | -1.2 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4640 | yoeG | -0.6 | -0.9 | no description | compare |
| b2278 | nuoL | -0.6 | -3.7 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1607 | ydgC | -0.6 | -1.0 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b3787 | rffD | -0.6 | -4.1 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1523 | yneG | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b4493 | gapC | -0.6 | -1.3 | no description | compare |
| b0125 | hpt | -0.6 | -2.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2807 | ygdD | -0.6 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b1330 | ynaI | -0.6 | -1.7 | conserved inner membrane protein (NCBI) | compare |
| b2945 | endA | -0.6 | -3.0 | DNA-specific endonuclease I (NCBI) | compare |
| b4025 | pgi | -0.6 | -3.3 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1335 | ogt | -0.6 | -1.4 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b2215 | ompC | -0.6 | -3.5 | outer membrane porin protein C (NCBI) | compare |
| b0222 | lpcA | -0.6 | -1.2 | phosphoheptose isomerase (NCBI) | compare |
| b2287 | nuoB | -0.6 | -1.6 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2683 | ygaH | -0.6 | -3.5 | predicted inner membrane protein (NCBI) | compare |
| b4503 | yafF | -0.6 | -0.5 | no description | compare |
| b0857 | potI | -0.6 | -1.9 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1161 | ycgX | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b2623 | yfjH | -0.6 | -2.0 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b2579 | yfiD | -0.6 | -1.1 | pyruvate formate lyase subunit (NCBI) | compare |
| b0688 | pgm | -0.6 | -1.3 | phosphoglucomutase (NCBI) | compare |
| b0890 | ftsK | -0.6 | -0.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2350 | yfdG | -0.6 | -3.0 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b3979 | thrT | -0.6 | -0.3 | tRNA-Thr (NCBI) | compare |
| b1253 | yciA | -0.6 | -1.1 | predicted hydrolase (NCBI) | compare |
| b4410 | ecnA | -0.6 | -1.0 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |