Experiment set8IT077 for Agrobacterium fabrum C58

Compare to:

Parafilmed volatile agar plate with no fungus

200 most important genes:

  gene name fitness t score description  
Atu4317 -3.6 -3.0 TetR family transcriptional regulator compare
Atu0422 -3.3 -2.1 ABC transporter, membrane spanning protein compare
Atu0434 -3.2 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1810 -3.0 -0.9 hypothetical protein compare
Atu2125 -3.0 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu4773 -2.8 -1.2 two component response regulator compare
Atu2057 -2.8 -3.3 DNA helicase II compare
Atu0031 -2.7 -1.0 PTS system, IIA component compare
Atu1163 -2.3 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0769 -2.3 -1.8 protoheme IX farnesyltransferase compare
Atu0361 -2.2 -2.8 transcriptional regulator compare
Atu1874 -2.2 -3.2 RecA protein compare
Atu3763 -2.1 -1.4 hypothetical protein compare
Atu0986 -2.1 -1.1 hypothetical protein compare
Atu4418 -2.1 -3.2 glutaryl-CoA dehydrogenase compare
Atu1844 -2.0 -1.9 Phosphoribosylformylglycinamidine synthetase compare
Atu1850 -2.0 -2.5 phosphoribosylformylglycinamidine synthetase II compare
Atu3739 -1.9 -1.6 phosphoglycerate kinase compare
Atu0703 -1.9 -1.7 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0886 -1.9 -1.0 hypothetical protein compare
Atu5125 -1.9 -5.0 GntR family transcriptional regulator compare
Atu2439 -1.9 -1.1 hypothetical protein compare
Atu1760 -1.8 -1.0 hypothetical protein compare
Atu3754 -1.8 -3.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0842 -1.8 -1.0 hypothetical protein compare
Atu0999 -1.7 -6.7 magnesium transport protein compare
Atu1364 -1.7 -4.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1028 -1.7 -1.6 hypothetical protein compare
Atu8162 -1.6 -1.2 hypothetical protein compare
Atu0784 -1.6 -2.3 hypothetical protein compare
Atu0399 -1.6 -3.4 dihydroorotase compare
Atu0368 -1.6 -5.2 tRNA pseudouridine synthase I compare
Atu2728 -1.6 -3.2 beta (1-->2) glucan export ATP-binding protein compare
Atu1075 -1.6 -3.7 amidophosphoribosyltransferase compare
Atu3727 -1.6 -3.8 hypothetical protein compare
Atu8012 -1.6 -1.2 hypothetical protein compare
Atu4468 -1.5 -3.4 iron transport ABC transporter permease compare
Atu3730 -1.5 -0.9 hypothetical protein compare
Atu4470 -1.5 -4.8 iron ABC transporter ATPase compare
Atu0189 -1.4 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu6165 -1.4 -1.1 hypothetical protein compare
Atu2684 -1.4 -0.7 hypothetical protein compare
Atu3583 -1.3 -2.2 hypothetical protein compare
Atu2532 -1.3 -3.2 transcriptional regulator, MarR family compare
Atu3910 -1.3 -4.2 LamB/YcsF family protein compare
Atu2052 -1.3 -5.0 hypothetical protein compare
Atu1446 -1.3 -1.3 two component response regulator compare
Atu1302 -1.3 -1.8 hypothetical protein compare
Atu3740 -1.3 -3.8 fructose bisphosphate aldolase compare
Atu0298 -1.3 -3.3 orotidine 5 compare
Atu0026 -1.3 -0.6 hypothetical protein compare
Atu1141 -1.3 -4.4 Phosphoribosylglycinamide synthetase compare
Atu8052 -1.2 -1.2 hypothetical protein compare
Atu0895 -1.2 -2.1 ABC transporter, substrate binding protein compare
Atu3095 -1.2 -2.4 hypothetical protein compare
Atu1701 -1.2 -1.1 protein-L-isoaspartate O-methyltransferase compare
Atu2620 -1.2 -0.9 hypothetical protein compare
Atu3757 -1.2 -1.5 hypothetical protein compare
Atu1417 -1.2 -4.3 enoyl-CoA hydratase compare
Atu3712 -1.2 -1.1 hypothetical protein compare
Atu0971 -1.2 -2.4 two component sensor kinase compare
Atu3162 -1.2 -4.5 LacI family transcriptional regulator compare
Atu5540 -1.2 -0.6 hypothetical protein compare
Atu1774 -1.2 -3.9 ABC transporter, substrate binding protein (peptide) compare
Atu0486 -1.2 -2.6 dihydroorotate dehydrogenase compare
Atu8082 -1.2 -1.3 hypothetical protein compare
Atu2798 -1.2 -2.9 precorrin-6y methyltransferase compare
Atu4217 -1.2 -0.6 TetR family transcriptional regulator compare
Atu5045 -1.1 -1.5 hypothetical protein compare
Atu2640 -1.1 -2.1 hypothetical protein compare
Atu8054 -1.1 -0.4 hypothetical protein compare
Atu2205 -1.1 -3.1 transcriptional regulator, MarR family compare
Atu8190 -1.1 -3.0 hypothetical protein compare
Atu0777 -1.1 -0.5 hypothetical protein compare
Atu1845 -1.1 -1.6 phosphoribosylformylglycinamidine synthase I compare
Atu4505 -1.1 -4.7 LacI family transcriptional regulator compare
Atu2207 -1.1 -2.6 two component sensor kinase compare
Atu4446 -1.1 -3.8 hypothetical protein compare
Atu3593 -1.1 -4.0 hypothetical protein compare
Atu4792 -1.1 -1.0 hypothetical protein compare
Atu1739 -1.1 -2.4 permease compare
Atu1099 -1.1 -3.7 hypothetical protein compare
Atu0050 -1.1 -3.9 two component response regulator compare
Atu2239 -1.1 -2.0 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1683 -1.1 -1.4 hypothetical protein compare
Atu1021 -1.0 -1.3 outer membrane protein compare
Atu2555 -1.0 -1.6 L-lysine 2,3-aminomutase compare
Atu0893 -1.0 -2.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0533 -1.0 -1.9 putative inhibitor of septum formation compare
Atu2729 -1.0 -1.6 hypothetical protein compare
Atu2083 -1.0 -2.3 DNA repair protein RecN compare
Atu3627 -1.0 -1.4 hypothetical protein compare
Atu6114 -1.0 -1.4 hypothetical protein compare
Atu1219 -1.0 -0.4 hypothetical protein compare
Atu0201 -1.0 -1.1 hypothetical protein compare
Atu3481 -1.0 -2.3 enoyl-CoA hydratase compare
Atu1475 -1.0 -1.4 hypothetical protein compare
Atu5160 -1.0 -1.7 transcriptional regulator protein compare
Atu0565 -1.0 -1.9 hypothetical protein compare
Atu6045 -0.9 -0.9 replication protein C compare
Atu5164 -0.9 -0.5 type IV secretion protein AvhB3 compare
Atu1333 -0.9 -1.7 outer membrane protein compare
Atu0346 -0.9 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2073 -0.9 -2.2 membrane protein compare
Atu1359 -0.9 -0.5 dnaK deletion suppressor protein compare
Atu4451 -0.9 -4.2 mannitol 2-dehydrogenase compare
Atu0322 -0.9 -2.8 enoyl CoA hydratase compare
Atu8047 -0.9 -2.2 hypothetical protein compare
Atu1189 -0.9 -1.7 hypothetical protein compare
Atu1241 -0.9 -0.9 hypothetical protein compare
Atu1449 -0.9 -4.8 potassium uptake protein compare
Atu4179 -0.9 -2.4 hypothetical protein compare
Atu0912 -0.9 -0.8 Na+/H+ antiporter compare
Atu0142 -0.9 -1.2 cytochrome o ubiquinol oxidase subunit II compare
Atu0470 -0.9 -1.0 hypothetical protein compare
Atu4099 -0.9 -3.6 hypothetical protein compare
Atu3145 -0.9 -3.1 pectin degradation protein compare
Atu5467 -0.9 -3.1 hypothetical protein compare
Atu0938 -0.9 -1.9 transcriptional regulator, MerR family compare
Atu0926 -0.9 -3.5 hypothetical protein compare
Atu3469 -0.9 -1.3 phosphoglyceromutase compare
Atu3647 -0.9 -1.8 hypothetical protein compare
Atu3443 -0.9 -1.8 hypothetical protein compare
Atu0401 -0.9 -1.5 fructokinase compare
Atu4200 -0.9 -1.4 hypothetical protein compare
Atu3892 -0.9 -1.8 hypothetical protein compare
Atu1258 -0.9 -3.1 ATP-dependent Clp protease, proteolytic subunit compare
Atu2831 -0.9 -2.6 glucose inhibited division protein A compare
Atu0463 -0.9 -2.3 hypothetical protein compare
Atu0762 -0.9 -1.3 hypothetical protein compare
Atu0647 -0.9 -2.6 phosphoribosylamine--glycine ligase compare
Atu2072 -0.8 -2.5 ribosomal protein L11 methyltransferase compare
Atu4215 -0.8 -2.1 cell division protein compare
Atu2800 -0.8 -1.6 precorrin-3B C17-methyltransferase compare
Atu1339 -0.8 -1.2 ribonuclease E compare
Atu1634 -0.8 -0.7 hypothetical protein compare
Atu3480 -0.8 -3.1 hydroxymethylglutaryl-CoA lyase compare
Atu1110 -0.8 -0.9 cytosol aminopeptidase compare
Atu3387 -0.8 -1.6 sigma factor compare
Atu3090 -0.8 -3.0 DNA polymerase III subunit epsilon compare
Atu2787 -0.8 -0.5 hypothetical protein compare
Atu8035 -0.8 -0.8 hypothetical protein compare
Atu4824 -0.8 -3.3 IclR family transcriptional regulator compare
Atu6131 -0.8 -2.8 TraR Antiactivator compare
Atu8096 -0.8 -0.8 hypothetical protein compare
Atu3472 -0.8 -2.3 2-oxoisovalerate dehydrogenase subunit beta compare
Atu5437 -0.8 -3.0 hypothetical protein compare
Atu1904 -0.8 -1.0 transcriptional regulator compare
Atu1565 -0.8 -1.6 serine acetyltransferase compare
Atu4471 -0.8 -2.2 ABC transporter substrate-binding protein compare
Atu8159 -0.8 -1.4 hypothetical protein compare
Atu1056 -0.8 -2.5 hypothetical protein compare
Atu2441 -0.8 -1.3 RNA methylase compare
Atu0502 -0.8 -2.9 acetyl-CoA acetyltransferase compare
Atu3121 -0.8 -0.6 cold shock protein compare
Atu0354 -0.8 -1.0 ferric uptake regulator compare
Atu2293 -0.8 -1.1 hypothetical protein compare
Atu2457 -0.8 -2.4 hypothetical protein compare
Atu1140 -0.8 -1.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1076 -0.7 -1.8 colicin V production protein compare
Atu8189 -0.7 -1.5 hypothetical protein compare
Atu5159 -0.7 -2.1 hypothetical protein compare
Atu3697 -0.7 -1.8 ATP-dependent protease LA 2 compare
Atu6160 -0.7 -2.6 conserved hypothetical protein compare
Atu4676 -0.7 -3.0 malate dehydrogenase compare
Atu1327 -0.7 -1.1 NADH-ubiquinone oxidoreductase compare
Atu1185 -0.7 -1.3 hypothetical protein compare
Atu0029 -0.7 -2.0 S-adenosylhomocysteine hydrolase compare
Atu3423 -0.7 -0.9 hypothetical protein compare
Atu0070 -0.7 -3.9 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu2117 -0.7 -2.6 lytic murein transglycosylase compare
Atu3289 -0.7 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu5430 -0.7 -0.5 hypothetical protein compare
Atu4108 -0.7 -2.3 ribonuclease D compare
Atu0577 -0.7 -1.8 FLAF protein compare
Atu4144 -0.7 -0.5 hypothetical protein compare
Atu0421 -0.7 -0.5 ABC transporter, membrane spanning protein compare
Atu1619 -0.7 -1.5 protein-export membrane protein SECG compare
Atu0086 -0.7 -0.3 ribosome-binding factor A compare
Atu4567 -0.7 -2.6 ROK family transcriptional regulator compare
Atu4040 -0.7 -1.6 hypothetical protein compare
Atu1308 -0.7 -2.0 aspartate carbamoyl transferase catalytic subunit compare
Atu4506 -0.7 -2.7 hypothetical protein compare
Atu0578 -0.7 -2.7 FlbT post-transcriptional regulator of flagellin compare
Atu1307 -0.7 -1.3 dihydroorotase compare
Atu4514 -0.7 -1.9 RpiR family transcriptional regulator compare
Atu3755 -0.7 -1.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0190 -0.7 -3.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3609 -0.7 -2.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1204 -0.7 -2.5 potassium uptake protein compare
Atu2286 -0.7 -0.6 hypothetical protein compare
Atu2115 -0.7 -2.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2768 -0.7 -2.1 hypothetical protein compare
Atu2217 -0.7 -2.1 hypothetical protein compare
Atu2221 -0.7 -2.3 Lipid A biosynthesis protein compare
Atu8040 -0.7 -2.0 hypothetical protein compare
Atu0943 -0.7 -0.8 hypothetical protein compare
Atu1422 -0.7 -3.2 transcriptional regulator, MarR family compare
Atu3913 -0.7 -2.7 biotin carboxylase compare
Atu4825 -0.7 -2.1 dehydrogenase compare


Specific Phenotypes

For 1 genes in this experiment