Experiment set8IT067 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu0346 -2.7 -4.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2728 -2.3 -8.1 beta (1-->2) glucan export ATP-binding protein compare
Atu0434 -2.0 -3.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3469 -1.9 -2.8 phosphoglyceromutase compare
Atu6098 -1.7 -0.9 transcriptional regulator, HTH family compare
Atu1688 -1.7 -8.4 indole-3-glycerol-phosphate synthase compare
Atu0188 -1.7 -4.3 ABC transporter, membrane spanning protein (peptide) compare
Atu6036 -1.7 -1.2 entry-exclusion protein compare
Atu2289 -1.6 -11.1 anthranilate synthase component I and II compare
Atu1687 -1.6 -8.3 anthranilate phosphoribosyltransferase compare
Atu0017 -1.6 -3.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0189 -1.5 -4.3 ABC transporter, membrane spanning protein (peptide) compare
Atu1446 -1.5 -2.3 two component response regulator compare
Atu1470 -1.5 -2.1 Camphor resistance protein compare
Atu0999 -1.4 -7.8 magnesium transport protein compare
Atu3750 -1.3 -4.1 thiamine-phosphate pyrophosphorylase compare
Atu0298 -1.2 -3.9 orotidine 5 compare
Atu0986 -1.2 -1.8 hypothetical protein compare
Atu3739 -1.2 -2.4 phosphoglycerate kinase compare
Atu1850 -1.2 -4.9 phosphoribosylformylglycinamidine synthetase II compare
Atu0190 -1.2 -5.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0486 -1.2 -3.9 dihydroorotate dehydrogenase compare
Atu0040 -1.2 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1308 -1.1 -3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu4317 -1.1 -3.4 TetR family transcriptional regulator compare
Atu1810 -1.1 -1.8 hypothetical protein compare
Atu3429 -1.1 -1.8 hypothetical protein compare
Atu3754 -1.0 -4.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0533 -1.0 -2.6 putative inhibitor of septum formation compare
Atu0795 -1.0 -2.5 hypothetical protein compare
Atu0971 -1.0 -3.5 two component sensor kinase compare
Atu2040 -1.0 -3.7 phosphoserine phosphatase compare
Atu1774 -1.0 -4.7 ABC transporter, substrate binding protein (peptide) compare
Atu3518 -1.0 -6.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2113 -0.9 -2.2 N-acetylmuramoyl-L-alanine amidase compare
Atu0400 -0.9 -2.8 orotate phosphoribosyltransferase compare
Atu1844 -0.9 -2.1 Phosphoribosylformylglycinamidine synthetase compare
Atu0399 -0.9 -3.8 dihydroorotase compare
Atu2640 -0.9 -3.4 hypothetical protein compare
Atu0925 -0.9 -2.7 hypothetical protein compare
Atu4108 -0.9 -6.3 ribonuclease D compare
Atu6165 -0.9 -0.9 hypothetical protein compare
Atu2083 -0.8 -2.4 DNA repair protein RecN compare
Atu0647 -0.8 -3.0 phosphoribosylamine--glycine ligase compare
Atu2183 -0.8 -5.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1075 -0.8 -4.2 amidophosphoribosyltransferase compare
Atu0031 -0.8 -1.1 PTS system, IIA component compare
Atu1364 -0.8 -4.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1904 -0.8 -2.3 transcriptional regulator compare
Atu6112 -0.8 -2.3 conserved hypothetical protein compare
Atu8047 -0.8 -2.3 hypothetical protein compare
Atu1686 -0.8 -5.9 peptidyl-prolyl cis-trans isomerse D compare
Atu2052 -0.8 -4.7 hypothetical protein compare
Atu1685 -0.7 -1.0 hypothetical protein compare
Atu4346 -0.7 -3.6 hypothetical protein compare
Atu1030 -0.7 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0769 -0.7 -1.9 protoheme IX farnesyltransferase compare
Atu3730 -0.7 -1.7 hypothetical protein compare
Atu5125 -0.7 -2.3 GntR family transcriptional regulator compare
Atu3763 -0.7 -1.2 hypothetical protein compare
Atu1891 -0.7 -2.4 cobalamin biosynthesis protein compare
Atu1028 -0.7 -1.7 hypothetical protein compare
Atu3759 -0.7 -1.4 hypothetical protein compare
Atu4711 -0.7 -2.3 two component sensor kinase compare
Atu1307 -0.6 -2.7 dihydroorotase compare
Atu3014 -0.6 -1.6 hypothetical protein compare
Atu8162 -0.6 -1.1 hypothetical protein compare
Atu0464 -0.6 -4.0 hypothetical protein compare
Atu1189 -0.6 -1.7 hypothetical protein compare
Atu8057 -0.6 -1.9 hypothetical protein compare
Atu3006 -0.6 -3.2 hypothetical protein compare
Atu5437 -0.6 -2.5 hypothetical protein compare
Atu4896 -0.6 -1.5 acetyltransferase compare
Atu1021 -0.6 -1.7 outer membrane protein compare
Atu0135 -0.6 -1.7 uracil phosphoribosyltransferase compare
Atu5160 -0.6 -1.4 transcriptional regulator protein compare
Atu0540 -0.6 -1.5 hypothetical protein compare
Atu2489 -0.6 -3.5 hypothetical protein compare
Atu0142 -0.6 -1.3 cytochrome o ubiquinol oxidase subunit II compare
Atu4075 -0.6 -3.8 glycogen synthase compare
Atu1845 -0.6 -2.8 phosphoribosylformylglycinamidine synthase I compare
Atu0941 -0.6 -0.7 hypothetical protein compare
Atu1542 -0.6 -2.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0520 -0.6 -2.6 chemotaxis receiver protein compare
Atu4618 -0.6 -3.7 dTDP-rhamnose-3,5-epimerase compare
Atu4873 -0.6 -4.0 TetR family transcriptional regulator compare
Atu0692 -0.6 -3.9 glutathione-regulated potassium-efflux system protein compare
Atu4215 -0.6 -2.9 cell division protein compare
Atu2710 -0.6 -3.7 hypothetical protein compare
Atu0419 -0.6 -1.2 two component sensor kinase compare
Atu1736 -0.5 -4.4 manganese transport protein compare
Atu0926 -0.5 -1.8 hypothetical protein compare
Atu1141 -0.5 -2.3 Phosphoribosylglycinamide synthetase compare
Atu5470 -0.5 -0.8 hypothetical protein compare
Atu1149 -0.5 -1.2 adenylate cyclase compare
Atu1874 -0.5 -1.3 RecA protein compare
Atu2116 -0.5 -2.5 hypothetical protein compare
Atu1457 -0.5 -1.6 hypothetical protein compare
Atu3011 -0.5 -2.7 ArsR family transcriptional regulator compare
Atu2620 -0.5 -1.0 hypothetical protein compare
Atu3120 -0.5 -0.7 hypothetical protein compare
Atu2554 -0.5 -1.2 lysyl-tRNA synthetase compare
Atu0353 -0.5 -3.0 acetyltransferase compare
Atu6045 -0.5 -0.8 replication protein C compare
Atu5109 -0.5 -1.3 conjugal transfer protein compare
Atu2335 -0.5 -1.5 hypothetical protein compare
Atu3353 -0.5 -3.5 mannose-1-phosphate guanylyltransferase compare
Atu3311 -0.5 -4.4 phosphomannose isomerase compare
Atu3036 -0.5 -2.2 dipeptide ABC transporter permease compare
Atu6189 -0.5 -0.4 protein secretion chaperone compare
Atu0977 -0.5 -2.2 serine protease DO-like protease compare
Atu8128 -0.5 -2.5 putative bacteriophage P2 tail protein compare
Atu0815 -0.5 -1.6 hypothetical protein compare
Atu0468 -0.5 -3.7 hypothetical protein compare
Atu3780 -0.5 -2.4 hypothetical protein compare
Atu2368 -0.5 -0.9 hypothetical protein compare
Atu6153 -0.5 -1.7 conserved hypothetical protein compare
Atu0876 -0.5 -0.8 superoxide dismutase compare
Atu5511 -0.5 -1.6 hypothetical protein compare
Atu3012 -0.5 -1.0 hypothetical protein compare
Atu1140 -0.5 -2.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3492 -0.5 -2.7 sugar kinase compare
Atu1589 -0.5 -2.7 aminotransferase, class I compare
Atu1677 -0.5 -1.8 queuine tRNA-ribosyltransferase compare
Atu1103 -0.5 -1.9 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3634 -0.5 -2.0 penicillin-binding protein dacf precursor compare
Atu3674 -0.5 -1.6 hypothetical protein compare
Atu0467 -0.5 -2.8 hypothetical protein compare
Atu0718 -0.5 -2.1 hypothetical protein compare
Atu2464 -0.5 -1.5 formyltetrahydrofolate deformylase compare
Atu2045 -0.5 -3.2 HFLK protein compare
Atu4166 -0.5 -1.3 UDP-glucose 4-epimerase compare
Atu2073 -0.5 -2.6 membrane protein compare
Atu5492 -0.5 -2.5 hypothetical protein compare
Atu5078 -0.5 -2.9 LacI family transcription regulator compare
Atu4840 -0.5 -2.3 hypothetical protein compare
Atu3017 -0.5 -1.0 phosphoglyceromutase compare
Atu0565 -0.5 -2.5 hypothetical protein compare
Atu0103 -0.5 -3.3 penicillin-binding protein compare
Atu0479 -0.5 -3.0 ABC transporter, substrate binding protein (amino acid) compare
Atu3519 -0.5 -3.0 peptidyl-prolyl cis-trans isomerase compare
Atu4889 -0.5 -2.7 hypothetical protein compare
Atu0566 -0.5 -0.8 hypothetical protein compare
Atu3668 -0.5 -1.8 siderophore biosynthesis protein compare
Atu1076 -0.5 -1.8 colicin V production protein compare
Atu3755 -0.5 -2.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0079 -0.5 -2.8 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu1110 -0.5 -1.5 cytosol aminopeptidase compare
Atu3015 -0.4 -2.8 hypothetical protein compare
Atu1838 -0.4 -2.6 ABC transporter, substrate binding protein (amino acid) compare
Atu1072 -0.4 -2.3 hypothetical protein compare
Atu5545 -0.4 -1.2 hypothetical protein compare
Atu3018 -0.4 -1.8 hypothetical protein compare
Atu0723 -0.4 -0.8 FAD dependent oxidoreductase compare
Atu0167 -0.4 -2.7 transcriptional regulator, AraC family compare
Atu5515 -0.4 -1.9 hypothetical protein compare
Atu8017 -0.4 -1.3 hypothetical protein compare
Atu2057 -0.4 -1.4 DNA helicase II compare
Atu1439 -0.4 -0.9 hypothetical protein compare
Atu3999 -0.4 -1.4 dithiobiotin synthetase compare
Atu3016 -0.4 -2.1 phosphoglyceromutase compare
Atu0184 -0.4 -1.0 glucokinase compare
Atu2436 -0.4 -2.3 hypothetical protein compare
Atu2293 -0.4 -1.0 hypothetical protein compare
Atu0912 -0.4 -0.8 Na+/H+ antiporter compare
Atu2063 -0.4 -1.0 hypothetical protein compare
Atu8117 -0.4 -1.6 hypothetical protein compare
Atu5449 -0.4 -1.3 heat-shock protein compare
Atu1573 -0.4 -0.8 hypothetical protein compare
Atu1336 -0.4 -2.1 hypothetical protein compare
Atu0039 -0.4 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu1137 -0.4 -1.9 NTP pyrophosphohydrolase, MutT family compare
Atu0344 -0.4 -2.3 hypothetical protein compare
Atu1513 -0.4 -2.3 ABC excinuclease subunit A compare
Atu5534 -0.4 -2.5 ABC transporter nucleotide binding/ATPase compare
Atu5512 -0.4 -1.8 hypothetical protein compare
Atu0269 -0.4 -1.8 exodeoxyribonuclease VII large subunit compare
Atu2286 -0.4 -0.7 hypothetical protein compare
Atu2792 -0.4 -2.8 hypothetical protein compare
Atu4879 -0.4 -2.3 hypothetical protein compare
Atu5438 -0.4 -1.9 3-oxoacyl-ACP reductase compare
Atu3706 -0.4 -2.6 D-3-phosphoglycerate dehydrogenase compare
Atu1836 -0.4 -1.3 hypothetical protein compare
Atu1203 -0.4 -1.5 hypothetical protein compare
Atu4614 -0.4 -2.1 glycosyltransferase compare
Atu0859 -0.4 -1.2 hypothetical protein compare
Atu0361 -0.4 -1.0 transcriptional regulator compare
Atu0972 -0.4 -1.9 lipA protein compare
Atu4892 -0.4 -3.3 hypothetical protein compare
Atu6149 -0.4 -1.4 hypothetical protein compare
Atu2548 -0.4 -2.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3029 -0.4 -2.6 glucarate dehydratase compare
Atu1301 -0.4 -1.0 hypothetical protein compare
Atu0681 -0.4 -2.0 hypothetical protein compare
Atu2125 -0.4 -0.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0997 -0.4 -2.2 hypothetical protein compare
Atu0638 -0.4 -1.1 hypothetical protein compare
Atu4887 -0.4 -2.0 hypothetical protein compare
Atu0458 -0.4 -2.2 hypothetical protein compare
Atu3779 -0.4 -2.4 lytic murein transglycosylase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a control experiments