Experiment set8IT066 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu0017 -2.4 -5.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0434 -2.4 -4.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu5430 -2.2 -1.6 hypothetical protein compare
Atu3008 -2.0 -2.3 hypothetical protein compare
Atu4616 -1.9 -1.5 dTDP-4-dehydrorhamnose reductase compare
Atu0190 -1.8 -9.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3469 -1.7 -3.6 phosphoglyceromutase compare
Atu2728 -1.7 -6.4 beta (1-->2) glucan export ATP-binding protein compare
Atu4317 -1.6 -3.3 TetR family transcriptional regulator compare
Atu1850 -1.6 -3.8 phosphoribosylformylglycinamidine synthetase II compare
Atu1687 -1.5 -9.5 anthranilate phosphoribosyltransferase compare
Atu1307 -1.5 -4.4 dihydroorotase compare
Atu1688 -1.5 -5.9 indole-3-glycerol-phosphate synthase compare
Atu0346 -1.5 -2.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu6165 -1.4 -1.4 hypothetical protein compare
Atu2289 -1.4 -9.9 anthranilate synthase component I and II compare
Atu0999 -1.4 -7.1 magnesium transport protein compare
Atu0422 -1.4 -1.3 ABC transporter, membrane spanning protein compare
Atu0298 -1.3 -4.8 orotidine 5 compare
Atu3120 -1.3 -1.6 hypothetical protein compare
Atu6098 -1.3 -0.7 transcriptional regulator, HTH family compare
Atu0189 -1.3 -4.5 ABC transporter, membrane spanning protein (peptide) compare
Atu0184 -1.3 -2.7 glucokinase compare
Atu0971 -1.3 -4.4 two component sensor kinase compare
Atu1845 -1.3 -3.6 phosphoribosylformylglycinamidine synthase I compare
Atu0486 -1.3 -3.8 dihydroorotate dehydrogenase compare
Atu1810 -1.2 -1.6 hypothetical protein compare
Atu1844 -1.2 -2.0 Phosphoribosylformylglycinamidine synthetase compare
Atu0941 -1.1 -1.3 hypothetical protein compare
Atu5475 -1.1 -1.9 hypothetical protein compare
Atu1308 -1.1 -4.5 aspartate carbamoyl transferase catalytic subunit compare
Atu3518 -1.1 -5.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1774 -1.1 -5.4 ABC transporter, substrate binding protein (peptide) compare
Atu4711 -1.1 -3.4 two component sensor kinase compare
Atu0471 -0.9 -4.4 hypothetical protein compare
Atu0188 -0.9 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu2057 -0.9 -2.4 DNA helicase II compare
Atu1075 -0.9 -3.5 amidophosphoribosyltransferase compare
Atu0842 -0.9 -2.1 hypothetical protein compare
Atu1030 -0.9 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3754 -0.8 -2.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1686 -0.8 -6.3 peptidyl-prolyl cis-trans isomerse D compare
Atu1734 -0.8 -2.3 hypothetical protein compare
Atu1475 -0.8 -3.3 hypothetical protein compare
Atu0647 -0.8 -3.4 phosphoribosylamine--glycine ligase compare
Atu0399 -0.8 -3.0 dihydroorotase compare
Atu0464 -0.8 -4.9 hypothetical protein compare
Atu0533 -0.8 -2.3 putative inhibitor of septum formation compare
Atu2040 -0.8 -4.2 phosphoserine phosphatase compare
Atu2113 -0.8 -2.8 N-acetylmuramoyl-L-alanine amidase compare
Atu0400 -0.8 -3.0 orotate phosphoribosyltransferase compare
Atu5045 -0.8 -1.1 hypothetical protein compare
Atu0861 -0.8 -1.6 hypothetical protein compare
Atu0986 -0.8 -1.3 hypothetical protein compare
Atu1446 -0.7 -1.7 two component response regulator compare
Atu4346 -0.7 -5.2 hypothetical protein compare
Atu0846 -0.7 -2.7 transcriptional regulator, MarR family compare
Atu1028 -0.7 -2.1 hypothetical protein compare
Atu6045 -0.7 -0.9 replication protein C compare
Atu4075 -0.7 -3.9 glycogen synthase compare
Atu5160 -0.7 -1.0 transcriptional regulator protein compare
Atu5164 -0.7 -0.6 type IV secretion protein AvhB3 compare
Atu3706 -0.7 -3.5 D-3-phosphoglycerate dehydrogenase compare
Atu2183 -0.7 -3.6 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0883 -0.7 -1.7 hypothetical protein compare
Atu0692 -0.7 -4.3 glutathione-regulated potassium-efflux system protein compare
Atu2052 -0.7 -3.5 hypothetical protein compare
Atu1685 -0.7 -1.0 hypothetical protein compare
Atu3763 -0.7 -0.9 hypothetical protein compare
Atu3018 -0.7 -2.6 hypothetical protein compare
Atu5534 -0.7 -3.6 ABC transporter nucleotide binding/ATPase compare
Atu0769 -0.7 -1.8 protoheme IX farnesyltransferase compare
Atu0201 -0.7 -1.7 hypothetical protein compare
Atu1364 -0.6 -2.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3519 -0.6 -3.7 peptidyl-prolyl cis-trans isomerase compare
Atu1470 -0.6 -1.1 Camphor resistance protein compare
Atu3031 -0.6 -1.3 hypothetical protein compare
Atu3798 -0.6 -2.5 TetR family transcriptional regulator compare
Atu1141 -0.6 -3.8 Phosphoribosylglycinamide synthetase compare
Atu5142 -0.6 -0.9 hypothetical protein compare
Atu2335 -0.6 -1.8 hypothetical protein compare
Atu4108 -0.6 -3.2 ribonuclease D compare
Atu3012 -0.6 -1.4 hypothetical protein compare
Atu1566 -0.6 -1.0 hypothetical protein compare
Atu4869 -0.6 -2.8 hypothetical protein compare
Atu0953 -0.6 -0.8 hypothetical protein compare
Atu0269 -0.6 -2.6 exodeoxyribonuclease VII large subunit compare
Atu0086 -0.6 -0.8 ribosome-binding factor A compare
Atu4840 -0.6 -3.6 hypothetical protein compare
Atu3015 -0.6 -3.0 hypothetical protein compare
Atu1508 -0.6 -3.2 hypothetical protein compare
Atu2116 -0.6 -1.8 hypothetical protein compare
Atu1874 -0.6 -1.5 RecA protein compare
Atu3001 -0.6 -2.2 hypothetical protein compare
Atu4166 -0.6 -1.1 UDP-glucose 4-epimerase compare
Atu3016 -0.6 -3.3 phosphoglyceromutase compare
Atu6030 -0.6 -2.3 ORF13 hypothetical protein compare
Atu0479 -0.6 -4.2 ABC transporter, substrate binding protein (amino acid) compare
Atu3730 -0.6 -0.6 hypothetical protein compare
Atu5468 -0.6 -1.1 hypothetical protein compare
Atu4773 -0.6 -0.7 two component response regulator compare
Atu0386 -0.6 -1.3 hypothetical protein compare
Atu0598 -0.6 -3.9 phosphogluconate dehydratase compare
Atu0926 -0.5 -2.1 hypothetical protein compare
Atu0520 -0.5 -2.7 chemotaxis receiver protein compare
Atu0353 -0.5 -3.5 acetyltransferase compare
Atu3727 -0.5 -1.8 hypothetical protein compare
Atu2207 -0.5 -2.1 two component sensor kinase compare
Atu2041 -0.5 -0.9 acetyltransferase compare
Atu4894 -0.5 -3.4 transposase compare
Atu4873 -0.5 -3.8 TetR family transcriptional regulator compare
Atu3739 -0.5 -1.8 phosphoglycerate kinase compare
Atu0103 -0.5 -4.1 penicillin-binding protein compare
Atu1140 -0.5 -1.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4677 -0.5 -0.9 hypothetical protein compare
Atu1578 -0.5 -3.1 ABC transporter, membrane spanning protein (amino acid) compare
Atu1163 -0.5 -1.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3013 -0.5 -1.5 hypothetical protein compare
Atu3311 -0.5 -4.1 phosphomannose isomerase compare
Atu0361 -0.5 -1.5 transcriptional regulator compare
Atu8126 -0.5 -3.5 putative phage tail protein I compare
Atu5102 -0.5 -1.8 hypothetical protein compare
Atu0540 -0.5 -2.1 hypothetical protein compare
Atu4874 -0.5 -3.1 hypothetical protein compare
Atu2163 -0.5 -1.0 hypothetical protein compare
Atu8096 -0.5 -1.2 hypothetical protein compare
Atu3289 -0.5 -2.5 thiamine-phosphate pyrophosphorylase compare
Atu3006 -0.5 -1.9 hypothetical protein compare
Atu4502 -0.5 -2.3 cobalamin synthesis protein compare
Atu8128 -0.5 -3.3 putative bacteriophage P2 tail protein compare
Atu4896 -0.5 -1.8 acetyltransferase compare
Atu1182 -0.5 -0.7 hypothetical protein compare
Atu3755 -0.5 -2.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu8202 -0.5 -2.2 hypothetical protein compare
Atu3634 -0.5 -1.7 penicillin-binding protein dacf precursor compare
Atu8196 -0.5 -2.8 hypothetical protein compare
Atu2710 -0.5 -3.3 hypothetical protein compare
Atu0026 -0.5 -0.6 hypothetical protein compare
Atu2737 -0.5 -2.4 oxidoredutase compare
Atu0468 -0.5 -3.2 hypothetical protein compare
Atu0142 -0.5 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu0703 -0.5 -1.4 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu4893 -0.5 -2.7 hypothetical protein compare
Atu0467 -0.5 -2.1 hypothetical protein compare
Atu0436 -0.5 -3.6 hypothetical protein compare
Atu0046 -0.5 -2.7 hypothetical protein compare
Atu4887 -0.5 -1.5 hypothetical protein compare
Atu4784 -0.5 -2.8 ABC transporter substrate-binding protein compare
Atu1056 -0.5 -2.5 hypothetical protein compare
Atu0885 -0.5 -1.7 hypothetical protein compare
Atu3353 -0.5 -3.4 mannose-1-phosphate guanylyltransferase compare
Atu8203 -0.5 -0.9 hypothetical protein compare
Atu4865 -0.4 -3.7 oxidoreductase compare
Atu5028 -0.4 -1.0 IS426 transposase compare
Atu2442 -0.4 -1.0 hypothetical protein compare
Atu0977 -0.4 -1.9 serine protease DO-like protease compare
Atu8039 -0.4 -2.2 hypothetical protein compare
Atu4617 -0.4 -2.4 dTDP-D-glucose-4,6-dehydratase compare
Atu1838 -0.4 -2.0 ABC transporter, substrate binding protein (amino acid) compare
Atu0453 -0.4 -3.0 hypothetical protein compare
Atu5186 -0.4 -0.9 hypothetical protein compare
Atu4418 -0.4 -2.0 glutaryl-CoA dehydrogenase compare
Atu0452 -0.4 -3.2 hypothetical protein compare
Atu3065 -0.4 -3.6 sugar ABC transporter permease compare
Atu2489 -0.4 -2.3 hypothetical protein compare
Atu0458 -0.4 -2.0 hypothetical protein compare
Atu0048 -0.4 -2.9 hypothetical protein compare
Atu4618 -0.4 -3.4 dTDP-rhamnose-3,5-epimerase compare
Atu3603 -0.4 -1.4 two component response regulator compare
Atu0354 -0.4 -1.1 ferric uptake regulator compare
Atu5115 -0.4 -0.7 hypothetical protein compare
Atu0322 -0.4 -2.0 enoyl CoA hydratase compare
Atu0723 -0.4 -0.6 FAD dependent oxidoreductase compare
Atu1849 -0.4 -2.5 hypothetical protein compare
Atu1904 -0.4 -1.4 transcriptional regulator compare
Atu3083 -0.4 -2.0 hypothetical protein compare
Atu3886 -0.4 -2.7 lysophospholipase compare
Atu5501 -0.4 -1.1 hypothetical protein compare
Atu4884 -0.4 -2.2 hypothetical protein compare
Atu3609 -0.4 -2.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0115 -0.4 -0.6 hypothetical protein compare
Atu3020 -0.4 -2.1 GntR family transcriptional regulator compare
Atu1076 -0.4 -1.8 colicin V production protein compare
Atu1518 -0.4 -2.1 transcriptional regulator, Fur family compare
Atu4095 -0.4 -1.3 hypothetical protein compare
Atu0535 -0.4 -1.8 hypothetical protein compare
Atu5512 -0.4 -1.9 hypothetical protein compare
Atu4831 -0.4 -2.6 hypothetical protein compare
Atu2286 -0.4 -1.0 hypothetical protein compare
Atu1577 -0.4 -1.7 ABC transporter, substrate binding protein (amino acid) compare
Atu3126 -0.4 -1.4 hypothetical protein compare
Atu1535 -0.4 -1.7 cytochrome c oxidase, FixQ chain compare
Atu0706 -0.4 -3.1 transcriptional regulator, IclR family compare
Atu1077 -0.4 -1.9 DNA repair protein compare
Atu2313 -0.4 -1.9 hypothetical protein compare
Atu3022 -0.4 -3.1 sugar ABC transporter permease compare
Atu1129 -0.4 -2.4 excinuclease ABC chain C compare
Atu5455 -0.4 -1.4 hypothetical protein compare
Atu8099 -0.4 -1.1 hypothetical protein compare
Atu1355 -0.4 -2.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a control experiments