| | gene | name | fitness | t score | description | |
|---|
| b0484 | copA | -4.6 | -10.7 | copper transporter (NCBI) | compare |
| b1677 | lpp | -3.9 | -2.6 | murein lipoprotein (NCBI) | compare |
| b3786 | rffE | -3.8 | -11.8 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3035 | tolC | -3.8 | -5.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3787 | rffD | -3.7 | -10.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3784 | rfe | -3.7 | -12.1 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0605 | ahpC | -3.6 | -3.5 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3794 | rffM | -3.6 | -7.5 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0080 | fruR | -3.5 | -5.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4481 | rffT | -3.4 | -5.2 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0677 | nagA | -3.4 | -2.3 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3791 | rffA | -3.3 | -5.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3764 | yifE | -3.2 | -4.9 | hypothetical protein (NCBI) | compare |
| b1830 | prc | -3.0 | -2.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b4046 | yjbK | -3.0 | -6.9 | putative regulator (VIMSS) | compare |
| b0463 | acrA | -3.0 | -11.4 | multidrug efflux system (NCBI) | compare |
| b2688 | gshA | -3.0 | -6.2 | glutamate--cysteine ligase (NCBI) | compare |
| b2553 | glnB | -2.9 | -5.4 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3790 | rffC | -2.9 | -4.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3468 | yhhN | -2.8 | -11.4 | conserved inner membrane protein (NCBI) | compare |
| b3163 | nlpI | -2.8 | -2.7 | hypothetical protein (NCBI) | compare |
| b2168 | fruK | -2.7 | -1.8 | 1-phosphofructokinase (NCBI) | compare |
| b3341 | rpsG | -2.7 | -1.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b1831 | proQ | -2.6 | -4.2 | putative solute/DNA competence effector (NCBI) | compare |
| b1185 | dsbB | -2.6 | -3.7 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2707 | srlR | -2.5 | -6.9 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b1684 | sufA | -2.5 | -3.2 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b3644 | yicC | -2.5 | -6.1 | hypothetical protein (NCBI) | compare |
| b0724 | sdhB | -2.5 | -7.3 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2531 | iscR | -2.4 | -1.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3631 | rfaG | -2.4 | -7.8 | glucosyltransferase I (NCBI) | compare |
| b1324 | tpx | -2.4 | -4.4 | thiol peroxidase (NCBI) | compare |
| b0722 | sdhD | -2.4 | -5.2 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b3860 | dsbA | -2.4 | -7.5 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3237 | argR | -2.4 | -3.2 | arginine repressor (NCBI) | compare |
| b2512 | yfgL | -2.4 | -5.5 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b1907 | tyrP | -2.4 | -5.2 | tyrosine transporter (NCBI) | compare |
| b3181 | greA | -2.3 | -4.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3842 | rfaH | -2.3 | -4.6 | transcriptional activator RfaH (NCBI) | compare |
| b2947 | gshB | -2.3 | -3.4 | glutathione synthetase (NCBI) | compare |
| b3803 | hemX | -2.3 | -10.2 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b3199 | yrbK | -2.2 | -3.0 | hypothetical protein (NCBI) | compare |
| b3908 | sodA | -2.2 | -6.6 | superoxide dismutase, manganese (VIMSS) | compare |
| b3632 | rfaQ | -2.2 | -13.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0462 | acrB | -2.2 | -7.9 | multidrug efflux system protein (NCBI) | compare |
| b0222 | lpcA | -2.2 | -2.0 | phosphoheptose isomerase (NCBI) | compare |
| b0059 | hepA | -2.1 | -13.4 | ATP-dependent helicase HepA (NCBI) | compare |
| b3630 | rfaP | -2.1 | -2.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2808 | gcvA | -2.1 | -2.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4480 | hdfR | -2.1 | -3.5 | transcriptional regulator HdfR (NCBI) | compare |
| b2278 | nuoL | -2.1 | -7.4 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2258 | b2258 | -2.1 | -1.7 | putative transport/receptor protein (VIMSS) | compare |
| b3621 | rfaC | -2.1 | -2.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1882 | cheY | -2.0 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3292 | zntR | -2.0 | -1.4 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b2282 | nuoH | -2.0 | -2.9 | NADH dehydrogenase subunit H (NCBI) | compare |
| b4178 | yjeB | -2.0 | -5.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3349 | slyD | -2.0 | -6.4 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b2617 | smpA | -1.9 | -2.9 | small membrane protein A (VIMSS) | compare |
| b2937 | speB | -1.9 | -6.0 | agmatinase (NCBI) | compare |
| b0082 | mraW | -1.9 | -2.8 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2280 | nuoJ | -1.9 | -4.9 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2276 | nuoN | -1.9 | -4.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1658 | purR | -1.9 | -5.6 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1506 | yneL | -1.9 | -1.2 | predicted transcriptional regulator (NCBI) | compare |
| b2392 | mntH | -1.9 | -7.5 | manganese transport protein MntH (NCBI) | compare |
| b0957 | ompA | -1.9 | -2.9 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4101 | phnG | -1.9 | -3.8 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b1861 | ruvA | -1.8 | -1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3469 | zntA | -1.8 | -2.2 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0738 | tolR | -1.8 | -2.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4191 | ulaR | -1.8 | -3.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3620 | rfaF | -1.8 | -2.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2318 | truA | -1.8 | -2.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0741 | pal | -1.8 | -2.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1382 | ynbE | -1.8 | -2.0 | predicted lipoprotein (NCBI) | compare |
| b0015 | dnaJ | -1.7 | -7.4 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b0014 | dnaK | -1.7 | -1.6 | molecular chaperone DnaK (NCBI) | compare |
| b0723 | sdhA | -1.7 | -9.2 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b2436 | hemF | -1.7 | -4.9 | coproporphyrinogen III oxidase (NCBI) | compare |
| b3414 | gntY | -1.7 | -4.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b2285 | nuoE | -1.7 | -2.4 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0053 | surA | -1.7 | -2.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1236 | galU | -1.7 | -2.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2288 | nuoA | -1.7 | -3.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3229 | sspA | -1.7 | -1.1 | stringent starvation protein A (NCBI) | compare |
| b2183 | rsuA | -1.6 | -3.3 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b3601 | mtlR | -1.6 | -5.6 | DNA-binding repressor (NCBI) | compare |
| b0429 | cyoD | -1.6 | -4.8 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b2029 | gnd | -1.6 | -5.9 | 6-phosphogluconate dehydrogenase (NCBI) | compare |
| b3390 | aroK | -1.6 | -1.1 | shikimate kinase I (NCBI) | compare |
| b0122 | yacC | -1.6 | -4.3 | orf, hypothetical protein (VIMSS) | compare |
| b3619 | rfaD | -1.6 | -1.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4701 | sokX | -1.6 | -1.0 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3250 | mreC | -1.6 | -2.2 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b0683 | fur | -1.6 | -1.4 | ferric uptake regulator (NCBI) | compare |
| b0688 | pgm | -1.6 | -1.8 | phosphoglucomutase (NCBI) | compare |
| b2287 | nuoB | -1.5 | -3.0 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0406 | tgt | -1.5 | -5.6 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b0125 | hpt | -1.5 | -4.1 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b0740 | tolB | -1.5 | -2.0 | translocation protein TolB precursor (NCBI) | compare |
| b1088 | yceD | -1.5 | -3.2 | hypothetical protein (NCBI) | compare |
| b2286 | nuoC | -1.5 | -4.5 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3726 | pstA | -1.5 | -3.1 | phosphate transporter subunit (NCBI) | compare |
| b3075 | ebgR | -1.5 | -4.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1104 | ycfL | -1.5 | -2.0 | hypothetical protein (NCBI) | compare |
| b1860 | ruvB | -1.5 | -0.9 | Holliday junction DNA helicase B (NCBI) | compare |
| b3627 | rfaI | -1.5 | -5.2 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b4139 | aspA | -1.5 | -6.8 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3742 | mioC | -1.5 | -4.8 | flavodoxin (NCBI) | compare |
| b1863 | ruvC | -1.4 | -1.8 | Holliday junction resolvase (NCBI) | compare |
| b0407 | yajC | -1.4 | -2.6 | preprotein translocase subunit YajC (NCBI) | compare |
| b3465 | yhhF | -1.4 | -5.1 | predicted methyltransferase (NCBI) | compare |
| b1908 | yecA | -1.4 | -5.4 | conserved metal-binding protein (NCBI) | compare |
| b2284 | nuoF | -1.4 | -3.2 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0737 | tolQ | -1.4 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4546 | ypeB | -1.4 | -1.1 | hypothetical protein (NCBI) | compare |
| b2283 | nuoG | -1.4 | -4.9 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2277 | nuoM | -1.4 | -4.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2279 | nuoK | -1.3 | -2.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1192 | ldcA | -1.3 | -4.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b3131 | agaR | -1.3 | -3.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3409 | feoB | -1.3 | -10.7 | ferrous iron transport protein B (NCBI) | compare |
| b3236 | mdh | -1.3 | -6.4 | malate dehydrogenase (NCBI) | compare |
| b4676 | yoaK | -1.3 | -0.8 | expressed protein (RefSeq) | compare |
| b1176 | minC | -1.3 | -2.7 | septum formation inhibitor (NCBI) | compare |
| b1575 | dicB | -1.3 | -1.6 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1573 | ydfC | -1.3 | -1.5 | Qin prophage; predicted protein (RefSeq) | compare |
| b2951 | yggS | -1.3 | -4.0 | predicted enzyme (NCBI) | compare |
| b2156 | lysP | -1.3 | -7.1 | lysine transporter (NCBI) | compare |
| b2704 | srlB | -1.2 | -2.2 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b3408 | feoA | -1.2 | -7.9 | ferrous iron transport protein A (NCBI) | compare |
| b0678 | nagB | -1.2 | -3.8 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b0912 | ihfB | -1.2 | -2.1 | integration host factor subunit beta (NCBI) | compare |
| b4384 | deoD | -1.2 | -6.6 | purine nucleoside phosphorylase (NCBI) | compare |
| b4232 | fbp | -1.2 | -7.4 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b3545 | proK | -1.2 | -1.9 | tRNA-Pro (NCBI) | compare |
| b4383 | deoB | -1.2 | -5.7 | phosphopentomutase (NCBI) | compare |
| b3961 | oxyR | -1.2 | -1.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3500 | gor | -1.2 | -1.1 | glutathione reductase (NCBI) | compare |
| b0730 | mngR | -1.2 | -0.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1563 | relE | -1.2 | -1.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b4595 | yciY | -1.2 | -1.8 | hypothetical protein (RefSeq) | compare |
| b0836 | yliH | -1.2 | -2.6 | hypothetical protein (NCBI) | compare |
| b3472 | b3472 | -1.2 | -4.9 | orf, hypothetical protein (VIMSS) | compare |
| b3195 | yrbF | -1.2 | -7.3 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0721 | sdhC | -1.2 | -3.6 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1253 | yciA | -1.2 | -3.0 | predicted hydrolase (NCBI) | compare |
| b0888 | trxB | -1.2 | -2.2 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4522 | yciX_1 | -1.2 | -2.1 | hypothetical protein (NCBI) | compare |
| b1989 | asnV | -1.2 | -2.1 | tRNA-Asn (NCBI) | compare |
| b2346 | vacJ | -1.2 | -5.5 | predicted lipoprotein (NCBI) | compare |
| b2113 | mrp | -1.2 | -4.2 | putative ATPase (VIMSS) | compare |
| b3026 | qseC | -1.1 | -1.1 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1531 | marA | -1.1 | -3.3 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b4171 | miaA | -1.1 | -1.9 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2897 | ygfY | -1.1 | -2.6 | hypothetical protein (NCBI) | compare |
| b1550 | b1550 | -1.1 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2906 | visC | -1.1 | -4.2 | hypothetical protein (NCBI) | compare |
| b4097 | phnK | -1.1 | -4.0 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b1109 | ndh | -1.1 | -2.7 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3226 | yhcK | -1.1 | -3.5 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b3752 | rbsK | -1.1 | -6.3 | ribokinase (NCBI) | compare |
| b1476 | fdnI | -1.1 | -0.8 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1348 | lar | -1.1 | -1.5 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3467 | yhhM | -1.1 | -3.7 | hypothetical protein (NCBI) | compare |
| b0145 | dksA | -1.1 | -1.7 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3410 | yhgG | -1.1 | -4.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0428 | cyoE | -1.1 | -4.8 | protoheme IX farnesyltransferase (NCBI) | compare |
| b3071 | yqjI | -1.1 | -2.4 | predicted transcriptional regulator (NCBI) | compare |
| b4202 | rpsR | -1.1 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b3807 | cyaY | -1.1 | -5.0 | frataxin-like protein (NCBI) | compare |
| b4102 | phnF | -1.1 | -4.3 | predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (NCBI) | compare |
| b2114 | metG | -1.1 | -1.5 | methionyl-tRNA synthetase (NCBI) | compare |
| b3871 | bipA | -1.1 | -5.7 | GTP-binding protein (NCBI) | compare |
| b1164 | ycgZ | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b3739 | atpI | -1.0 | -4.1 | membrane-bound ATP synthase, dispensable protein, affects expression of atpB (VIMSS) | compare |
| b4042 | dgkA | -1.0 | -0.7 | diacylglycerol kinase (NCBI) | compare |
| b3192 | yrbC | -1.0 | -5.9 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b4104 | phnE | -1.0 | -2.2 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b0092 | ddlB | -1.0 | -3.7 | D-alanylalanine synthetase (NCBI) | compare |
| b0765 | modC | -1.0 | -3.7 | molybdate transporter subunit (NCBI) | compare |
| b1582 | ynfA | -1.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b0430 | cyoC | -1.0 | -2.9 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b1346 | ydaQ | -1.0 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3628 | rfaB | -1.0 | -3.5 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b4045 | yjbJ | -1.0 | -1.6 | predicted stress response protein (NCBI) | compare |
| b0438 | clpX | -1.0 | -3.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1095 | fabF | -1.0 | -4.3 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1272 | sohB | -1.0 | -4.5 | predicted inner membrane peptidase (NCBI) | compare |
| b1252 | tonB | -1.0 | -1.8 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1090 | plsX | -1.0 | -3.1 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b1295 | ymjA | -1.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b3806 | cyaA | -1.0 | -2.9 | adenylate cyclase (NCBI) | compare |
| b3529 | yhjK | -1.0 | -7.3 | predicted diguanylate cyclase (RefSeq) | compare |
| b1728 | ydjM | -0.9 | -2.1 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b0249 | ykfF | -0.9 | -2.0 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b3398 | yrfF | -0.9 | -1.8 | predicted inner membrane protein (NCBI) | compare |
| b2388 | glk | -0.9 | -4.4 | glucokinase (NCBI) | compare |
| b2281 | nuoI | -0.9 | -1.6 | NADH dehydrogenase subunit I (NCBI) | compare |