| | gene | name | fitness | t score | description | |
|---|
| b0484 | copA | -4.1 | -9.5 | copper transporter (NCBI) | compare |
| b3764 | yifE | -3.4 | -3.3 | hypothetical protein (NCBI) | compare |
| b3961 | oxyR | -3.3 | -9.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0605 | ahpC | -3.2 | -3.0 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3784 | rfe | -3.1 | -10.8 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3794 | rffM | -3.1 | -6.5 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b4046 | yjbK | -3.0 | -5.3 | putative regulator (VIMSS) | compare |
| b0677 | nagA | -2.9 | -2.0 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3786 | rffE | -2.9 | -10.8 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3787 | rffD | -2.8 | -9.8 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3035 | tolC | -2.8 | -5.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3790 | rffC | -2.8 | -3.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3791 | rffA | -2.8 | -4.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2553 | glnB | -2.8 | -4.5 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b1677 | lpp | -2.6 | -2.5 | murein lipoprotein (NCBI) | compare |
| b4480 | hdfR | -2.6 | -4.7 | transcriptional regulator HdfR (NCBI) | compare |
| b2707 | srlR | -2.6 | -6.0 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b3803 | hemX | -2.5 | -9.0 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b2688 | gshA | -2.5 | -5.1 | glutamate--cysteine ligase (NCBI) | compare |
| b0247 | ykfG | -2.3 | -1.7 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b2279 | nuoK | -2.3 | -2.2 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0125 | hpt | -2.3 | -4.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b4481 | rffT | -2.3 | -5.2 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3468 | yhhN | -2.3 | -7.5 | conserved inner membrane protein (NCBI) | compare |
| b0080 | fruR | -2.3 | -5.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1830 | prc | -2.3 | -2.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0463 | acrA | -2.2 | -9.4 | multidrug efflux system (NCBI) | compare |
| b3341 | rpsG | -2.2 | -1.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b1607 | ydgC | -2.1 | -2.3 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1831 | proQ | -2.1 | -3.3 | putative solute/DNA competence effector (NCBI) | compare |
| b2947 | gshB | -2.1 | -2.8 | glutathione synthetase (NCBI) | compare |
| b3349 | slyD | -2.1 | -5.6 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b2531 | iscR | -2.0 | -1.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0082 | mraW | -2.0 | -2.3 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3163 | nlpI | -1.9 | -2.6 | hypothetical protein (NCBI) | compare |
| b3908 | sodA | -1.9 | -5.3 | superoxide dismutase, manganese (VIMSS) | compare |
| b3075 | ebgR | -1.9 | -4.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0912 | ihfB | -1.9 | -3.2 | integration host factor subunit beta (NCBI) | compare |
| b0059 | hepA | -1.9 | -10.5 | ATP-dependent helicase HepA (NCBI) | compare |
| b3860 | dsbA | -1.8 | -5.5 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0263 | afuB | -1.8 | -2.3 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b3842 | rfaH | -1.8 | -3.6 | transcriptional activator RfaH (NCBI) | compare |
| b3052 | rfaE | -1.8 | -2.9 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3131 | agaR | -1.8 | -3.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3199 | yrbK | -1.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b1550 | b1550 | -1.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2808 | gcvA | -1.7 | -1.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0462 | acrB | -1.7 | -11.0 | multidrug efflux system protein (NCBI) | compare |
| b0722 | sdhD | -1.7 | -3.9 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.8 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0724 | sdhB | -1.7 | -5.4 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1739 | osmE | -1.7 | -2.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b2258 | b2258 | -1.7 | -1.4 | putative transport/receptor protein (VIMSS) | compare |
| b4178 | yjeB | -1.6 | -4.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0014 | dnaK | -1.6 | -1.1 | molecular chaperone DnaK (NCBI) | compare |
| b0222 | lpcA | -1.6 | -1.5 | phosphoheptose isomerase (NCBI) | compare |
| b2512 | yfgL | -1.6 | -4.0 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3631 | rfaG | -1.6 | -6.5 | glucosyltransferase I (NCBI) | compare |
| b3621 | rfaC | -1.6 | -1.5 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1594 | dgsA | -1.6 | -2.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0142 | folK | -1.6 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2392 | mntH | -1.5 | -6.2 | manganese transport protein MntH (NCBI) | compare |
| b0407 | yajC | -1.5 | -2.2 | preprotein translocase subunit YajC (NCBI) | compare |
| b3292 | zntR | -1.5 | -1.0 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b1531 | marA | -1.5 | -3.5 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b0683 | fur | -1.5 | -1.0 | ferric uptake regulator (NCBI) | compare |
| b0738 | tolR | -1.5 | -1.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3414 | gntY | -1.5 | -3.5 | predicted gluconate transport associated protein (NCBI) | compare |
| b2436 | hemF | -1.4 | -3.8 | coproporphyrinogen III oxidase (NCBI) | compare |
| b1231 | tyrT | -1.4 | -1.0 | tRNA-Tyr (NCBI) | compare |
| b0720 | gltA | -1.4 | -4.6 | citrate synthase (NCBI) | compare |
| b3226 | yhcK | -1.4 | -3.3 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b2285 | nuoE | -1.4 | -1.8 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3469 | zntA | -1.4 | -1.6 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b1680 | sufS | -1.4 | -4.9 | selenocysteine lyase (NCBI) | compare |
| b2990 | hybG | -1.3 | -2.4 | hydrogenase 2 accessory protein (NCBI) | compare |
| b0723 | sdhA | -1.3 | -6.9 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b2951 | yggS | -1.3 | -3.6 | predicted enzyme (NCBI) | compare |
| b0015 | dnaJ | -1.3 | -5.7 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3761 | trpT | -1.3 | -1.4 | tRNA-Trp (NCBI) | compare |
| b3545 | proK | -1.3 | -1.8 | tRNA-Pro (NCBI) | compare |
| b1482 | osmC | -1.3 | -1.8 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3260 | dusB | -1.3 | -4.9 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b1682 | sufC | -1.3 | -3.7 | cysteine desulfurase ATPase component (NCBI) | compare |
| b3620 | rfaF | -1.3 | -1.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2280 | nuoJ | -1.3 | -3.4 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2937 | speB | -1.3 | -4.1 | agmatinase (NCBI) | compare |
| b2286 | nuoC | -1.2 | -3.6 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0406 | tgt | -1.2 | -4.2 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b1074 | flgC | -1.2 | -1.7 | flagellar basal-body rod protein C (NCBI) | compare |
| b2518 | ndk | -1.2 | -1.4 | nucleoside diphosphate kinase (NCBI) | compare |
| b3237 | argR | -1.2 | -2.6 | arginine repressor (NCBI) | compare |
| b3742 | mioC | -1.2 | -3.7 | flavodoxin (NCBI) | compare |
| b1863 | ruvC | -1.2 | -1.1 | Holliday junction resolvase (NCBI) | compare |
| b2318 | truA | -1.2 | -1.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1324 | tpx | -1.2 | -2.4 | thiol peroxidase (NCBI) | compare |
| b2288 | nuoA | -1.2 | -2.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b4191 | ulaR | -1.2 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0741 | pal | -1.2 | -1.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0430 | cyoC | -1.2 | -3.0 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2317 | dedA | -1.2 | -3.1 | conserved inner membrane protein (NCBI) | compare |
| b0931 | pncB | -1.2 | -3.2 | nicotinate phosphoribosyltransferase (NCBI) | compare |
| b3229 | sspA | -1.2 | -0.8 | stringent starvation protein A (NCBI) | compare |
| b2741 | rpoS | -1.2 | -3.3 | RNA polymerase sigma factor (NCBI) | compare |
| b4515 | ybgT | -1.2 | -1.4 | hypothetical protein (NCBI) | compare |
| b3094 | exuR | -1.1 | -3.3 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b2282 | nuoH | -1.1 | -1.9 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0888 | trxB | -1.1 | -1.6 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0092 | ddlB | -1.1 | -3.5 | D-alanylalanine synthetase (NCBI) | compare |
| b1765 | ydjA | -1.1 | -0.9 | predicted oxidoreductase (NCBI) | compare |
| b3390 | aroK | -1.1 | -0.8 | shikimate kinase I (NCBI) | compare |
| b2283 | nuoG | -1.1 | -4.0 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1683 | ynhE | -1.1 | -4.3 | orf, hypothetical protein (VIMSS) | compare |
| b1729 | ydjN | -1.1 | -2.9 | predicted transporter (NCBI) | compare |
| b2284 | nuoF | -1.1 | -2.7 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0053 | surA | -1.1 | -1.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2897 | ygfY | -1.1 | -2.1 | hypothetical protein (NCBI) | compare |
| b1185 | dsbB | -1.1 | -2.2 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b3977 | tyrU | -1.1 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b3071 | yqjI | -1.1 | -2.5 | predicted transcriptional regulator (NCBI) | compare |
| b3630 | rfaP | -1.1 | -3.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3806 | cyaA | -1.1 | -2.1 | adenylate cyclase (NCBI) | compare |
| b0617 | citD | -1.1 | -1.7 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b2962 | yggX | -1.0 | -2.1 | hypothetical protein (NCBI) | compare |
| b4370 | leuQ | -1.0 | -1.5 | tRNA-Leu (NCBI) | compare |
| b2277 | nuoM | -1.0 | -2.8 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1523 | yneG | -1.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b3726 | pstA | -1.0 | -2.0 | phosphate transporter subunit (NCBI) | compare |
| b2614 | grpE | -1.0 | -1.4 | heat shock protein (NCBI) | compare |
| b0721 | sdhC | -1.0 | -2.9 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0688 | pgm | -1.0 | -1.2 | phosphoglucomutase (NCBI) | compare |
| b2113 | mrp | -1.0 | -3.3 | putative ATPase (VIMSS) | compare |
| b4676 | yoaK | -1.0 | -0.6 | expressed protein (RefSeq) | compare |
| b3500 | gor | -1.0 | -0.7 | glutathione reductase (NCBI) | compare |
| b0798 | ybiA | -1.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b2156 | lysP | -1.0 | -5.4 | lysine transporter (NCBI) | compare |
| b1823 | cspC | -1.0 | -1.4 | stress protein, member of the CspA-family (NCBI) | compare |
| b1681 | sufD | -1.0 | -3.6 | component of SufBCD complex (NCBI) | compare |
| b4260 | pepA | -1.0 | -5.5 | leucyl aminopeptidase (NCBI) | compare |
| b2276 | nuoN | -1.0 | -2.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1333 | uspE | -1.0 | -2.2 | stress-induced protein (NCBI) | compare |
| b0428 | cyoE | -1.0 | -4.0 | protoheme IX farnesyltransferase (NCBI) | compare |
| b0920 | ycbC | -1.0 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b0122 | yacC | -1.0 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2906 | visC | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b0729 | sucD | -1.0 | -2.1 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1860 | ruvB | -1.0 | -0.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b0676 | nagC | -1.0 | -4.1 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b4598 | yncL | -0.9 | -1.7 | hypothetical protein (RefSeq) | compare |
| b1236 | galU | -0.9 | -1.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3410 | yhgG | -0.9 | -3.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1103 | ycfF | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4589 | ylcI | -0.9 | -1.4 | hypothetical protein (RefSeq) | compare |
| b1658 | purR | -0.9 | -3.1 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1907 | tyrP | -0.9 | -2.8 | tyrosine transporter (NCBI) | compare |
| b2683 | ygaH | -0.9 | -2.6 | predicted inner membrane protein (NCBI) | compare |
| b4649 | ysaD | -0.9 | -2.1 | no description | compare |
| b3950 | frwB | -0.9 | -1.9 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b1095 | fabF | -0.9 | -4.0 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0726 | sucA | -0.9 | -2.1 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1399 | paaX | -0.9 | -2.6 | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI) | compare |
| b0113 | pdhR | -0.9 | -2.4 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b0145 | dksA | -0.9 | -1.0 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0728 | sucC | -0.9 | -3.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b3181 | greA | -0.9 | -2.5 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0737 | tolQ | -0.9 | -0.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2278 | nuoL | -0.9 | -4.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3465 | yhhF | -0.9 | -3.1 | predicted methyltransferase (NCBI) | compare |
| b1679 | sufE | -0.9 | -2.0 | cysteine desufuration protein SufE (NCBI) | compare |
| b3739 | atpI | -0.9 | -3.4 | membrane-bound ATP synthase, dispensable protein, affects expression of atpB (VIMSS) | compare |
| b1583 | ynfB | -0.9 | -1.5 | hypothetical protein (NCBI) | compare |
| b1518 | lsrG | -0.9 | -1.4 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b3601 | mtlR | -0.9 | -3.3 | DNA-binding repressor (NCBI) | compare |
| b1648 | b1648 | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3789 | rffH | -0.9 | -5.4 | glucose-1-phosphate thymidylyltransferase (NCBI) | compare |
| b0149 | mrcB | -0.9 | -5.8 | penicillin-binding protein 1b (NCBI) | compare |
| b1175 | minD | -0.9 | -2.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3466 | yhhL | -0.9 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b0028 | fkpB | -0.9 | -2.4 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b3529 | yhjK | -0.9 | -6.5 | predicted diguanylate cyclase (RefSeq) | compare |
| b0740 | tolB | -0.8 | -1.4 | translocation protein TolB precursor (NCBI) | compare |
| b1253 | yciA | -0.8 | -1.8 | predicted hydrolase (NCBI) | compare |
| b1192 | ldcA | -0.8 | -2.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b1684 | sufA | -0.8 | -1.8 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b3259 | prmA | -0.8 | -2.5 | ribosomal protein L11 methyltransferase (NCBI) | compare |
| b3471 | yhhQ | -0.8 | -3.1 | conserved inner membrane protein (NCBI) | compare |
| b1198 | dhaM | -0.8 | -2.6 | fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component (RefSeq) | compare |
| b2061 | wzb | -0.8 | -1.4 | protein-tyrosine phosphatase (NCBI) | compare |
| b2829 | ptsP | -0.8 | -5.0 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b1514 | lsrC | -0.8 | -1.2 | AI2 transporter (NCBI) | compare |
| b4045 | yjbJ | -0.8 | -1.0 | predicted stress response protein (NCBI) | compare |
| b4596 | yciZ | -0.8 | -1.2 | hypothetical protein (RefSeq) | compare |
| b4557 | yidD | -0.8 | -1.8 | hypothetical protein (NCBI) | compare |
| b1286 | rnb | -0.8 | -1.1 | exoribonuclease II (NCBI) | compare |
| b3844 | fre | -0.8 | -2.7 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3242 | yhcR | -0.8 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b3409 | feoB | -0.8 | -5.2 | ferrous iron transport protein B (NCBI) | compare |
| b1176 | minC | -0.8 | -1.6 | septum formation inhibitor (NCBI) | compare |
| b0927 | ycbL | -0.8 | -1.8 | predicted metal-binding enzyme (NCBI) | compare |
| b3632 | rfaQ | -0.8 | -6.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |