Experiment set8IT052 for Escherichia coli BW25113

Compare to:

LB Aerobic with Nitrofurantoin 0.00003125 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b4058 uvrA -5.3 -12.7 excinuclease ABC subunit A (NCBI) conserved
b0472 recR -4.9 -6.7 recombination protein RecR (NCBI) conserved
b3908 sodA -4.8 -5.6 superoxide dismutase, manganese (VIMSS) compare
b2565 recO -4.5 -6.0 DNA repair protein RecO (NCBI) conserved
b3700 recF -4.0 -10.4 recombination protein F (NCBI) conserved
b3813 uvrD -3.5 -14.1 DNA-dependent ATPase I and helicase II (NCBI) compare
b2892 recJ -2.9 -10.3 ssDNA exonuclease, 5' --> 3'-specific (NCBI) compare
b3822 recQ -1.9 -11.0 ATP-dependent DNA helicase (NCBI) compare
b2616 recN -1.9 -8.6 recombination and repair protein (NCBI) conserved
b0799 dinG -1.7 -7.3 ATP-dependent DNA helicase (NCBI) compare
b3673 emrD -1.7 -8.4 2-module integral membrane pump; multidrug resistance (VIMSS) compare
b3617 kbl -1.5 -6.0 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) compare
b4240 treB -1.3 -7.0 fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) compare
b3893 fdoH +1.0 6.8 formate dehydrogenase-O, Fe-S subunit (NCBI) compare
b3528 dctA +1.0 6.8 C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) compare
b3712 yieE +1.0 5.1 predicted phosphopantetheinyl transferase (RefSeq) compare
b3894 fdoG +1.1 9.1 formate dehydrogenase-O, large subunit (NCBI) compare
b3591 selA +1.2 8.8 selenocysteine synthase (NCBI) compare
b3892 fdoI +1.2 5.5 formate dehydrogenase-O, cytochrome b556 subunit (NCBI) compare
b3895 fdhD +1.3 7.4 formate dehydrogenase accessory protein (NCBI) compare
b4396 rob +1.3 7.3 DNA-binding transcriptional activator (NCBI) compare
b3590 selB +1.3 9.9 selenocysteinyl-tRNA-specific translation factor (NCBI) compare
b4089 rpiR +1.3 8.8 transcriptional repressor of rpiB expression (VIMSS) compare
b0851 nfsA +1.7 6.6 nitroreductase A, NADPH-dependent, FMN-dependent (NCBI) compare
b3812 yigB +2.1 9.7 predicted hydrolase (NCBI) compare
b0931 pncB +2.1 10.1 nicotinate phosphoribosyltransferase (NCBI) compare
b0125 hpt +2.3 9.2 hypoxanthine phosphoribosyltransferase (VIMSS) compare
b2708 gutQ +2.4 9.1 orf, hypothetical protein (VIMSS) compare
b0008 talB +2.6 15.5 transaldolase B (NCBI) compare
b0578 nfnB +5.9 26.2 dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive (NCBI) compare


Specific phenotypes for stress Nitrofurantoin across organisms