| | gene | name | fitness | t score | description | |
|---|
| b0920 | ycbC | -5.5 | -3.8 | conserved inner membrane protein (NCBI) | compare |
| b2175 | spr | -4.4 | -3.0 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0149 | mrcB | -3.7 | -12.8 | penicillin-binding protein 1b (NCBI) | compare |
| b0463 | acrA | -3.1 | -11.9 | multidrug efflux system (NCBI) | compare |
| b3205 | yhbJ | -2.9 | -3.8 | hypothetical protein (NCBI) | compare |
| b1865 | nudB | -2.8 | -1.9 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0462 | acrB | -2.8 | -16.3 | multidrug efflux system protein (NCBI) | compare |
| b1105 | ycfM | -2.5 | -5.6 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1482 | osmC | -2.4 | -2.7 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1493 | gadB | -2.3 | -1.3 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1575 | dicB | -2.3 | -2.1 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3341 | rpsG | -2.2 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b2501 | ppk | -2.2 | -9.0 | polyphosphate kinase (NCBI) | compare |
| b1830 | prc | -2.1 | -3.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1103 | ycfF | -2.1 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1863 | ruvC | -2.1 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b0142 | folK | -2.1 | -1.1 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3792 | wzxE | -2.1 | -4.9 | O-antigen translocase (NCBI) | compare |
| b0726 | sucA | -2.0 | -3.8 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1861 | ruvA | -2.0 | -1.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3035 | tolC | -1.9 | -8.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3199 | yrbK | -1.9 | -3.2 | hypothetical protein (NCBI) | compare |
| b3842 | rfaH | -1.9 | -5.2 | transcriptional activator RfaH (NCBI) | compare |
| b0683 | fur | -1.8 | -1.6 | ferric uptake regulator (NCBI) | compare |
| b3630 | rfaP | -1.8 | -7.1 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0018 | mokC | -1.8 | -2.0 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1238 | tdk | -1.8 | -3.4 | thymidine kinase (NCBI) | compare |
| b4201 | priB | -1.7 | -2.7 | primosomal replication protein N (NCBI) | compare |
| b0053 | surA | -1.7 | -3.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1677 | lpp | -1.7 | -2.4 | murein lipoprotein (NCBI) | compare |
| b1324 | tpx | -1.7 | -3.6 | thiol peroxidase (NCBI) | compare |
| b3791 | rffA | -1.7 | -7.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0957 | ompA | -1.7 | -3.4 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b1506 | yneL | -1.7 | -1.5 | predicted transcriptional regulator (NCBI) | compare |
| b3387 | dam | -1.6 | -9.1 | DNA adenine methylase (NCBI) | compare |
| b2038 | rfbC | -1.6 | -6.1 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b0437 | clpP | -1.5 | -4.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2209 | eco | -1.5 | -2.7 | ecotin precursor (NCBI) | compare |
| b1192 | ldcA | -1.5 | -4.4 | L,D-carboxypeptidase A (NCBI) | compare |
| b0738 | tolR | -1.5 | -2.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1855 | lpxM | -1.5 | -4.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1531 | marA | -1.5 | -3.9 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b3652 | recG | -1.5 | -7.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b0740 | tolB | -1.4 | -2.8 | translocation protein TolB precursor (NCBI) | compare |
| b0724 | sdhB | -1.4 | -5.3 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3962 | udhA | -1.4 | -5.3 | putative oxidoreductase (VIMSS) | compare |
| b3641 | ttk | -1.4 | -7.4 | putative transcriptional regulator (VIMSS) | compare |
| b4481 | rffT | -1.4 | -5.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3784 | rfe | -1.4 | -9.8 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3026 | qseC | -1.4 | -2.2 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4676 | yoaK | -1.4 | -0.8 | expressed protein (RefSeq) | compare |
| b3163 | nlpI | -1.3 | -3.7 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | -1.3 | -3.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1084 | rne | -1.3 | -4.1 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2285 | nuoE | -1.3 | -2.1 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1583 | ynfB | -1.3 | -2.1 | hypothetical protein (NCBI) | compare |
| b2037 | rfbX | -1.3 | -5.3 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b2576 | srmB | -1.3 | -2.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b4202 | rpsR | -1.3 | -1.1 | 30S ribosomal protein S18 (NCBI) | compare |
| b1523 | yneG | -1.3 | -2.3 | hypothetical protein (NCBI) | compare |
| b2512 | yfgL | -1.3 | -4.4 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3229 | sspA | -1.3 | -1.8 | stringent starvation protein A (NCBI) | compare |
| b3631 | rfaG | -1.3 | -8.4 | glucosyltransferase I (NCBI) | compare |
| b2743 | pcm | -1.2 | -3.5 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b0436 | tig | -1.2 | -5.9 | trigger factor (NCBI) | compare |
| b0088 | murD | -1.2 | -2.0 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3627 | rfaI | -1.2 | -5.7 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1187 | fadR | -1.2 | -2.9 | fatty acid metabolism regulator (NCBI) | compare |
| b3790 | rffC | -1.2 | -4.0 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0438 | clpX | -1.2 | -4.6 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b4520 | ymgF | -1.2 | -1.0 | hypothetical protein (NCBI) | compare |
| b3052 | rfaE | -1.1 | -3.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4701 | sokX | -1.1 | -1.0 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2376 | ypdI | -1.1 | -2.3 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b4062 | soxS | -1.1 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3237 | argR | -1.1 | -3.2 | arginine repressor (NCBI) | compare |
| b3609 | secB | -1.1 | -3.1 | export protein SecB (NCBI) | compare |
| b3742 | mioC | -1.1 | -4.2 | flavodoxin (NCBI) | compare |
| b3621 | rfaC | -1.1 | -3.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0178 | hlpA | -1.0 | -3.0 | periplasmic chaperone (NCBI) | compare |
| b0632 | dacA | -1.0 | -5.2 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2506 | yfgI | -1.0 | -1.6 | hypothetical protein (NCBI) | compare |
| b2617 | smpA | -1.0 | -2.3 | small membrane protein A (VIMSS) | compare |
| b4431 | rprA | -1.0 | -1.6 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3911 | cpxA | -1.0 | -6.0 | two-component sensor protein (NCBI) | compare |
| b2330 | yfcB | -0.9 | -0.8 | putative adenine-specific methylase (VIMSS) | compare |
| b0840 | deoR | -0.9 | -3.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0688 | pgm | -0.9 | -1.9 | phosphoglucomutase (NCBI) | compare |
| b0605 | ahpC | -0.9 | -2.7 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1164 | ycgZ | -0.9 | -0.9 | hypothetical protein (NCBI) | compare |
| b0641 | rlpB | -0.9 | -1.6 | minor lipoprotein (NCBI) | compare |
| b2299 | yfcD | -0.9 | -3.1 | predicted NUDIX hydrolase (NCBI) | compare |
| b3628 | rfaB | -0.9 | -4.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3545 | proK | -0.9 | -1.8 | tRNA-Pro (NCBI) | compare |
| b2494 | yfgC | -0.9 | -4.6 | predicted peptidase (NCBI) | compare |
| b3649 | rpoZ | -0.9 | -1.8 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4242 | mgtA | -0.9 | -5.0 | magnesium transporter (NCBI) | compare |
| b1548 | nohA | -0.9 | -1.1 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b2393 | nupC | -0.9 | -4.1 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b0723 | sdhA | -0.9 | -5.6 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b2553 | glnB | -0.9 | -2.4 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b1882 | cheY | -0.9 | -0.6 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3813 | uvrD | -0.9 | -6.4 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b0990 | cspG | -0.9 | -0.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1604 | ydgH | -0.8 | -2.9 | hypothetical protein (NCBI) | compare |
| b1333 | uspE | -0.8 | -1.9 | stress-induced protein (NCBI) | compare |
| b2189 | proL | -0.8 | -1.4 | tRNA-Pro (NCBI) | compare |
| b0741 | pal | -0.8 | -2.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0318 | yahD | -0.8 | -3.5 | predicted transcriptional regulator with ankyrin domain (NCBI) | compare |
| b3787 | rffD | -0.8 | -5.7 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b2744 | surE | -0.8 | -3.9 | acid phosphatase (NCBI) | compare |
| b1346 | ydaQ | -0.8 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2215 | ompC | -0.8 | -4.4 | outer membrane porin protein C (NCBI) | compare |
| b4413 | sokC | -0.8 | -1.4 | regulatory antisense RNA (NCBI) | compare |
| b2572 | rseA | -0.8 | -3.3 | anti-sigma factor (NCBI) | compare |
| b1591 | b1591 | -0.8 | -1.2 | putative oxidoreductase component (VIMSS) | compare |
| b2058 | wcaB | -0.8 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b0125 | hpt | -0.8 | -3.2 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b1607 | ydgC | -0.8 | -1.3 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2968 | yghD | -0.8 | -3.2 | predicted secretion pathway M-type protein, membrane anchored (NCBI) | compare |
| b1949 | fliQ | -0.8 | -1.6 | flagellar biosynthesis protein Q (NCBI) | compare |
| b3469 | zntA | -0.8 | -3.6 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b3619 | rfaD | -0.8 | -1.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0721 | sdhC | -0.8 | -2.3 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2897 | ygfY | -0.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b0028 | fkpB | -0.8 | -2.3 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b0729 | sucD | -0.8 | -2.1 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3404 | envZ | -0.8 | -4.3 | osmolarity sensor protein (NCBI) | compare |
| b2518 | ndk | -0.7 | -1.3 | nucleoside diphosphate kinase (NCBI) | compare |
| b4699 | fnrS | -0.7 | -0.6 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3806 | cyaA | -0.7 | -2.8 | adenylate cyclase (NCBI) | compare |
| b0092 | ddlB | -0.7 | -3.0 | D-alanylalanine synthetase (NCBI) | compare |
| b2808 | gcvA | -0.7 | -2.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0739 | tolA | -0.7 | -1.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2990 | hybG | -0.7 | -1.7 | hydrogenase 2 accessory protein (NCBI) | compare |
| b4702 | mgtL | -0.7 | -0.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2003 | yeeT | -0.7 | -2.0 | CP4-44 prophage; predicted protein (NCBI) | compare |
| b1259 | yciG | -0.7 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1989 | asnV | -0.7 | -1.7 | tRNA-Asn (NCBI) | compare |
| b2009 | sbmC | -0.7 | -2.0 | DNA gyrase inhibitor (NCBI) | compare |
| b1842 | holE | -0.7 | -0.9 | DNA polymerase III, theta subunit (NCBI) | compare |
| b3794 | rffM | -0.7 | -3.9 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b4596 | yciZ | -0.7 | -1.1 | hypothetical protein (RefSeq) | compare |
| b4406 | yaeP | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b2114 | metG | -0.7 | -1.2 | methionyl-tRNA synthetase (NCBI) | compare |
| b1104 | ycfL | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b1434 | ydcN | -0.7 | -1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0430 | cyoC | -0.7 | -2.3 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b4025 | pgi | -0.7 | -3.6 | glucose-6-phosphate isomerase (NCBI) | compare |
| b4598 | yncL | -0.7 | -1.6 | hypothetical protein (RefSeq) | compare |
| b1733 | chbG | -0.7 | -2.6 | hypothetical protein (NCBI) | compare |
| b1567 | intK | -0.7 | -1.3 | Qin prophage; predicted protein (RefSeq) | compare |
| b3169 | nusA | -0.7 | -1.7 | transcription elongation factor NusA (NCBI) | compare |
| b3844 | fre | -0.7 | -2.9 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1150 | ymfR | -0.7 | -0.7 | e14 prophage; predicted protein (NCBI) | compare |
| b2516 | yfgA | -0.7 | -3.1 | hypothetical protein (NCBI) | compare |
| b1235 | rssB | -0.7 | -3.2 | response regulator of RpoS (NCBI) | compare |
| b4441 | glmY | -0.7 | -1.3 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b0737 | tolQ | -0.7 | -1.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1860 | ruvB | -0.7 | -0.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b1689 | b1689 | -0.7 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2859 | ygeO | -0.7 | -0.7 | hypothetical protein (RefSeq) | compare |
| b2282 | nuoH | -0.7 | -1.6 | NADH dehydrogenase subunit H (NCBI) | compare |
| b4313 | fimE | -0.7 | -3.4 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b0782 | moaB | -0.7 | -1.2 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b1648 | b1648 | -0.7 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3977 | tyrU | -0.7 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b1505 | ydeT | -0.7 | -0.6 | hypothetical protein (RefSeq) | compare |
| b1236 | galU | -0.7 | -1.6 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1762 | b1762 | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0222 | lpcA | -0.6 | -1.4 | phosphoheptose isomerase (NCBI) | compare |
| b1605 | ydgI | -0.6 | -2.0 | predicted arginine/ornithine antiporter transporter (NCBI) | compare |
| b2288 | nuoA | -0.6 | -1.6 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1025 | ycdT | -0.6 | -0.6 | predicted diguanylate cyclase (NCBI) | compare |
| b0759 | galE | -0.6 | -2.9 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b1536 | ydeI | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b2413 | cysZ | -0.6 | -3.1 | putative sulfate transport protein CysZ (NCBI) | compare |
| b0877 | ybjX | -0.6 | -3.3 | hypothetical protein (NCBI) | compare |
| b1658 | purR | -0.6 | -2.4 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b4246 | pyrL | -0.6 | -1.6 | pyrBI operon leader peptide (NCBI) | compare |
| b2894 | xerD | -0.6 | -0.4 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3786 | rffE | -0.6 | -4.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0862 | artQ | -0.6 | -1.3 | arginine transporter subunit (NCBI) | compare |
| b1233 | ychJ | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b3195 | yrbF | -0.6 | -4.0 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3950 | frwB | -0.6 | -1.6 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b2369 | evgA | -0.6 | -1.1 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b2784 | relA | -0.6 | -3.9 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0082 | mraW | -0.6 | -1.5 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4522 | yciX_1 | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| b2174 | b2174 | -0.6 | -3.3 | orf, hypothetical protein (VIMSS) | compare |
| b4552 | yrhC | -0.6 | -0.4 | no description | compare |
| b0049 | apaH | -0.6 | -1.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b0340 | cynS | -0.6 | -1.7 | cyanate hydratase (NCBI) | compare |
| b4519 | icdC | -0.6 | -2.0 | no description | compare |
| b2284 | nuoF | -0.6 | -1.9 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1074 | flgC | -0.6 | -1.1 | flagellar basal-body rod protein C (NCBI) | compare |
| b1161 | ycgX | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b2317 | dedA | -0.6 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b1466 | narW | -0.6 | -2.2 | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) (NCBI) | compare |