Experiment set8IT034 for Escherichia coli BW25113

LB Aerobic with Doxycycline hyclate 0.0000015625 mM

Group: stress
Media: LB + Doxycycline hyclate (1.56E-03 mM)
Culturing: Keio_ML9a, 96 deep-well microplate; Multitron, Aerobic, at 37 (C), shaken=750 rpm
By: Hans_Hualan on 7/20/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 6 genes in this experiment

For stress Doxycycline hyclate in Escherichia coli BW25113

For stress Doxycycline hyclate across organisms

SEED Subsystems

Subsystem	#Specific
Deoxyribose and Deoxynucleoside Catabolism	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pentose phosphate pathway
• Purine metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
di-trans,poly-cis-undecaprenyl phosphate biosynthesis	2	2	1
2-deoxy-α-D-ribose 1-phosphate degradation	3	3	1
polyisoprenoid biosynthesis (E. coli)	5	5	1
purine ribonucleosides degradation	6	6	1
superpathway of pyrimidine deoxyribonucleosides degradation	6	6	1
superpathway of purine deoxyribonucleosides degradation	7	7	1