| | gene | name | fitness | t score | description | |
|---|
| b0912 | ihfB | -4.1 | -2.8 | integration host factor subunit beta (NCBI) | compare |
| b0462 | acrB | -3.7 | -13.1 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -3.5 | -9.9 | multidrug efflux system (NCBI) | compare |
| b4201 | priB | -3.5 | -2.4 | primosomal replication protein N (NCBI) | compare |
| b1677 | lpp | -3.3 | -2.3 | murein lipoprotein (NCBI) | compare |
| b0605 | ahpC | -3.2 | -3.1 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3035 | tolC | -3.1 | -6.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1531 | marA | -3.0 | -4.4 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b2188 | yejM | -2.9 | -7.6 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3842 | rfaH | -2.8 | -3.8 | transcriptional activator RfaH (NCBI) | compare |
| b2317 | dedA | -2.8 | -5.1 | conserved inner membrane protein (NCBI) | compare |
| b3194 | yrbE | -2.7 | -10.6 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0178 | hlpA | -2.7 | -4.6 | periplasmic chaperone (NCBI) | compare |
| b3341 | rpsG | -2.6 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b2174 | b2174 | -2.6 | -7.6 | orf, hypothetical protein (VIMSS) | compare |
| b3195 | yrbF | -2.5 | -10.5 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3192 | yrbC | -2.4 | -9.1 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2017 | yefM | -2.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3465 | yhhF | -2.4 | -6.4 | predicted methyltransferase (NCBI) | compare |
| b3191 | yrbB | -2.4 | -9.3 | orf, hypothetical protein (VIMSS) | compare |
| b3199 | yrbK | -2.4 | -2.8 | hypothetical protein (NCBI) | compare |
| b3632 | rfaQ | -2.4 | -12.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0957 | ompA | -2.4 | -3.1 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3193 | yrbD | -2.3 | -8.8 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2784 | relA | -2.3 | -9.0 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b4472 | yhdP | -2.3 | -15.7 | conserved membrane protein, predicted transporter (NCBI) | compare |
| b1855 | lpxM | -2.2 | -4.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3163 | nlpI | -2.2 | -3.2 | hypothetical protein (NCBI) | compare |
| b4041 | plsB | -2.1 | -2.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b3784 | rfe | -2.1 | -12.1 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3052 | rfaE | -2.1 | -3.4 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3621 | rfaC | -2.1 | -2.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3631 | rfaG | -2.0 | -8.5 | glucosyltransferase I (NCBI) | compare |
| b4203 | rplI | -2.0 | -3.7 | 50S ribosomal protein L9 (NCBI) | compare |
| b4655 | ythA | -2.0 | -1.3 | expressed protein (RefSeq) | compare |
| b2346 | vacJ | -1.9 | -6.4 | predicted lipoprotein (NCBI) | compare |
| b3021 | ygiT | -1.9 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3620 | rfaF | -1.8 | -2.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1830 | prc | -1.8 | -2.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1249 | cls | -1.8 | -5.2 | cardiolipin synthetase (NCBI) | compare |
| b4000 | hupA | -1.8 | -3.6 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1818 | manY | -1.8 | -2.3 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b3790 | rffC | -1.8 | -4.4 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2168 | fruK | -1.7 | -1.6 | 1-phosphofructokinase (NCBI) | compare |
| b3761 | trpT | -1.7 | -1.9 | tRNA-Trp (NCBI) | compare |
| b3794 | rffM | -1.7 | -6.6 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b2512 | yfgL | -1.6 | -4.5 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3630 | rfaP | -1.6 | -4.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3785 | wzzE | -1.6 | -9.4 | putative transport protein (VIMSS) | compare |
| b3786 | rffE | -1.6 | -10.1 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b4481 | rffT | -1.6 | -5.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1323 | tyrR | -1.6 | -4.4 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b2236 | yfaE | -1.6 | -2.3 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b3787 | rffD | -1.6 | -8.9 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4550 | yhdL | -1.6 | -4.4 | hypothetical protein (NCBI) | compare |
| b3627 | rfaI | -1.6 | -5.2 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b4570 | lomR | -1.6 | -2.0 | no description | compare |
| b2064 | asmA | -1.6 | -4.3 | predicted assembly protein (NCBI) | compare |
| b0843 | ybjH | -1.6 | -2.6 | hypothetical protein (NCBI) | compare |
| b3619 | rfaD | -1.6 | -1.5 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1685 | ydiH | -1.5 | -1.3 | predicted protein (RefSeq) | compare |
| b2829 | ptsP | -1.5 | -8.2 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b4414 | tff | -1.5 | -2.1 | unknown RNA (NCBI) | compare |
| b1413 | hrpA | -1.5 | -6.7 | ATP-dependent helicase (RefSeq) | conserved |
| b1518 | lsrG | -1.5 | -1.9 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b3609 | secB | -1.5 | -3.5 | export protein SecB (NCBI) | compare |
| b0014 | dnaK | -1.5 | -1.3 | molecular chaperone DnaK (NCBI) | compare |
| b1278 | pgpB | -1.5 | -2.1 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2579 | yfiD | -1.4 | -1.8 | pyruvate formate lyase subunit (NCBI) | compare |
| b4701 | sokX | -1.4 | -0.9 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1863 | ruvC | -1.4 | -1.0 | Holliday junction resolvase (NCBI) | compare |
| b1482 | osmC | -1.4 | -2.0 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0053 | surA | -1.4 | -1.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3791 | rffA | -1.4 | -5.8 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2617 | smpA | -1.4 | -2.3 | small membrane protein A (VIMSS) | compare |
| b2553 | glnB | -1.4 | -3.2 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3931 | hslU | -1.3 | -7.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3387 | dam | -1.3 | -7.3 | DNA adenine methylase (NCBI) | compare |
| b1861 | ruvA | -1.3 | -0.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3764 | yifE | -1.3 | -3.7 | hypothetical protein (NCBI) | compare |
| b2377 | yfdY | -1.3 | -2.1 | predicted inner membrane protein (NCBI) | compare |
| b3961 | oxyR | -1.3 | -7.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0247 | ykfG | -1.3 | -1.3 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b0001 | thrL | -1.3 | -2.0 | thr operon leader peptide (NCBI) | compare |
| b1540 | ydfH | -1.3 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4679 | yohP | -1.3 | -2.0 | expressed protein (RefSeq) | compare |
| b0877 | ybjX | -1.3 | -4.4 | hypothetical protein (NCBI) | compare |
| b0925 | ycbB | -1.3 | -5.4 | predicted carboxypeptidase (NCBI) | compare |
| b0015 | dnaJ | -1.3 | -5.7 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b0746 | valZ | -1.2 | -1.4 | tRNA-Val (NCBI) | compare |
| b4596 | yciZ | -1.2 | -1.5 | hypothetical protein (RefSeq) | compare |
| b3229 | sspA | -1.2 | -1.2 | stringent starvation protein A (NCBI) | compare |
| b0632 | dacA | -1.2 | -5.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0738 | tolR | -1.2 | -1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1954 | dsrA | -1.2 | -2.0 | regulatory antisense RNA (NCBI) | compare |
| b1831 | proQ | -1.2 | -2.7 | putative solute/DNA competence effector (NCBI) | compare |
| b2258 | b2258 | -1.2 | -1.2 | putative transport/receptor protein (VIMSS) | compare |
| b0122 | yacC | -1.2 | -3.5 | orf, hypothetical protein (VIMSS) | compare |
| b1104 | ycfL | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b0741 | pal | -1.2 | -1.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3082 | ygjM | -1.2 | -0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1103 | ycfF | -1.2 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0222 | lpcA | -1.2 | -1.8 | phosphoheptose isomerase (NCBI) | compare |
| b4685 | yrbN | -1.2 | -1.7 | expressed protein (RefSeq) | compare |
| b2080 | b2080 | -1.1 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0677 | nagA | -1.1 | -3.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1348 | lar | -1.1 | -1.2 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3396 | mrcA | -1.1 | -9.2 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b3644 | yicC | -1.1 | -4.2 | hypothetical protein (NCBI) | compare |
| b2807 | ygdD | -1.1 | -3.2 | conserved inner membrane protein (NCBI) | compare |
| b2809 | b2809 | -1.1 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1567 | intK | -1.1 | -1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b1105 | ycfM | -1.1 | -2.9 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4062 | soxS | -1.1 | -3.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0836 | yliH | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b2144 | sanA | -1.1 | -5.1 | hypothetical protein (NCBI) | compare |
| b4529 | ydbJ | -1.1 | -0.9 | hypothetical protein (NCBI) | compare |
| b3147 | yraM | -1.1 | -7.0 | hypothetical protein (NCBI) | compare |
| b1176 | minC | -1.1 | -2.0 | septum formation inhibitor (NCBI) | compare |
| b3026 | qseC | -1.1 | -0.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0825 | mipB | -1.0 | -3.1 | putative transaldolase (VIMSS) | compare |
| b2209 | eco | -1.0 | -1.7 | ecotin precursor (NCBI) | compare |
| b2038 | rfbC | -1.0 | -3.8 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b0989 | cspH | -1.0 | -1.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b4480 | hdfR | -1.0 | -3.7 | transcriptional regulator HdfR (NCBI) | compare |
| b2494 | yfgC | -1.0 | -4.5 | predicted peptidase (NCBI) | compare |
| b3932 | hslV | -1.0 | -6.2 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b4151 | frdD | -1.0 | -2.4 | fumarate reductase subunit D (NCBI) | compare |
| b4042 | dgkA | -1.0 | -0.7 | diacylglycerol kinase (NCBI) | compare |
| b2814 | metZ | -1.0 | -1.2 | tRNA-Met (NCBI) | compare |
| b2893 | dsbC | -1.0 | -4.0 | protein disulfide isomerase II (NCBI) | compare |
| b1126 | potA | -1.0 | -3.9 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b4503 | yafF | -1.0 | -0.6 | no description | compare |
| b2646 | ypjF | -1.0 | -1.6 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b0108 | ppdD | -1.0 | -3.1 | predicted major pilin subunit (NCBI) | compare |
| b1344 | ydaO | -1.0 | -1.9 | predicted C32 tRNA thiolase (NCBI) | compare |
| b4202 | rpsR | -1.0 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b2910 | zapA | -1.0 | -3.1 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1124 | potC | -1.0 | -3.1 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0740 | tolB | -1.0 | -1.7 | translocation protein TolB precursor (NCBI) | compare |
| b1289 | ycjD | -1.0 | -2.3 | hypothetical protein (NCBI) | compare |
| b2558 | mltF | -1.0 | -6.0 | predicted periplasmic binding protein/transglycosylase (RefSeq) | compare |
| b1860 | ruvB | -1.0 | -0.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b0149 | mrcB | -1.0 | -6.4 | penicillin-binding protein 1b (NCBI) | compare |
| b2282 | nuoH | -1.0 | -2.0 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1164 | ycgZ | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -1.0 | -2.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3844 | fre | -1.0 | -3.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1871 | yecP | -1.0 | -2.1 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2444 | yffM | -1.0 | -1.3 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b2344 | fadL | -1.0 | -4.8 | long-chain fatty acid outer membrane transporter (RefSeq) | compare |
| b4608 | ryfC | -1.0 | -2.0 | Novel sRNA, function unknown (RefSeq) | compare |
| b0736 | ybgC | -1.0 | -2.4 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b3652 | recG | -1.0 | -4.7 | ATP-dependent DNA helicase (NCBI) | compare |
| b1125 | potB | -0.9 | -2.4 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0784 | moaD | -0.9 | -1.9 | molybdopterin synthase, small subunit (NCBI) | compare |
| b1671 | ydhX | -0.9 | -1.8 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b3933 | ftsN | -0.9 | -5.4 | essential cell division protein (NCBI) | compare |
| b3658 | selC | -0.9 | -2.0 | tRNA-Sec (NCBI) | compare |
| b1523 | yneG | -0.9 | -1.7 | hypothetical protein (NCBI) | compare |
| b1562 | hokD | -0.9 | -1.6 | Qin prophage; small toxic polypeptide (NCBI) | compare |
| b2237 | inaA | -0.9 | -2.1 | hypothetical protein (NCBI) | compare |
| b1790 | yeaM | -0.9 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4096 | phnL | -0.9 | -2.5 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b2181 | yejG | -0.9 | -2.5 | hypothetical protein (NCBI) | compare |
| b4396 | rob | -0.9 | -5.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b4676 | yoaK | -0.9 | -0.6 | expressed protein (RefSeq) | compare |
| b4402 | yjjY | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | -0.9 | -1.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1647 | ydhF | -0.9 | -2.7 | predicted oxidoreductase (NCBI) | compare |
| b3085 | ygjP | -0.9 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b4045 | yjbJ | -0.9 | -1.3 | predicted stress response protein (NCBI) | compare |
| b2906 | visC | -0.9 | -3.1 | hypothetical protein (NCBI) | compare |
| b3206 | npr | -0.9 | -1.9 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b0739 | tolA | -0.9 | -1.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1524 | yneH | -0.9 | -0.7 | predicted glutaminase (NCBI) | compare |
| b3807 | cyaY | -0.9 | -4.1 | frataxin-like protein (NCBI) | compare |
| b1353 | sieB | -0.9 | -2.5 | phage superinfection exclusion protein (VIMSS) | compare |
| b3207 | yrbL | -0.8 | -3.2 | hypothetical protein (NCBI) | compare |
| b1236 | galU | -0.8 | -1.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4046 | yjbK | -0.8 | -3.3 | putative regulator (VIMSS) | compare |
| b2572 | rseA | -0.8 | -2.8 | anti-sigma factor (NCBI) | compare |
| b1349 | recT | -0.8 | -3.1 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b0542 | renD | -0.8 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2040 | rfbD | -0.8 | -4.5 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | compare |
| b0819 | ybiS | -0.8 | -4.0 | hypothetical protein (NCBI) | compare |
| b1302 | puuE | -0.8 | -2.1 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b1286 | rnb | -0.8 | -1.1 | exoribonuclease II (NCBI) | compare |
| b2027 | wzzB | -0.8 | -2.8 | regulator of length of O-antigen component of lipopolysaccharide chains (VIMSS) | compare |
| b3545 | proK | -0.8 | -1.5 | tRNA-Pro (NCBI) | compare |
| b2314 | dedD | -0.8 | -2.0 | putative lipoprotein (VIMSS) | compare |
| b1438 | ydcQ | -0.8 | -1.7 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1834 | yebT | -0.8 | -4.1 | orf, hypothetical protein (VIMSS) | compare |
| b0049 | apaH | -0.8 | -1.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b4406 | yaeP | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b0549 | ybcO | -0.8 | -1.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3628 | rfaB | -0.8 | -3.4 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b1153 | ymfQ | -0.8 | -1.3 | e14 prophage; conserved protein (NCBI) | compare |
| b0013 | yaaI | -0.8 | -2.8 | hypothetical protein (NCBI) | compare |
| b4413 | sokC | -0.8 | -1.1 | regulatory antisense RNA (NCBI) | compare |