Experiment set8IT010 for Escherichia coli BW25113

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LB Aerobic with 2-Mercaptopyridine N-oxide sodium salt 0.0000078125 mM

Group: stress
Media: LB + 2-Mercaptopyridine N-oxide sodium salt (7.81E-03 mM)
Culturing: Keio_ML9a, 96 deep-well microplate; Multitron, Aerobic, at 37 (C), shaken=750 rpm
By: Hans_Hualan on 7/20/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 14 genes in this experiment

For stress 2-Mercaptopyridine N-oxide sodium salt in Escherichia coli BW25113

For stress 2-Mercaptopyridine N-oxide sodium salt across organisms

SEED Subsystems

Subsystem #Specific
Oxidative stress 2
CBSS-562.2.peg.5158 SK3 including 1
DNA repair, bacterial 1
Experimental tye 1
Heme and Siroheme Biosynthesis 1
Nitric oxide synthase 1
Peptidyl-prolyl cis-trans isomerase 1
Potassium homeostasis 1
Purine conversions 1
Transport of Manganese 1
Transport of Zinc 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
siroheme biosynthesis 4 4 2
guanine and guanosine salvage II 2 2 1
superoxide radicals degradation 2 2 1
guanine and guanosine salvage I 2 2 1
xanthine and xanthosine salvage 2 2 1
superpathway of guanine and guanosine salvage 3 3 1
adenine salvage 3 3 1
factor 430 biosynthesis 7 3 2
heme b biosynthesis V (aerobic) 4 4 1
reactive oxygen species degradation 4 4 1
adenine and adenosine salvage III 4 4 1
heme b biosynthesis I (aerobic) 4 4 1
superpathway of heme b biosynthesis from uroporphyrinogen-III 6 6 1
cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) 13 2 2
ethene biosynthesis III (microbes) 7 6 1
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) 15 3 2
superpathway of heme b biosynthesis from glycine 8 7 1
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) 9 3 1
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent) 9 3 1
superpathway of heme b biosynthesis from glutamate 10 10 1
NiFe(CO)(CN)2 cofactor biosynthesis 10 9 1
superpathway of purine nucleotide salvage 14 13 1
adenosylcobalamin biosynthesis II (aerobic) 33 17 2
adenosylcobalamin biosynthesis I (anaerobic) 36 16 2