| | gene | name | fitness | t score | description | |
|---|
| b1192 | ldcA | -3.1 | -4.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b0142 | folK | -3.0 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4458 | oxyS | -2.9 | -0.7 | global regulatory RNA (NCBI) | compare |
| b3649 | rpoZ | -2.8 | -2.9 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0683 | fur | -2.8 | -0.9 | ferric uptake regulator (NCBI) | compare |
| b1231 | tyrT | -2.8 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b3839 | tatC | -2.7 | -6.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3977 | tyrU | -2.6 | -0.5 | tRNA-Tyr (NCBI) | compare |
| b3961 | oxyR | -2.6 | -9.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3341 | rpsG | -2.6 | -0.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b1882 | cheY | -2.5 | -0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b4655 | ythA | -2.3 | -1.0 | expressed protein (RefSeq) | compare |
| b2259 | pmrD | -2.3 | -0.7 | polymyxin resistance protein B (VIMSS) | compare |
| b1104 | ycfL | -2.3 | -1.2 | hypothetical protein (NCBI) | compare |
| b2051 | wcaH | -2.2 | -1.1 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b0018 | mokC | -2.1 | -0.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1480 | sra | -2.1 | -0.9 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1273 | yciN | -1.9 | -0.9 | hypothetical protein (NCBI) | compare |
| b0605 | ahpC | -1.9 | -3.4 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1572 | ydfB | -1.9 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0737 | tolQ | -1.9 | -1.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0902 | pflA | -1.9 | -5.1 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1370 | insH-5 | -1.9 | -1.3 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b0990 | cspG | -1.8 | -0.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2904 | gcvH | -1.8 | -1.4 | glycine cleavage system protein H (NCBI) | compare |
| b1563 | relE | -1.8 | -1.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b3052 | rfaE | -1.8 | -3.9 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3778 | rep | -1.7 | -6.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1667 | ydhR | -1.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b0903 | pflB | -1.7 | -7.2 | pyruvate formate lyase I (NCBI) | compare |
| b4529 | ydbJ | -1.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b4551 | yheV | -1.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b4163 | glyV | -1.6 | -0.9 | tRNA-Gly (NCBI) | compare |
| b0888 | trxB | -1.6 | -2.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3387 | dam | -1.6 | -8.0 | DNA adenine methylase (NCBI) | compare |
| b4613 | dinQ | -1.6 | -1.0 | Damage inducible, function unknown (RefSeq) | compare |
| b0767 | ybhE | -1.5 | -2.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b3162 | deaD | -1.5 | -2.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1269 | rluB | -1.5 | -2.2 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b4402 | yjjY | -1.5 | -0.5 | hypothetical protein (NCBI) | compare |
| b1841 | yobA | -1.5 | -1.1 | hypothetical protein (NCBI) | compare |
| b1307 | pspD | -1.5 | -0.9 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b0740 | tolB | -1.5 | -2.3 | translocation protein TolB precursor (NCBI) | compare |
| b0547 | ybcN | -1.5 | -2.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3601 | mtlR | -1.5 | -4.1 | DNA-binding repressor (NCBI) | compare |
| b1279 | yciS | -1.5 | -0.6 | conserved inner membrane protein (NCBI) | compare |
| b2287 | nuoB | -1.5 | -2.7 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2947 | gshB | -1.5 | -2.5 | glutathione synthetase (NCBI) | compare |
| b0782 | moaB | -1.4 | -1.2 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b4571 | wbbL | -1.4 | -1.9 | no description | compare |
| b1709 | btuD | -1.4 | -0.5 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1419 | ydcA | -1.4 | -3.4 | hypothetical protein (NCBI) | compare |
| b3636 | rpmG | -1.4 | -0.7 | 50S ribosomal protein L33 (NCBI) | compare |
| b0014 | dnaK | -1.4 | -0.9 | molecular chaperone DnaK (NCBI) | compare |
| b3842 | rfaH | -1.4 | -3.8 | transcriptional activator RfaH (NCBI) | compare |
| b2808 | gcvA | -1.4 | -2.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4178 | yjeB | -1.4 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1183 | umuD | -1.4 | -1.1 | DNA polymerase V, subunit D (NCBI) | compare |
| b2553 | glnB | -1.4 | -3.5 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0080 | fruR | -1.4 | -4.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2284 | nuoF | -1.4 | -3.1 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1658 | purR | -1.4 | -3.4 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3164 | pnp | -1.4 | -1.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3026 | qseC | -1.4 | -2.3 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2569 | lepA | -1.4 | -2.7 | GTP-binding protein LepA (NCBI) | compare |
| b1839 | yebY | -1.4 | -2.2 | hypothetical protein (NCBI) | compare |
| b3390 | aroK | -1.4 | -1.2 | shikimate kinase I (NCBI) | compare |
| b2082 | ogrK | -1.4 | -1.8 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b4413 | sokC | -1.4 | -0.7 | regulatory antisense RNA (NCBI) | compare |
| b1236 | galU | -1.3 | -2.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0386 | proC | -1.3 | -2.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4320 | fimH | -1.3 | -7.6 | minor component of type 1 fimbriae (NCBI) | compare |
| b2288 | nuoA | -1.3 | -2.0 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2318 | truA | -1.3 | -2.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1358 | ydaT | -1.3 | -0.7 | Rac prophage; predicted protein (NCBI) | compare |
| b1739 | osmE | -1.3 | -1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b3075 | ebgR | -1.3 | -3.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3784 | rfe | -1.3 | -7.0 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0721 | sdhC | -1.3 | -2.4 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0741 | pal | -1.3 | -2.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0101 | yacG | -1.3 | -2.2 | zinc-binding protein (NCBI) | compare |
| b0696 | kdpC | -1.3 | -1.9 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b1487 | ddpA | -1.3 | -3.3 | D-ala-D-a la transporter subunit (NCBI) | compare |
| b2187 | yejL | -1.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b0688 | pgm | -1.3 | -2.2 | phosphoglucomutase (NCBI) | compare |
| b0617 | citD | -1.3 | -0.9 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b0739 | tolA | -1.3 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3500 | gor | -1.2 | -0.6 | glutathione reductase (NCBI) | compare |
| b1293 | sapB | -1.2 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3183 | obgE | -1.2 | -0.4 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3791 | rffA | -1.2 | -3.8 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0222 | lpcA | -1.2 | -1.5 | phosphoheptose isomerase (NCBI) | compare |
| b2990 | hybG | -1.2 | -1.2 | hydrogenase 2 accessory protein (NCBI) | compare |
| b1575 | dicB | -1.2 | -0.6 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3237 | argR | -1.2 | -2.2 | arginine repressor (NCBI) | compare |
| b1103 | ycfF | -1.2 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2272 | yfbM | -1.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b1685 | ydiH | -1.2 | -0.7 | predicted protein (RefSeq) | compare |
| b4203 | rplI | -1.2 | -2.3 | 50S ribosomal protein L9 (NCBI) | compare |
| b2707 | srlR | -1.2 | -3.4 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b3973 | birA | -1.2 | -1.2 | biotin--protein ligase (NCBI) | compare |
| b1999 | yeeP | -1.2 | -2.0 | putative histone (VIMSS) | compare |
| b0015 | dnaJ | -1.2 | -5.1 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3844 | fre | -1.2 | -3.8 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1306 | pspC | -1.1 | -1.1 | DNA-binding transcriptional activator (NCBI) | compare |
| b1418 | cybB | -1.1 | -2.0 | cytochrome b(561) (VIMSS) | compare |
| b0051 | ksgA | -1.1 | -3.0 | dimethyladenosine transferase (NCBI) | compare |
| b1744 | astE | -1.1 | -3.5 | succinylglutamate desuccinylase (NCBI) | compare |
| b0730 | mngR | -1.1 | -0.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1368 | ynaA | -1.1 | -1.3 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b1855 | lpxM | -1.1 | -2.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3250 | mreC | -1.1 | -0.9 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1217 | chaB | -1.1 | -0.6 | cation transport regulator (NCBI) | compare |
| b3226 | yhcK | -1.1 | -3.1 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b1724 | ydiZ | -1.1 | -0.9 | hypothetical protein (NCBI) | compare |
| b1557 | cspB | -1.1 | -0.9 | Qin prophage; cold shock protein (NCBI) | compare |
| b1973 | yodA | -1.1 | -2.4 | conserved metal-binding protein (NCBI) | compare |
| b1523 | yneG | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b0429 | cyoD | -1.1 | -3.0 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b0904 | focA | -1.1 | -3.7 | formate transporter (NCBI) | compare |
| b1292 | sapC | -1.1 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2498 | upp | -1.1 | -1.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0677 | nagA | -1.1 | -3.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3792 | wzxE | -1.1 | -4.4 | O-antigen translocase (NCBI) | compare |
| b1074 | flgC | -1.1 | -1.0 | flagellar basal-body rod protein C (NCBI) | compare |
| b4180 | rlmB | -1.1 | -4.1 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b0471 | ybaB | -1.1 | -1.5 | hypothetical protein (NCBI) | compare |
| b3259 | prmA | -1.1 | -2.7 | ribosomal protein L11 methyltransferase (NCBI) | compare |
| b3726 | pstA | -1.0 | -2.9 | phosphate transporter subunit (NCBI) | compare |
| b1263 | trpD | -1.0 | -1.1 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b3620 | rfaF | -1.0 | -2.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4436 | ryeC | -1.0 | -0.7 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b3613 | yibP | -1.0 | -1.6 | putative membrane protein (VIMSS) | compare |
| b4538 | yoeF | -1.0 | -0.6 | hypothetical protein (RefSeq) | compare |
| b3911 | cpxA | -1.0 | -4.8 | two-component sensor protein (NCBI) | compare |
| b1764 | selD | -1.0 | -2.5 | selenophosphate synthetase (NCBI) | compare |
| b1823 | cspC | -1.0 | -0.9 | stress protein, member of the CspA-family (NCBI) | compare |
| b4547 | ypfN | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b3002 | yqhA | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b4453 | ldrD | -1.0 | -1.1 | toxic polypeptide, small (NCBI) | compare |
| b0962 | helD | -1.0 | -3.0 | DNA helicase IV (NCBI) | compare |
| b3999 | yjaG | -1.0 | -2.8 | hypothetical protein (NCBI) | compare |
| b1524 | yneH | -1.0 | -0.3 | predicted glutaminase (NCBI) | compare |
| b0920 | ycbC | -1.0 | -2.2 | conserved inner membrane protein (NCBI) | compare |
| b3672 | ivbL | -1.0 | -2.0 | ilvB operon leader peptide (NCBI) | compare |
| b2876 | b2876 | -1.0 | -3.7 | orf, hypothetical protein (VIMSS) | compare |
| b4312 | fimB | -1.0 | -6.0 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b4317 | fimD | -1.0 | -8.9 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b1539 | ydfG | -1.0 | -1.8 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b3631 | rfaG | -1.0 | -6.8 | glucosyltransferase I (NCBI) | compare |
| b4375 | prfC | -1.0 | -2.7 | peptide chain release factor 3 (NCBI) | compare |
| b1126 | potA | -1.0 | -3.1 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2343 | b2343 | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b3786 | rffE | -1.0 | -5.4 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3761 | trpT | -1.0 | -0.5 | tRNA-Trp (NCBI) | compare |
| b4544 | yfbW | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b3042 | b3042 | -1.0 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0053 | surA | -1.0 | -1.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b4522 | yciX_1 | -1.0 | -1.2 | hypothetical protein (NCBI) | compare |
| b0723 | sdhA | -0.9 | -5.6 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0439 | lon | -0.9 | -2.9 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4102 | phnF | -0.9 | -2.9 | predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (NCBI) | compare |
| b3169 | nusA | -0.9 | -1.4 | transcription elongation factor NusA (NCBI) | compare |
| b3933 | ftsN | -0.9 | -3.9 | essential cell division protein (NCBI) | compare |
| b2783 | chpR | -0.9 | -1.1 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b0728 | sucC | -0.9 | -3.4 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0676 | nagC | -0.9 | -4.1 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b1710 | btuE | -0.9 | -1.5 | predicted glutathione peroxidase (NCBI) | compare |
| b3035 | tolC | -0.9 | -4.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0623 | cspE | -0.9 | -0.7 | cold shock protein E (NCBI) | compare |
| b2501 | ppk | -0.9 | -3.7 | polyphosphate kinase (NCBI) | compare |
| b1423 | ydcJ | -0.9 | -1.1 | hypothetical protein (NCBI) | compare |
| b3493 | pitA | -0.9 | -3.8 | phosphate transporter, low-affinity (NCBI) | compare |
| b2007 | yeeX | -0.9 | -1.6 | conserved protein (RefSeq) | compare |
| b3609 | secB | -0.9 | -1.4 | export protein SecB (NCBI) | compare |
| b2175 | spr | -0.9 | -1.8 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1176 | minC | -0.9 | -1.2 | septum formation inhibitor (NCBI) | compare |
| b0864 | artP | -0.9 | -1.5 | arginine transporter subunit (NCBI) | compare |
| b1355 | b1355 | -0.9 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1362 | rzpR | -0.9 | -1.0 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b4025 | pgi | -0.9 | -4.0 | glucose-6-phosphate isomerase (NCBI) | compare |
| b4353 | yjiX | -0.9 | -2.7 | hypothetical protein (NCBI) | compare |
| b2528 | iscA | -0.9 | -0.6 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4513 | kdpF | -0.9 | -1.0 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2285 | nuoE | -0.9 | -0.9 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1138 | ymfE | -0.9 | -0.5 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b2894 | xerD | -0.9 | -0.4 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4202 | rpsR | -0.9 | -0.4 | 30S ribosomal protein S18 (NCBI) | compare |
| b2683 | ygaH | -0.9 | -2.6 | predicted inner membrane protein (NCBI) | compare |
| b1225 | narH | -0.9 | -2.6 | nitrate reductase 1, beta (Fe-S) subunit (NCBI) | compare |
| b1630 | rsxD | -0.9 | -2.5 | electron transport complex protein RnfD (NCBI) | compare |
| b0183 | rnhB | -0.9 | -1.5 | ribonuclease HII (NCBI) | compare |
| b2488 | hyfH | -0.9 | -1.3 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b3995 | rsd | -0.9 | -3.0 | stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) | compare |
| b0440 | hupB | -0.9 | -2.0 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b0866 | ybjQ | -0.9 | -0.5 | hypothetical protein (NCBI) | compare |
| b1853 | yebK | -0.9 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4232 | fbp | -0.9 | -4.6 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b1729 | ydjN | -0.9 | -1.8 | predicted transporter (NCBI) | compare |
| b3021 | ygiT | -0.9 | -0.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |