| | gene | name | fitness | t score | description | |
|---|
| b0222 | lpcA | -3.1 | -4.1 | phosphoheptose isomerase (NCBI) | compare |
| b3816 | corA | -3.1 | -11.4 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0053 | surA | -2.8 | -4.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2620 | smpB | -2.7 | -1.8 | SsrA-binding protein (NCBI) | compare |
| b1291 | sapD | -2.7 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1882 | cheY | -2.5 | -1.0 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1861 | ruvA | -2.4 | -2.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1860 | ruvB | -2.2 | -2.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b3811 | xerC | -2.1 | -1.5 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3778 | rep | -2.1 | -8.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3183 | obgE | -2.0 | -1.4 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2284 | nuoF | -2.0 | -5.0 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b4042 | dgkA | -1.9 | -1.8 | diacylglycerol kinase (NCBI) | compare |
| b3169 | nusA | -1.9 | -3.3 | transcription elongation factor NusA (NCBI) | compare |
| b2283 | nuoG | -1.8 | -8.0 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2567 | rnc | -1.8 | -1.2 | ribonuclease III (NCBI) | compare |
| b0049 | apaH | -1.8 | -2.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b2276 | nuoN | -1.7 | -5.1 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1286 | rnb | -1.7 | -3.1 | exoribonuclease II (NCBI) | compare |
| b0739 | tolA | -1.7 | -3.6 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2168 | fruK | -1.7 | -2.0 | 1-phosphofructokinase (NCBI) | compare |
| b3636 | rpmG | -1.6 | -2.0 | 50S ribosomal protein L33 (NCBI) | compare |
| b3405 | ompR | -1.6 | -4.8 | osmolarity response regulator (NCBI) | compare |
| b2278 | nuoL | -1.6 | -7.8 | NADH dehydrogenase subunit L (NCBI) | compare |
| b0439 | lon | -1.5 | -5.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0737 | tolQ | -1.5 | -2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0630 | lipB | -1.5 | -1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2282 | nuoH | -1.5 | -2.9 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2330 | yfcB | -1.5 | -2.5 | putative adenine-specific methylase (VIMSS) | compare |
| b0890 | ftsK | -1.5 | -3.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2277 | nuoM | -1.5 | -6.2 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0740 | tolB | -1.5 | -3.9 | translocation protein TolB precursor (NCBI) | compare |
| b3500 | gor | -1.4 | -1.9 | glutathione reductase (NCBI) | compare |
| b2280 | nuoJ | -1.4 | -4.6 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2281 | nuoI | -1.4 | -3.1 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2518 | ndk | -1.3 | -2.9 | nucleoside diphosphate kinase (NCBI) | compare |
| b2287 | nuoB | -1.3 | -2.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1164 | ycgZ | -1.3 | -2.0 | hypothetical protein (NCBI) | compare |
| b2498 | upp | -1.3 | -2.7 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2285 | nuoE | -1.3 | -2.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3844 | fre | -1.3 | -5.7 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3863 | polA | -1.3 | -1.6 | DNA polymerase I (NCBI) | compare |
| b1176 | minC | -1.3 | -3.3 | septum formation inhibitor (NCBI) | compare |
| b0726 | sucA | -1.3 | -4.0 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0683 | fur | -1.3 | -1.2 | ferric uptake regulator (NCBI) | compare |
| b3390 | aroK | -1.3 | -1.9 | shikimate kinase I (NCBI) | compare |
| b3026 | qseC | -1.3 | -3.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2286 | nuoC | -1.2 | -3.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b4458 | oxyS | -1.1 | -1.4 | global regulatory RNA (NCBI) | compare |
| b1259 | yciG | -1.1 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3806 | cyaA | -1.1 | -4.4 | adenylate cyclase (NCBI) | compare |
| b3021 | ygiT | -1.1 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2288 | nuoA | -1.1 | -2.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0721 | sdhC | -1.1 | -4.9 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2895 | fldB | -1.1 | -2.8 | flavodoxin 2 (NCBI) | compare |
| b3706 | trmE | -1.1 | -3.5 | tRNA modification GTPase (NCBI) | compare |
| b1361 | ydaW | -1.0 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0438 | clpX | -1.0 | -4.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1600 | mdtJ | -1.0 | -2.0 | multidrug efflux system transporter (NCBI) | compare |
| b3839 | tatC | -1.0 | -3.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2279 | nuoK | -1.0 | -1.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4139 | aspA | -1.0 | -6.7 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b4146 | yjeK | -1.0 | -1.7 | predicted lysine aminomutase (NCBI) | compare |
| b1951 | rcsA | -1.0 | -1.1 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b3613 | yibP | -1.0 | -2.5 | putative membrane protein (VIMSS) | compare |
| b0722 | sdhD | -1.0 | -2.9 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b3236 | mdh | -1.0 | -5.4 | malate dehydrogenase (NCBI) | compare |
| b1175 | minD | -1.0 | -4.1 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0888 | trxB | -1.0 | -2.4 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4538 | yoeF | -0.9 | -1.7 | hypothetical protein (RefSeq) | compare |
| b1105 | ycfM | -0.9 | -3.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0357 | yaiN | -0.9 | -1.7 | putative alpha helix chain (VIMSS) | compare |
| b0723 | sdhA | -0.9 | -6.4 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1527 | yneK | -0.9 | -1.7 | hypothetical protein (NCBI) | compare |
| b2830 | nudH | -0.9 | -0.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3621 | rfaC | -0.9 | -3.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2897 | ygfY | -0.9 | -1.5 | hypothetical protein (NCBI) | compare |
| b1160 | elbA | -0.9 | -1.1 | hypothetical protein (NCBI) | compare |
| b0720 | gltA | -0.9 | -4.0 | citrate synthase (NCBI) | compare |
| b2504 | yfgG | -0.9 | -1.2 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b2894 | xerD | -0.9 | -1.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4647 | mokA | -0.9 | -0.8 | no description | compare |
| b3052 | rfaE | -0.9 | -3.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3620 | rfaF | -0.9 | -3.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2501 | ppk | -0.9 | -5.2 | polyphosphate kinase (NCBI) | compare |
| b3443 | yrhA | -0.9 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0965 | b0965 | -0.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3619 | rfaD | -0.8 | -1.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2318 | truA | -0.8 | -2.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3658 | selC | -0.8 | -2.6 | tRNA-Sec (NCBI) | compare |
| b1183 | umuD | -0.8 | -1.2 | DNA polymerase V, subunit D (NCBI) | compare |
| b3741 | gidA | -0.8 | -2.3 | glucose-inhibited division protein A (NCBI) | compare |
| b3916 | pfkA | -0.8 | -1.5 | 6-phosphofructokinase (NCBI) | compare |
| b2650 | ypjC | -0.8 | -0.4 | hypothetical protein (RefSeq) | compare |
| b4513 | kdpF | -0.8 | -2.3 | potassium ion accessory transporter subunit (NCBI) | compare |
| b4685 | yrbN | -0.8 | -1.9 | expressed protein (RefSeq) | compare |
| b0200 | gmhB | -0.8 | -0.9 | hypothetical protein (NCBI) | compare |
| b4557 | yidD | -0.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b1159 | mcrA | -0.8 | -1.2 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b1863 | ruvC | -0.8 | -1.3 | Holliday junction resolvase (NCBI) | compare |
| b2935 | tktA | -0.8 | -1.2 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1855 | lpxM | -0.8 | -2.9 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0728 | sucC | -0.8 | -4.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1712 | ihfA | -0.8 | -1.1 | integration host factor subunit alpha (NCBI) | compare |
| b0724 | sdhB | -0.8 | -4.2 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0738 | tolR | -0.8 | -1.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3414 | gntY | -0.8 | -2.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b0149 | mrcB | -0.8 | -5.7 | penicillin-binding protein 1b (NCBI) | compare |
| b2579 | yfiD | -0.7 | -1.5 | pyruvate formate lyase subunit (NCBI) | compare |
| b4202 | rpsR | -0.7 | -1.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b0080 | fruR | -0.7 | -3.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3609 | secB | -0.7 | -2.5 | export protein SecB (NCBI) | compare |
| b4172 | hfq | -0.7 | -0.5 | RNA-binding protein Hfq (NCBI) | compare |
| b4481 | rffT | -0.7 | -3.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2569 | lepA | -0.7 | -2.4 | GTP-binding protein LepA (NCBI) | compare |
| b3281 | aroE | -0.7 | -5.7 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b1084 | rne | -0.7 | -3.4 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b0741 | pal | -0.7 | -2.2 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1594 | dgsA | -0.7 | -2.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4179 | vacB | -0.7 | -3.1 | putative enzyme (VIMSS) | compare |
| b4388 | serB | -0.7 | -4.5 | 3-phosphoserine phosphatase (NCBI) | compare |
| b3387 | dam | -0.7 | -5.3 | DNA adenine methylase (NCBI) | compare |
| b1357 | ydaS | -0.7 | -1.8 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4676 | yoaK | -0.7 | -0.4 | expressed protein (RefSeq) | compare |
| b3162 | deaD | -0.7 | -2.6 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2911 | ssrS | -0.7 | -1.4 | 6S regulatory RNA (NCBI) | compare |
| b4493 | gapC | -0.7 | -1.9 | no description | compare |
| b0428 | cyoE | -0.7 | -3.6 | protoheme IX farnesyltransferase (NCBI) | compare |
| b3849 | trkH | -0.7 | -4.7 | potassium transporter (NCBI) | compare |
| b1793 | yoaF | -0.7 | -2.1 | conserved outer membrane protein (NCBI) | compare |
| b0386 | proC | -0.7 | -2.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1192 | ldcA | -0.7 | -2.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b1143 | ymfI | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1804 | rnd | -0.7 | -2.1 | ribonuclease D (NCBI) | compare |
| b0431 | cyoB | -0.7 | -4.8 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3237 | argR | -0.7 | -2.1 | arginine repressor (NCBI) | compare |
| b0247 | ykfG | -0.7 | -1.0 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b2597 | yfiA | -0.7 | -1.4 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0989 | cspH | -0.7 | -1.8 | stress protein, member of the CspA-family (NCBI) | compare |
| b1001 | yccE | -0.7 | -0.4 | hypothetical protein (NCBI) | compare |
| b4178 | yjeB | -0.6 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0677 | nagA | -0.6 | -2.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0471 | ybaB | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b0623 | cspE | -0.6 | -1.4 | cold shock protein E (NCBI) | compare |
| b1709 | btuD | -0.6 | -0.6 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1613 | manA | -0.6 | -1.5 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b0454 | ybaZ | -0.6 | -2.4 | predicted methyltransferase (NCBI) | compare |
| b3075 | ebgR | -0.6 | -2.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2646 | ypjF | -0.6 | -1.1 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b3068 | ygjF | -0.6 | -2.0 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b2906 | visC | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b2188 | yejM | -0.6 | -3.9 | predicted hydrolase, inner membrane (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b2678 | proW | -0.6 | -3.7 | glycine betaine transporter subunit (NCBI) | compare |
| b1693 | aroD | -0.6 | -2.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2905 | gcvT | -0.6 | -3.5 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b1677 | lpp | -0.6 | -1.3 | murein lipoprotein (NCBI) | compare |
| b0928 | aspC | -0.6 | -2.5 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b1238 | tdk | -0.6 | -3.1 | thymidine kinase (NCBI) | compare |
| b3791 | rffA | -0.6 | -3.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4451 | ryhB | -0.6 | -1.1 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b1074 | flgC | -0.6 | -1.8 | flagellar basal-body rod protein C (NCBI) | compare |
| b1536 | ydeI | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b1236 | galU | -0.6 | -2.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3786 | rffE | -0.6 | -4.6 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1182 | hlyE | -0.6 | -0.4 | hemolysin E (VIMSS) | compare |
| b1984 | asnW | -0.6 | -0.7 | tRNA-Asn (NCBI) | compare |
| b3204 | ptsN | -0.6 | -1.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2576 | srmB | -0.6 | -1.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b3940 | metL | -0.6 | -3.7 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b0018 | mokC | -0.6 | -0.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3389 | aroB | -0.6 | -3.6 | 3-dehydroquinate synthase (NCBI) | compare |
| b1482 | osmC | -0.6 | -1.6 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3884 | yihW | -0.6 | -3.1 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b2688 | gshA | -0.6 | -3.0 | glutamate--cysteine ligase (NCBI) | compare |
| b2614 | grpE | -0.6 | -1.4 | heat shock protein (NCBI) | compare |
| b0437 | clpP | -0.6 | -2.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3742 | mioC | -0.6 | -1.9 | flavodoxin (NCBI) | compare |
| b0430 | cyoC | -0.6 | -1.9 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b0688 | pgm | -0.6 | -1.6 | phosphoglucomutase (NCBI) | compare |
| b2700 | ygaD | -0.6 | -2.6 | competence damage-inducible protein A (NCBI) | compare |
| b1620 | malI | -0.6 | -1.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4509 | ylcG | -0.5 | -1.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3950 | frwB | -0.5 | -1.6 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b1739 | osmE | -0.5 | -1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b0099 | mutT | -0.5 | -2.9 | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP (NCBI) | compare |
| b2101 | yegW | -0.5 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1302 | puuE | -0.5 | -1.6 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b1754 | b1754 | -0.5 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1025 | ycdT | -0.5 | -1.0 | predicted diguanylate cyclase (NCBI) | compare |
| b3341 | rpsG | -0.5 | -0.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b1235 | rssB | -0.5 | -3.4 | response regulator of RpoS (NCBI) | compare |
| b0432 | cyoA | -0.5 | -3.6 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b1121 | ycfZ | -0.5 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b1109 | ndh | -0.5 | -1.7 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b4585 | sroB | -0.5 | -0.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b1165 | ymgA | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1612 | fumA | -0.5 | -1.9 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b0921 | smtA | -0.5 | -2.1 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b0784 | moaD | -0.5 | -1.3 | molybdopterin synthase, small subunit (NCBI) | compare |