| | gene | name | fitness | t score | description | |
|---|
| b0049 | apaH | -2.7 | -3.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b4503 | yafF | -2.7 | -1.6 | no description | compare |
| b4202 | rpsR | -2.7 | -2.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b3390 | aroK | -2.6 | -3.1 | shikimate kinase I (NCBI) | compare |
| b1882 | cheY | -2.6 | -1.0 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3341 | rpsG | -2.5 | -2.2 | 30S ribosomal protein S7 (NCBI) | compare |
| b3021 | ygiT | -2.4 | -2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1361 | ydaW | -2.3 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1863 | ruvC | -2.2 | -3.3 | Holliday junction resolvase (NCBI) | compare |
| b0683 | fur | -2.2 | -1.5 | ferric uptake regulator (NCBI) | compare |
| b0738 | tolR | -2.2 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2168 | fruK | -1.9 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b3405 | ompR | -1.8 | -5.1 | osmolarity response regulator (NCBI) | compare |
| b0053 | surA | -1.7 | -4.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3619 | rfaD | -1.7 | -3.2 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2894 | xerD | -1.7 | -1.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1192 | ldcA | -1.7 | -4.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b1861 | ruvA | -1.7 | -1.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3026 | qseC | -1.6 | -2.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0739 | tolA | -1.6 | -2.4 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4647 | mokA | -1.6 | -1.1 | no description | compare |
| b0888 | trxB | -1.6 | -3.8 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3778 | rep | -1.5 | -7.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1293 | sapB | -1.5 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3183 | obgE | -1.5 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4585 | sroB | -1.5 | -1.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b3863 | polA | -1.5 | -1.7 | DNA polymerase I (NCBI) | compare |
| b1290 | sapF | -1.5 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3205 | yhbJ | -1.4 | -3.9 | hypothetical protein (NCBI) | compare |
| b1628 | rsxB | -1.4 | -3.7 | electron transport complex protein RnfB (NCBI) | compare |
| b3839 | tatC | -1.4 | -5.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3621 | rfaC | -1.4 | -4.5 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1648 | b1648 | -1.3 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3781 | trxA | -1.3 | -3.0 | thioredoxin 1 (VIMSS) | compare |
| b1573 | ydfC | -1.3 | -2.0 | Qin prophage; predicted protein (RefSeq) | compare |
| b3387 | dam | -1.2 | -8.2 | DNA adenine methylase (NCBI) | compare |
| b0437 | clpP | -1.2 | -4.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4570 | lomR | -1.2 | -1.1 | no description | compare |
| b0688 | pgm | -1.2 | -2.9 | phosphoglucomutase (NCBI) | compare |
| b3636 | rpmG | -1.2 | -1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b0439 | lon | -1.2 | -4.1 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2017 | yefM | -1.2 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3816 | corA | -1.1 | -5.7 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b4294 | insA-7 | -1.1 | -2.1 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b4191 | ulaR | -1.1 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1566 | flxA | -1.1 | -2.6 | Qin prophage; predicted protein (NCBI) | compare |
| b0740 | tolB | -1.1 | -2.2 | translocation protein TolB precursor (NCBI) | compare |
| b3792 | wzxE | -1.1 | -5.4 | O-antigen translocase (NCBI) | compare |
| b2642 | yfjW | -1.1 | -1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1286 | rnb | -1.1 | -2.0 | exoribonuclease II (NCBI) | compare |
| b1160 | elbA | -1.1 | -1.0 | hypothetical protein (NCBI) | compare |
| b4414 | tff | -1.1 | -1.8 | unknown RNA (NCBI) | compare |
| b0890 | ftsK | -1.0 | -2.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0200 | gmhB | -1.0 | -1.0 | hypothetical protein (NCBI) | compare |
| b2287 | nuoB | -1.0 | -3.1 | NADH dehydrogenase subunit B (NCBI) | compare |
| b3250 | mreC | -1.0 | -1.7 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b4146 | yjeK | -1.0 | -0.7 | predicted lysine aminomutase (NCBI) | compare |
| b3052 | rfaE | -1.0 | -3.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3791 | rffA | -1.0 | -5.1 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1942 | fliJ | -1.0 | -1.4 | flagellar biosynthesis chaperone (NCBI) | compare |
| b2282 | nuoH | -1.0 | -2.3 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1346 | ydaQ | -1.0 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3620 | rfaF | -1.0 | -3.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3181 | greA | -0.9 | -2.3 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2808 | gcvA | -0.9 | -2.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0741 | pal | -0.9 | -2.2 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3169 | nusA | -0.9 | -2.5 | transcription elongation factor NusA (NCBI) | compare |
| b2195 | ccmG | -0.9 | -2.7 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b3935 | priA | -0.9 | -1.5 | primosome assembly protein PriA (NCBI) | compare |
| b3229 | sspA | -0.9 | -2.0 | stringent starvation protein A (NCBI) | compare |
| b0263 | afuB | -0.9 | -1.7 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b1847 | yebF | -0.9 | -1.5 | predicted protein (RefSeq) | compare |
| b2814 | metZ | -0.9 | -1.4 | tRNA-Met (NCBI) | compare |
| b3465 | yhhF | -0.9 | -4.0 | predicted methyltransferase (NCBI) | compare |
| b0912 | ihfB | -0.9 | -2.1 | integration host factor subunit beta (NCBI) | compare |
| b1685 | ydiH | -0.9 | -1.3 | predicted protein (RefSeq) | compare |
| b1175 | minD | -0.9 | -3.0 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2419 | yfeK | -0.9 | -2.0 | hypothetical protein (NCBI) | compare |
| b0145 | dksA | -0.9 | -2.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1219 | ychN | -0.9 | -3.3 | hypothetical protein (NCBI) | compare |
| b2897 | ygfY | -0.9 | -3.1 | hypothetical protein (NCBI) | compare |
| b2846 | yqeH | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1712 | ihfA | -0.8 | -1.2 | integration host factor subunit alpha (NCBI) | compare |
| b1551 | b1551 | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0149 | mrcB | -0.8 | -6.1 | penicillin-binding protein 1b (NCBI) | compare |
| b4529 | ydbJ | -0.8 | -0.8 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -0.8 | -1.9 | glucose-inhibited division protein A (NCBI) | compare |
| b2340 | sixA | -0.8 | -3.1 | phosphohistidine phosphatase (NCBI) | compare |
| b1550 | b1550 | -0.8 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3164 | pnp | -0.8 | -2.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3916 | pfkA | -0.8 | -1.2 | 6-phosphofructokinase (NCBI) | compare |
| b4203 | rplI | -0.8 | -2.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b4201 | priB | -0.8 | -1.2 | primosomal replication protein N (NCBI) | compare |
| b1686 | ydiI | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b4603 | rseX | -0.8 | -0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1709 | btuD | -0.8 | -0.8 | vitamin B12-transporter ATPase (NCBI) | compare |
| b0928 | aspC | -0.8 | -4.6 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b4551 | yheV | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b0340 | cynS | -0.8 | -2.9 | cyanate hydratase (NCBI) | compare |
| b0018 | mokC | -0.8 | -1.0 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b0386 | proC | -0.7 | -2.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0161 | degP | -0.7 | -3.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b1182 | hlyE | -0.7 | -0.5 | hemolysin E (VIMSS) | compare |
| b3842 | rfaH | -0.7 | -2.7 | transcriptional activator RfaH (NCBI) | compare |
| b1105 | ycfM | -0.7 | -2.6 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0902 | pflA | -0.7 | -3.8 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1279 | yciS | -0.7 | -0.8 | conserved inner membrane protein (NCBI) | compare |
| b3613 | yibP | -0.7 | -1.5 | putative membrane protein (VIMSS) | compare |
| b2284 | nuoF | -0.7 | -2.7 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1292 | sapC | -0.7 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3652 | recG | -0.7 | -4.5 | ATP-dependent DNA helicase (NCBI) | compare |
| b1291 | sapD | -0.7 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1383 | ydbL | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3162 | deaD | -0.7 | -2.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1070 | flgN | -0.7 | -1.0 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b0870 | ltaE | -0.7 | -3.5 | L-allo-threonine aldolase, PLP-dependent (NCBI) | compare |
| b0767 | ybhE | -0.7 | -1.8 | 6-phosphogluconolactonase (NCBI) | compare |
| b2145 | yeiS | -0.7 | -1.9 | predicted inner membrane protein (NCBI) | compare |
| b4509 | ylcG | -0.7 | -2.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3623 | rfaK | -0.7 | -1.3 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b3210 | arcB | -0.7 | -3.9 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2281 | nuoI | -0.7 | -1.9 | NADH dehydrogenase subunit I (NCBI) | compare |
| b4557 | yidD | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b2617 | smpA | -0.7 | -1.5 | small membrane protein A (VIMSS) | compare |
| b3237 | argR | -0.7 | -2.2 | arginine repressor (NCBI) | compare |
| b1503 | ydeR | -0.7 | -2.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3706 | trmE | -0.7 | -2.2 | tRNA modification GTPase (NCBI) | compare |
| b2277 | nuoM | -0.7 | -2.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2501 | ppk | -0.7 | -4.0 | polyphosphate kinase (NCBI) | compare |
| b2188 | yejM | -0.7 | -4.6 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0737 | tolQ | -0.7 | -1.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4577 | sgrS | -0.6 | -1.0 | small antisense RNA (NCBI) | compare |
| b2329 | aroC | -0.6 | -2.4 | chorismate synthase (NCBI) | compare |
| b1258 | yciF | -0.6 | -0.7 | hypothetical protein (NCBI) | compare |
| b2947 | gshB | -0.6 | -1.9 | glutathione synthetase (NCBI) | compare |
| b2445 | yffN | -0.6 | -2.4 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1855 | lpxM | -0.6 | -2.4 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0677 | nagA | -0.6 | -2.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0222 | lpcA | -0.6 | -1.4 | phosphoheptose isomerase (NCBI) | compare |
| b1658 | purR | -0.6 | -2.6 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3226 | yhcK | -0.6 | -2.8 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b1161 | ycgX | -0.6 | -0.7 | hypothetical protein (NCBI) | compare |
| b0535 | fimZ | -0.6 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4319 | fimG | -0.6 | -3.1 | minor component of type 1 fimbriae (NCBI) | compare |
| b3871 | bipA | -0.6 | -3.6 | GTP-binding protein (NCBI) | compare |
| b1236 | galU | -0.6 | -2.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2175 | spr | -0.6 | -2.6 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0782 | moaB | -0.6 | -1.3 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b1607 | ydgC | -0.6 | -0.9 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b0438 | clpX | -0.6 | -3.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1357 | ydaS | -0.6 | -1.0 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4041 | plsB | -0.6 | -1.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b2830 | nudH | -0.6 | -0.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0088 | murD | -0.6 | -1.6 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1693 | aroD | -0.6 | -2.2 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b4184 | yjfL | -0.6 | -2.4 | conserved inner membrane protein (NCBI) | compare |
| b1143 | ymfI | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4552 | yrhC | -0.6 | -0.5 | no description | compare |
| b0051 | ksgA | -0.6 | -1.9 | dimethyladenosine transferase (NCBI) | compare |
| b2110 | yehC | -0.6 | -0.5 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b2276 | nuoN | -0.6 | -2.1 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b4481 | rffT | -0.6 | -2.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4593 | ymgI | -0.6 | -0.6 | hypothetical protein (RefSeq) | compare |
| b2659 | b2659 | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0234 | yafP | -0.6 | -0.4 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4418 | sraB | -0.6 | -1.3 | unknown RNA (NCBI) | compare |
| b1799 | yeaT | -0.6 | -2.3 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b0407 | yajC | -0.6 | -1.4 | preprotein translocase subunit YajC (NCBI) | compare |
| b0632 | dacA | -0.6 | -3.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1811 | yoaH | -0.6 | -2.1 | hypothetical protein (NCBI) | compare |
| b3404 | envZ | -0.6 | -3.4 | osmolarity sensor protein (NCBI) | compare |
| b4312 | fimB | -0.6 | -4.0 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1567 | intK | -0.6 | -1.5 | Qin prophage; predicted protein (RefSeq) | compare |
| b3035 | tolC | -0.6 | -3.6 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3811 | xerC | -0.6 | -0.8 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3629 | rfaS | -0.6 | -1.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1438 | ydcQ | -0.6 | -1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3911 | cpxA | -0.5 | -4.0 | two-component sensor protein (NCBI) | compare |
| b0364 | yaiS | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1961 | dcm | -0.5 | -1.0 | DNA cytosine methylase (NCBI) | compare |
| b3107 | yhaL | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3545 | proK | -0.5 | -1.3 | tRNA-Pro (NCBI) | compare |
| b4644 | ypjI | -0.5 | -1.8 | no description | compare |
| b1754 | b1754 | -0.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2278 | nuoL | -0.5 | -3.3 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4567 | yjjZ | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b1506 | yneL | -0.5 | -1.0 | predicted transcriptional regulator (NCBI) | compare |
| b0724 | sdhB | -0.5 | -2.8 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3389 | aroB | -0.5 | -2.9 | 3-dehydroquinate synthase (NCBI) | compare |
| b1129 | phoQ | -0.5 | -0.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0881 | clpS | -0.5 | -1.1 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1414 | ydcF | -0.5 | -2.6 | hypothetical protein (NCBI) | compare |
| b2784 | relA | -0.5 | -3.4 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b1591 | b1591 | -0.5 | -0.9 | putative oxidoreductase component (VIMSS) | compare |
| b2363 | yfdT | -0.5 | -1.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2820 | recB | -0.5 | -0.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0249 | ykfF | -0.5 | -1.7 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b1256 | ompW | -0.5 | -3.4 | outer membrane protein W (NCBI) | conserved |
| b0216 | aspV | -0.5 | -2.2 | tRNA-Asp (NCBI) | compare |
| b1821 | b1821 | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |