| | gene | name | fitness | t score | description | |
|---|
| b1863 | ruvC | -3.9 | -3.8 | Holliday junction resolvase (NCBI) | compare |
| b4202 | rpsR | -3.4 | -2.3 | 30S ribosomal protein S18 (NCBI) | compare |
| b3021 | ygiT | -3.0 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0142 | folK | -3.0 | -1.2 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2620 | smpB | -2.5 | -1.7 | SsrA-binding protein (NCBI) | compare |
| b1860 | ruvB | -2.5 | -1.7 | Holliday junction DNA helicase B (NCBI) | compare |
| b0683 | fur | -2.4 | -2.3 | ferric uptake regulator (NCBI) | compare |
| b1550 | b1550 | -2.3 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1291 | sapD | -2.2 | -2.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0738 | tolR | -2.1 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3341 | rpsG | -1.9 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b3082 | ygjM | -1.9 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2894 | xerD | -1.9 | -1.2 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2830 | nudH | -1.8 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2939 | yqgB | -1.8 | -2.0 | predicted protein (RefSeq) | compare |
| b2567 | rnc | -1.8 | -1.2 | ribonuclease III (NCBI) | compare |
| b3816 | corA | -1.8 | -7.1 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0053 | surA | -1.7 | -4.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1861 | ruvA | -1.6 | -1.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1573 | ydfC | -1.6 | -1.9 | Qin prophage; predicted protein (RefSeq) | compare |
| b3390 | aroK | -1.5 | -2.9 | shikimate kinase I (NCBI) | compare |
| b1607 | ydgC | -1.5 | -1.5 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b0890 | ftsK | -1.4 | -3.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0730 | mngR | -1.4 | -1.9 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1236 | galU | -1.4 | -4.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1104 | ycfL | -1.4 | -2.1 | hypothetical protein (NCBI) | compare |
| b2444 | yffM | -1.3 | -3.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0222 | lpcA | -1.3 | -2.4 | phosphoheptose isomerase (NCBI) | compare |
| b1160 | elbA | -1.3 | -1.2 | hypothetical protein (NCBI) | compare |
| b3977 | tyrU | -1.3 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b0439 | lon | -1.3 | -4.9 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1476 | fdnI | -1.3 | -1.0 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0049 | apaH | -1.2 | -2.6 | diadenosinetetraphosphatase (NCBI) | compare |
| b1429 | tehA | -1.2 | -1.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4552 | yrhC | -1.2 | -0.7 | no description | compare |
| b4503 | yafF | -1.2 | -0.9 | no description | compare |
| b1677 | lpp | -1.2 | -3.2 | murein lipoprotein (NCBI) | compare |
| b3619 | rfaD | -1.1 | -3.2 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3405 | ompR | -1.1 | -3.5 | osmolarity response regulator (NCBI) | compare |
| b3250 | mreC | -1.1 | -2.0 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1942 | fliJ | -1.1 | -1.6 | flagellar biosynthesis chaperone (NCBI) | compare |
| b0888 | trxB | -1.1 | -3.2 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4414 | tff | -1.1 | -2.3 | unknown RNA (NCBI) | compare |
| b3916 | pfkA | -1.1 | -1.3 | 6-phosphofructokinase (NCBI) | compare |
| b4191 | ulaR | -1.1 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3162 | deaD | -1.1 | -3.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4653 | yicT | -1.0 | -1.2 | no description | compare |
| b3052 | rfaE | -1.0 | -3.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3863 | polA | -1.0 | -1.3 | DNA polymerase I (NCBI) | compare |
| b3107 | yhaL | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3778 | rep | -1.0 | -5.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1551 | b1551 | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0989 | cspH | -1.0 | -2.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b1847 | yebF | -1.0 | -1.5 | predicted protein (RefSeq) | compare |
| b2846 | yqeH | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b4529 | ydbJ | -0.9 | -0.9 | hypothetical protein (NCBI) | compare |
| b4685 | yrbN | -0.9 | -2.4 | expressed protein (RefSeq) | compare |
| b3164 | pnp | -0.9 | -2.3 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3237 | argR | -0.9 | -2.6 | arginine repressor (NCBI) | compare |
| b3871 | bipA | -0.9 | -5.9 | GTP-binding protein (NCBI) | compare |
| b1493 | gadB | -0.9 | -1.0 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1143 | ymfI | -0.9 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3706 | trmE | -0.9 | -2.8 | tRNA modification GTPase (NCBI) | compare |
| b2282 | nuoH | -0.9 | -2.4 | NADH dehydrogenase subunit H (NCBI) | compare |
| b4402 | yjjY | -0.9 | -0.8 | hypothetical protein (NCBI) | compare |
| b2953 | yggU | -0.9 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0630 | lipB | -0.9 | -0.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4631 | ykgQ | -0.9 | -1.3 | no description | compare |
| b0990 | cspG | -0.9 | -0.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1730 | ydjO | -0.9 | -1.1 | predicted protein (RefSeq) | compare |
| b0549 | ybcO | -0.9 | -2.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0912 | ihfB | -0.9 | -2.8 | integration host factor subunit beta (NCBI) | compare |
| b3426 | glpD | -0.8 | -1.8 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b0767 | ybhE | -0.8 | -2.9 | 6-phosphogluconolactonase (NCBI) | compare |
| b3414 | gntY | -0.8 | -3.9 | predicted gluconate transport associated protein (NCBI) | compare |
| b1951 | rcsA | -0.8 | -1.2 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b2017 | yefM | -0.8 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2343 | b2343 | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4522 | yciX_1 | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b4042 | dgkA | -0.8 | -1.4 | diacylglycerol kinase (NCBI) | compare |
| b2363 | yfdT | -0.8 | -1.7 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b4146 | yjeK | -0.8 | -1.0 | predicted lysine aminomutase (NCBI) | compare |
| b1506 | yneL | -0.8 | -1.1 | predicted transcriptional regulator (NCBI) | compare |
| b2287 | nuoB | -0.8 | -1.7 | NADH dehydrogenase subunit B (NCBI) | compare |
| b3792 | wzxE | -0.8 | -4.1 | O-antigen translocase (NCBI) | compare |
| b2168 | fruK | -0.8 | -0.9 | 1-phosphofructokinase (NCBI) | compare |
| b2283 | nuoG | -0.8 | -3.7 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1628 | rsxB | -0.8 | -1.4 | electron transport complex protein RnfB (NCBI) | compare |
| b4294 | insA-7 | -0.8 | -2.1 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b1478 | adhP | -0.8 | -2.3 | alcohol dehydrogenase (VIMSS) | compare |
| b1138 | ymfE | -0.8 | -1.2 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1175 | minD | -0.8 | -2.4 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3613 | yibP | -0.8 | -1.7 | putative membrane protein (VIMSS) | compare |
| b0149 | mrcB | -0.8 | -5.6 | penicillin-binding protein 1b (NCBI) | compare |
| b4592 | yccB | -0.7 | -1.2 | hypothetical protein (RefSeq) | compare |
| b2289 | lrhA | -0.7 | -5.1 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b3811 | xerC | -0.7 | -1.0 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1712 | ihfA | -0.7 | -1.2 | integration host factor subunit alpha (NCBI) | compare |
| b4369 | leuP | -0.7 | -1.2 | tRNA-Leu (NCBI) | compare |
| b0858 | ybjO | -0.7 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b1620 | malI | -0.7 | -1.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0438 | clpX | -0.7 | -3.5 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2646 | ypjF | -0.7 | -1.8 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b0386 | proC | -0.7 | -2.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1686 | ydiI | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b3625 | rfaY | -0.7 | -2.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1567 | intK | -0.7 | -1.6 | Qin prophage; predicted protein (RefSeq) | compare |
| b0706 | ybfD | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b4593 | ymgI | -0.7 | -0.8 | hypothetical protein (RefSeq) | compare |
| b2281 | nuoI | -0.7 | -1.1 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3493 | pitA | -0.7 | -3.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b3806 | cyaA | -0.7 | -2.9 | adenylate cyclase (NCBI) | compare |
| b3387 | dam | -0.7 | -4.9 | DNA adenine methylase (NCBI) | compare |
| b3229 | sspA | -0.7 | -1.8 | stringent starvation protein A (NCBI) | compare |
| b0763 | modA | -0.7 | -2.7 | molybdate transporter subunit (NCBI) | compare |
| b1618 | uidR | -0.7 | -1.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0739 | tolA | -0.6 | -1.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0437 | clpP | -0.6 | -2.5 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1108 | ycfP | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | -0.6 | -1.9 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2285 | nuoE | -0.6 | -1.1 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0802 | ybiJ | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b4676 | yoaK | -0.6 | -0.3 | expressed protein (RefSeq) | compare |
| b4613 | dinQ | -0.6 | -1.3 | Damage inducible, function unknown (RefSeq) | compare |
| b1121 | ycfZ | -0.6 | -1.1 | predicted inner membrane protein (NCBI) | compare |
| b4375 | prfC | -0.6 | -2.7 | peptide chain release factor 3 (NCBI) | compare |
| b1514 | lsrC | -0.6 | -1.1 | AI2 transporter (NCBI) | compare |
| b3026 | qseC | -0.6 | -1.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2666 | yqaE | -0.6 | -2.5 | predicted membrane protein (NCBI) | compare |
| b3781 | trxA | -0.6 | -2.6 | thioredoxin 1 (VIMSS) | compare |
| b1242 | ychE | -0.6 | -3.0 | predicted inner membrane protein (NCBI) | compare |
| b1855 | lpxM | -0.6 | -2.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2105 | yohL | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b2450 | yffS | -0.6 | -0.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1040 | csgD | -0.6 | -0.9 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b3181 | greA | -0.6 | -2.7 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2820 | recB | -0.6 | -0.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0737 | tolQ | -0.6 | -1.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0791 | ybhQ | -0.6 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b3621 | rfaC | -0.6 | -2.5 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1482 | osmC | -0.6 | -0.9 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1074 | flgC | -0.6 | -1.5 | flagellar basal-body rod protein C (NCBI) | compare |
| b0251 | yafY | -0.6 | -1.4 | CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2330 | yfcB | -0.6 | -1.1 | putative adenine-specific methylase (VIMSS) | compare |
| b3649 | rpoZ | -0.6 | -2.0 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0357 | yaiN | -0.6 | -1.4 | putative alpha helix chain (VIMSS) | compare |
| b0082 | mraW | -0.6 | -1.3 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0412 | yajI | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1253 | yciA | -0.6 | -1.5 | predicted hydrolase (NCBI) | compare |
| b1739 | osmE | -0.6 | -1.2 | DNA-binding transcriptional activator (NCBI) | compare |
| b2007 | yeeX | -0.6 | -1.5 | conserved protein (RefSeq) | compare |
| b3210 | arcB | -0.6 | -3.5 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b1438 | ydcQ | -0.6 | -1.5 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2804 | fucU | -0.6 | -1.9 | L-fucose mutarotase (NCBI) | compare |
| b2897 | ygfY | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b1165 | ymgA | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b2565 | recO | -0.6 | -2.4 | DNA repair protein RecO (NCBI) | compare |
| b2288 | nuoA | -0.6 | -1.4 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0088 | murD | -0.6 | -1.3 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b4506 | ykgO | -0.6 | -1.8 | rpmJ (L36) paralog (NCBI) | compare |
| b1566 | flxA | -0.6 | -1.5 | Qin prophage; predicted protein (NCBI) | compare |
| b1088 | yceD | -0.5 | -1.6 | hypothetical protein (NCBI) | compare |
| b0548 | ninE | -0.5 | -1.4 | DLP12 prophage; conserved protein (NCBI) | compare |
| b1084 | rne | -0.5 | -2.2 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b4546 | ypeB | -0.5 | -0.8 | hypothetical protein (NCBI) | compare |
| b4557 | yidD | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b1613 | manA | -0.5 | -1.1 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3169 | nusA | -0.5 | -0.7 | transcription elongation factor NusA (NCBI) | compare |
| b3623 | rfaK | -0.5 | -1.2 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b3404 | envZ | -0.5 | -3.4 | osmolarity sensor protein (NCBI) | compare |
| b1679 | sufE | -0.5 | -2.0 | cysteine desufuration protein SufE (NCBI) | compare |
| b3484 | yhhI | -0.5 | -1.7 | predicted transposase (NCBI) | compare |
| b1920 | fliY | -0.5 | -1.4 | cystine transporter subunit (NCBI) | compare |
| b0611 | rna | -0.5 | -2.2 | ribonuclease I (NCBI) | compare |
| b2113 | mrp | -0.5 | -2.0 | putative ATPase (VIMSS) | compare |
| b2286 | nuoC | -0.5 | -2.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1548 | nohA | -0.5 | -1.1 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b2822 | recC | -0.5 | -2.1 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0822 | ybiV | -0.5 | -2.3 | predicted hydrolase (NCBI) | compare |
| b1307 | pspD | -0.5 | -1.1 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b2824 | ygdB | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4177 | purA | -0.5 | -0.3 | adenylosuccinate synthetase (NCBI) | compare |
| b1518 | lsrG | -0.5 | -1.2 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b2698 | recX | -0.5 | -1.5 | RecA regulator RecX (NCBI) | compare |
| b2393 | nupC | -0.5 | -2.6 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b0051 | ksgA | -0.5 | -1.7 | dimethyladenosine transferase (NCBI) | compare |
| b3609 | secB | -0.5 | -1.1 | export protein SecB (NCBI) | compare |
| b1709 | btuD | -0.5 | -0.5 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2280 | nuoJ | -0.5 | -1.6 | NADH dehydrogenase subunit J (NCBI) | compare |
| b1103 | ycfF | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1693 | aroD | -0.5 | -2.1 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1366 | ydaY | -0.5 | -2.2 | Rac prophage; predicted protein (RefSeq) | compare |
| b0219 | yafV | -0.5 | -1.8 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b0928 | aspC | -0.5 | -2.5 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b1461 | ydcE | -0.5 | -1.5 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b1041 | csgB | -0.5 | -2.0 | curlin nucleator protein, minor subunit in curli complex (NCBI) | compare |
| b0125 | hpt | -0.5 | -2.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b1358 | ydaT | -0.5 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b1235 | rssB | -0.5 | -2.4 | response regulator of RpoS (NCBI) | compare |
| b1387 | maoC | -0.5 | -2.4 | fused aldehyde dehydrogenase/enoyl-CoA hydratase (NCBI) | compare |