| | gene | name | fitness | t score | description | |
|---|
| b2288 | nuoA | -2.7 | -3.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0726 | sucA | -2.5 | -5.8 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2287 | nuoB | -2.4 | -3.6 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2281 | nuoI | -2.4 | -3.9 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2280 | nuoJ | -2.4 | -4.9 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2276 | nuoN | -2.3 | -6.1 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3500 | gor | -2.3 | -1.5 | glutathione reductase (NCBI) | compare |
| b3052 | rfaE | -2.0 | -3.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1480 | sra | -2.0 | -2.1 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b2286 | nuoC | -2.0 | -6.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2283 | nuoG | -2.0 | -6.8 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2278 | nuoL | -2.0 | -8.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1613 | manA | -1.9 | -2.2 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2284 | nuoF | -1.9 | -5.1 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0630 | lipB | -1.9 | -1.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4603 | rseX | -1.9 | -1.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2285 | nuoE | -1.8 | -2.6 | NADH dehydrogenase subunit E (NCBI) | compare |
| b4171 | miaA | -1.8 | -3.1 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0080 | fruR | -1.8 | -5.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1346 | ydaQ | -1.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3842 | rfaH | -1.7 | -5.4 | transcriptional activator RfaH (NCBI) | compare |
| b4676 | yoaK | -1.7 | -0.9 | expressed protein (RefSeq) | compare |
| b4593 | ymgI | -1.7 | -1.1 | hypothetical protein (RefSeq) | compare |
| b0721 | sdhC | -1.7 | -3.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3443 | yrhA | -1.6 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2277 | nuoM | -1.6 | -4.7 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0437 | clpP | -1.6 | -4.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2498 | upp | -1.6 | -2.8 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3620 | rfaF | -1.6 | -3.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0018 | mokC | -1.5 | -1.5 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b0617 | citD | -1.5 | -2.1 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b1724 | ydiZ | -1.5 | -2.9 | hypothetical protein (NCBI) | compare |
| b4414 | tff | -1.5 | -3.4 | unknown RNA (NCBI) | compare |
| b2906 | visC | -1.5 | -4.9 | hypothetical protein (NCBI) | compare |
| b0439 | lon | -1.4 | -3.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0738 | tolR | -1.4 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3631 | rfaG | -1.4 | -8.9 | glucosyltransferase I (NCBI) | compare |
| b0623 | cspE | -1.4 | -2.3 | cold shock protein E (NCBI) | compare |
| b1161 | ycgX | -1.4 | -0.9 | hypothetical protein (NCBI) | compare |
| b1084 | rne | -1.4 | -4.3 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b4701 | sokX | -1.4 | -1.0 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4493 | gapC | -1.3 | -3.9 | no description | compare |
| b1332 | ynaJ | -1.3 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b3236 | mdh | -1.3 | -6.5 | malate dehydrogenase (NCBI) | compare |
| b3621 | rfaC | -1.3 | -3.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1236 | galU | -1.3 | -2.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0724 | sdhB | -1.3 | -4.9 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b4232 | fbp | -1.3 | -7.5 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b4005 | purD | -1.3 | -6.1 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b0523 | purE | -1.3 | -2.7 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b3204 | ptsN | -1.2 | -2.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3844 | fre | -1.2 | -4.6 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2476 | purC | -1.2 | -2.9 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b2947 | gshB | -1.2 | -3.0 | glutathione synthetase (NCBI) | compare |
| b1109 | ndh | -1.2 | -3.0 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2846 | yqeH | -1.2 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1217 | chaB | -1.2 | -1.7 | cation transport regulator (NCBI) | compare |
| b1231 | tyrT | -1.2 | -1.1 | tRNA-Tyr (NCBI) | compare |
| b4191 | ulaR | -1.2 | -3.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0723 | sdhA | -1.2 | -6.7 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0928 | aspC | -1.2 | -4.2 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b1291 | sapD | -1.1 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1183 | umuD | -1.1 | -2.3 | DNA polymerase V, subunit D (NCBI) | compare |
| b3860 | dsbA | -1.1 | -4.9 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b2499 | purM | -1.1 | -3.0 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b2279 | nuoK | -1.1 | -1.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2830 | nudH | -1.1 | -0.7 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3183 | obgE | -1.1 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2897 | ygfY | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b1949 | fliQ | -1.1 | -1.7 | flagellar biosynthesis protein Q (NCBI) | compare |
| b2318 | truA | -1.1 | -2.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1334 | fnr | -1.1 | -2.2 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b3627 | rfaI | -1.1 | -5.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b4406 | yaeP | -1.1 | -2.5 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -1.1 | -3.4 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0722 | sdhD | -1.1 | -4.2 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b4178 | yjeB | -1.0 | -2.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2312 | purF | -1.0 | -4.6 | amidophosphoribosyltransferase (NCBI) | compare |
| b4139 | aspA | -1.0 | -6.0 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3169 | nusA | -1.0 | -1.5 | transcription elongation factor NusA (NCBI) | compare |
| b3728 | pstS | -1.0 | -1.4 | phosphate transporter subunit (NCBI) | compare |
| b2569 | lepA | -1.0 | -2.2 | GTP-binding protein LepA (NCBI) | compare |
| b1777 | b1777 | -1.0 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3962 | udhA | -1.0 | -4.3 | putative oxidoreductase (VIMSS) | compare |
| b1733 | chbG | -1.0 | -2.7 | hypothetical protein (NCBI) | compare |
| b0720 | gltA | -1.0 | -3.9 | citrate synthase (NCBI) | compare |
| b1709 | btuD | -1.0 | -1.0 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2557 | purL | -1.0 | -5.9 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b0564 | appY | -1.0 | -0.6 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b4006 | purH | -1.0 | -5.6 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b1185 | dsbB | -0.9 | -1.9 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1551 | b1551 | -0.9 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1855 | lpxM | -0.9 | -1.8 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1505 | ydeT | -0.9 | -0.9 | hypothetical protein (RefSeq) | compare |
| b0881 | clpS | -0.9 | -1.6 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b2699 | recA | -0.9 | -0.6 | recombinase A (NCBI) | compare |
| b4613 | dinQ | -0.9 | -1.6 | Damage inducible, function unknown (RefSeq) | compare |
| b1129 | phoQ | -0.9 | -0.6 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b2831 | mutH | -0.9 | -3.1 | DNA mismatch repair protein (NCBI) | compare |
| b3778 | rep | -0.9 | -4.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2343 | b2343 | -0.9 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0806 | ybiM | -0.9 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3237 | argR | -0.9 | -2.4 | arginine repressor (NCBI) | compare |
| b1536 | ydeI | -0.9 | -0.5 | hypothetical protein (NCBI) | compare |
| b3082 | ygjM | -0.8 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4045 | yjbJ | -0.8 | -2.0 | predicted stress response protein (NCBI) | compare |
| b1550 | b1550 | -0.8 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0222 | lpcA | -0.8 | -1.0 | phosphoheptose isomerase (NCBI) | compare |
| b4179 | vacB | -0.8 | -3.1 | putative enzyme (VIMSS) | compare |
| b3636 | rpmG | -0.8 | -0.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b1497 | b1497 | -0.8 | -0.5 | putative enzyme (VIMSS) | compare |
| b1823 | cspC | -0.8 | -1.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b4594 | ymgJ | -0.8 | -1.8 | hypothetical protein (RefSeq) | compare |
| b2061 | wzb | -0.8 | -1.5 | protein-tyrosine phosphatase (NCBI) | compare |
| b2477 | nlpB | -0.8 | -2.3 | lipoprotein-34 (VIMSS) | compare |
| b3834 | yigP | -0.8 | -3.6 | hypothetical protein (NCBI) | compare |
| b1861 | ruvA | -0.8 | -0.5 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0504 | ybbS | -0.8 | -2.6 | DNA-binding transcriptional activator of the allD operon (NCBI) | compare |
| b3601 | mtlR | -0.8 | -3.3 | DNA-binding repressor (NCBI) | compare |
| b3281 | aroE | -0.8 | -5.4 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3649 | rpoZ | -0.8 | -1.6 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0049 | apaH | -0.8 | -1.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b0368 | tauD | -0.8 | -2.0 | taurine dioxygenase (NCBI) | compare |
| b1412 | azoR | -0.8 | -1.8 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1130 | phoP | -0.8 | -0.8 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b1796 | yoaG | -0.8 | -2.1 | hypothetical protein (NCBI) | compare |
| b2009 | sbmC | -0.7 | -2.4 | DNA gyrase inhibitor (NCBI) | compare |
| b0225 | yafQ | -0.7 | -2.5 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1563 | relE | -0.7 | -1.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b3849 | trkH | -0.7 | -4.4 | potassium transporter (NCBI) | compare |
| b0145 | dksA | -0.7 | -1.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4515 | ybgT | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b4378 | yjjV | -0.7 | -3.9 | predicted DNase (NCBI) | compare |
| b2895 | fldB | -0.7 | -1.2 | flavodoxin 2 (NCBI) | compare |
| b2951 | yggS | -0.7 | -3.2 | predicted enzyme (NCBI) | compare |
| b0866 | ybjQ | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b0791 | ybhQ | -0.7 | -2.8 | predicted inner membrane protein (NCBI) | compare |
| b4416 | rybA | -0.7 | -1.1 | unknown RNA (NCBI) | compare |
| b1348 | lar | -0.7 | -1.3 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1677 | lpp | -0.7 | -1.0 | murein lipoprotein (NCBI) | compare |
| b1762 | b1762 | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4201 | priB | -0.7 | -1.5 | primosomal replication protein N (NCBI) | compare |
| b3616 | tdh | -0.7 | -3.0 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b0729 | sucD | -0.7 | -1.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3806 | cyaA | -0.7 | -2.6 | adenylate cyclase (NCBI) | compare |
| b0303 | ykgI | -0.7 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -0.7 | -2.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2939 | yqgB | -0.7 | -0.9 | predicted protein (RefSeq) | compare |
| b1658 | purR | -0.7 | -2.3 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1591 | b1591 | -0.7 | -1.1 | putative oxidoreductase component (VIMSS) | compare |
| b4532 | yncN | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1865 | nudB | -0.7 | -1.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b4418 | sraB | -0.7 | -1.4 | unknown RNA (NCBI) | compare |
| b0428 | cyoE | -0.7 | -3.5 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1693 | aroD | -0.7 | -2.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1518 | lsrG | -0.7 | -1.0 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b0888 | trxB | -0.7 | -2.0 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2528 | iscA | -0.7 | -1.1 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1351 | racC | -0.7 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b1007 | b1007 | -0.6 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1533 | ydeD | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0826 | moeB | -0.6 | -2.0 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b3870 | glnA | -0.6 | -1.7 | glutamine synthetase (NCBI) | compare |
| b0438 | clpX | -0.6 | -2.4 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1506 | yneL | -0.6 | -0.8 | predicted transcriptional regulator (NCBI) | compare |
| b1286 | rnb | -0.6 | -1.2 | exoribonuclease II (NCBI) | compare |
| b4415 | hokE | -0.6 | -3.2 | toxic polypeptide, small (NCBI) | compare |
| b0088 | murD | -0.6 | -0.7 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1090 | plsX | -0.6 | -2.1 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b2754 | ygbF | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1772 | b1772 | -0.6 | -2.4 | putative kinase (VIMSS) | compare |
| b0053 | surA | -0.6 | -0.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0890 | ftsK | -0.6 | -1.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3180 | yhbY | -0.6 | -2.5 | predicted RNA-binding protein (NCBI) | compare |
| b1804 | rnd | -0.6 | -2.5 | ribonuclease D (NCBI) | compare |
| b1124 | potC | -0.6 | -2.8 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1739 | osmE | -0.6 | -1.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b2017 | yefM | -0.6 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1942 | fliJ | -0.6 | -0.8 | flagellar biosynthesis chaperone (NCBI) | compare |
| b2564 | pdxJ | -0.6 | -2.7 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b1290 | sapF | -0.6 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3619 | rfaD | -0.6 | -1.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0143 | pcnB | -0.6 | -2.3 | poly(A) polymerase I (VIMSS) | compare |
| b4402 | yjjY | -0.6 | -0.5 | hypothetical protein (NCBI) | compare |
| b0346 | mhpR | -0.6 | -1.5 | DNA-binding transcriptional activator, 3HPP-binding (RefSeq) | compare |
| b2433 | b2433 | -0.6 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1726 | yniB | -0.6 | -1.4 | predicted inner membrane protein (NCBI) | compare |
| b3164 | pnp | -0.6 | -0.9 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1235 | rssB | -0.6 | -2.5 | response regulator of RpoS (NCBI) | compare |
| b1657 | ydhP | -0.6 | -2.6 | predicted transporter (NCBI) | compare |
| b1989 | asnV | -0.6 | -1.4 | tRNA-Asn (NCBI) | compare |
| b1258 | yciF | -0.6 | -0.6 | hypothetical protein (NCBI) | compare |
| b4144 | yjeI | -0.6 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1499 | ydeO | -0.6 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b3389 | aroB | -0.6 | -3.0 | 3-dehydroquinate synthase (NCBI) | compare |
| b0212 | gloB | -0.6 | -1.0 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b4194 | ulaB | -0.6 | -1.8 | L-ascorbate-specific enzyme IIB component of PTS (NCBI) | compare |
| b3916 | pfkA | -0.6 | -0.4 | 6-phosphofructokinase (NCBI) | compare |
| b4454 | rdlD | -0.6 | -1.8 | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR-D repeat, with toxic peptide LdrD (RefSeq) | compare |
| b1394 | paaG | -0.6 | -2.3 | enoyl-CoA hydratase (NCBI) | compare |