Experiment set7S284 for Escherichia coli BL21

Compare to:

Laval1267

200 most detrimental genes:

  gene name fitness t score description  
ECD_00326 +1.4 2.1 DUF2755 family inner membrane protein compare
ECD_00329 +1.4 2.0 anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein compare
ECD_01565 +1.2 2.7 putative arabinose efflux transporter compare
ECD_00438 +1.2 1.4 copper-responsive regulon transcriptional regulator compare
ECD_02951 +1.1 1.9 antitoxinof the HigB-HigA toxin-antitoxin system compare
ECD_01529 +1.1 2.3 Qin prophage; uncharacterized protein compare
ECD_01053 +1.1 1.9 putative cytochrome b561 compare
ECD_01906 +1.0 1.8 hypothetical protein compare
ECD_01241 +1.0 1.8 putative RNA binding protein compare
ECD_00500 +1.0 1.8 DLP12 prophage; endonuclease RUS compare
ECD_01498 +1.0 1.6 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase compare
ECD_01561 +0.9 1.0 H(+)/Cl(-) exchange transporter compare
ECD_02238 +0.9 1.9 colicin V production protein compare
ECD_01472 +0.9 1.7 autoinducer 2 import system permease protein compare
ECD_01739 +0.9 3.2 putative DNA-binding transcriptional regulator compare
ECD_01396 +0.9 1.5 putative DNA-binding transcriptional regulator and putative aminotransferase compare
ECD_00752 +0.9 1.7 molybdopterin synthase, large subunit compare
ECD_03687 +0.9 1.4 site-specific tyrosine recombinase compare
ECD_01898 +0.9 1.9 nitrogen assimilation regulon transcriptional regulator; autorepressor compare
ECD_02155 +0.9 2.3 DUF1175 family protein, putative host defense protein compare
ECD_00941 +0.9 1.7 NAD(P)H-dependent FMN reductase compare
ECD_02920 +0.8 2.3 DUF1449 family inner membrane protein compare
ECD_03660 +0.8 1.8 rho operon leader peptide compare
ECD_03960 +0.8 3.4 D-allose ABC transporter periplasmic binding protein compare
ECD_01793 +0.8 2.2 stress protein, member of the CspA-family compare
ECD_00938 +0.8 2.1 aliphatic sulfonate ABC transporter permease compare
ECD_01426 +0.8 2.5 nitrate reductase 2 (NRZ), alpha subunit compare
ECD_00758 +0.8 2.0 inner membrane protein compare
ECD_00533 +0.8 2.1 copper/silver efflux system, outer membrane component compare
ECD_01279 +0.7 2.1 4-aminobutyrate aminotransferase, PLP-dependent compare
ECD_00961 +0.7 4.8 outer membrane protein A (3a compare
ECD_01900 +0.7 2.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ECD_03752 +0.7 4.9 coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent compare
ECD_01625 +0.7 1.8 murein DD-endopeptidase, space-maker hydrolase compare
ECD_02710 +0.7 1.7 CTP:molybdopterin cytidylyltransferase compare
ECD_00257 +0.7 2.2 putative DNA-binding transcriptional regulator compare
ECD_01310 +0.7 1.2 stress-induced protein compare
ECD_02104 +0.7 1.6 lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase compare
ECD_02093 +0.7 1.4 putative nucleoside transporter compare
ECD_01305 +0.7 2.0 S9-like protein non-peptidase family protein compare
ECD_01786 +0.7 2.2 putative membrane protein/conserved protein compare
ECD_00539 +0.7 3.0 dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive compare
ECD_00492 +0.7 1.1 hypothetical protein compare
ECD_00848 +0.7 1.3 bacteriophage tail fiber protein compare
ECD_02529 +0.6 1.6 hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein compare
ECD_01694 +0.6 1.5 fructosamine kinase family protein compare
ECD_01427 +0.6 1.5 nitrate/nitrite transporter compare
ECD_02915 +0.6 1.2 putative fimbrial-like adhesin protein compare
ECD_03407 +0.6 1.7 toxic polypeptide, small compare
ECD_00930 +0.6 1.4 M15A protease-related family periplasmic protein compare
ECD_01101 +0.6 1.3 OM lipoprotein stimulator of MrcB transpeptidase compare
ECD_00480 +0.6 1.6 FimA-like protein compare
ECD_02056 +0.6 1.8 transcriptional activator of csgD and csgBA compare
ECD_01230 +0.6 0.7 outer membrane protein W compare
ECD_00554 +0.6 1.4 regulator of length of O-antigen component of lipopolysaccharide chains compare
ECD_01700 +0.6 1.1 cell division modulator compare
ECD_02254 +0.6 1.0 chorismate synthase compare
ECD_01841 +0.6 1.3 carboxy-SAM synthase compare
ECD_02392 +0.6 2.6 phosphoribosylglycinamide formyltransferase 1 compare
ECD_01058 +0.6 1.1 dihydro-orotase compare
ECD_01864 +0.6 1.5 universal stress protein compare
ECD_04308 +0.6 1.6 uncharacterized protein compare
ECD_04024 +0.6 1.0 fumarate reductase (anaerobic), membrane anchor subunit compare
ECD_03451 +0.6 1.1 TPR-like repeat protein compare
ECD_02284 +0.6 1.3 formyl-CoA transferase, NAD(P)-binding compare
ECD_03242 +0.6 0.8 shikimate kinase I compare
ECD_03122 +0.6 1.8 acrAB operon transcriptional repressor compare
ECD_04052 +0.6 2.1 DUF1190 family protein compare
ECD_01248 +0.6 1.7 inner membrane protein, S49 peptidase family protein compare
ECD_01557 +0.5 1.7 S- and N-oxide reductase, A subunit, periplasmic compare
ECD_02103 +0.5 1.0 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein compare
ECD_00215 +0.5 3.4 inhibitor of c-type lysozyme, periplasmic compare
ECD_00626 +0.5 2.1 putative ion transport compare
ECD_00296 +0.5 1.8 thiogalactoside acetyltransferase compare
ECD_04213 +0.5 2.0 toxic peptide regulated by antisense sRNA symR compare
ECD_02258 +0.5 0.8 putative fimbrial-like adhesin protein compare
ECD_02061 +0.5 1.5 putative ABC transporter periplasmic binding protein compare
ECD_02592 +0.5 4.3 activator of AmiC murein hydrolase activity, lipoprotein compare
ECD_01860 +0.5 1.8 protein that enables flagellar motor rotation compare
ECD_01368 +0.5 1.5 putative ATP-dependent helicase compare
ECD_00670 +0.5 1.6 NIF3 family metal-binding protein compare
ECD_01887 +0.5 1.1 inner membrane heme subunit for periplasmic YedYZ reductase compare
ECD_01571 +0.5 1.3 pyridine nucleotide transhydrogenase, beta subunit compare
ECD_02384 +0.5 1.2 putative formate transporter compare
ECD_01535 +0.5 1.0 hypothetical protein compare
ECD_02305 +0.5 1.2 DUF1323 family putative DNA-binding protein compare
ECD_03867 +0.5 1.6 thiamine biosynthesis ThiGH complex subunit compare
ECD_01982 +0.5 1.5 putative citrate/iron-citrate/zinc-citrate efflux transporter compare
ECD_02300 +0.5 1.7 DUF2502 family putative periplasmic protein compare
ECD_00318 +0.5 2.3 taurine dioxygenase, 2-oxoglutarate-dependent compare
ECD_00271 +0.5 1.4 c-di-GMP-specific phosphodiesterase compare
ECD_02618 +0.5 1.5 putative SDR family oxidoreductase compare
ECD_00801 +0.5 1.2 putative membrane-anchored diguanylate cyclase compare
ECD_00671 +0.5 1.9 putative allophanate hydrolase, subunit 1 compare
ECD_02140 +0.5 1.0 fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase compare
ECD_02901 +0.5 1.4 quinol monooxygenase compare
ECD_03356 +0.5 1.7 putative Mg(2+) transport ATPase, inner membrane protein compare
ECD_01452 +0.5 1.0 putative periplasmic M16 family zinc metalloendopeptidase compare
ECD_01693 +0.5 0.9 uncharacterized protein compare
ECD_01912 +0.5 1.3 DNA gyrase inhibitor compare
ECD_02136 +0.5 1.5 ecotin, a serine protease inhibitor compare
ECD_00399 +0.5 1.0 putative DNA-binding transcriptional regulator compare
ECD_01138 +0.4 1.1 anti-repressor for YcgE, blue light-responsive; FAD-binding; inactive c-di-GMP phosphodiesterase-like EAL domain protein compare
ECD_01049 +0.4 1.0 putative drug efflux system protein compare
ECD_00779 +0.4 1.5 Fe-binding and storage protein; stress-inducible DNA-binding protein compare
ECD_03898 +0.4 1.5 extracellular polysaccharide production threonine-rich protein compare
ECD_00026 +0.4 1.8 hypothetical protein compare
ECD_02189 +0.4 1.1 dihydroxynaphthoic acid synthetase compare
ECD_02261 +0.4 1.4 putative periplasmic pilin chaperone compare
ECD_02278 +0.4 1.3 multidrug resistance efflux pump membrane fusion protein compare
ECD_02088 +0.4 1.6 endonuclease IV with intrinsic 3'-5' exonuclease activity compare
ECD_01319 +0.4 1.5 putative Zn(II) transporter compare
ECD_01873 +0.4 1.3 ferritin iron storage protein (cytoplasmic) compare
ECD_03895 +0.4 2.0 DUF3811 family protein compare
ECD_00843 +0.4 1.1 phage baseplate assembly protein compare
ECD_02114 +0.4 1.5 putative ATP-dependent DNA or RNA helicase compare
ECD_00150 +0.4 1.2 iron(3+)-hydroxamate import ABC transporter ATPase compare
ECD_04173 +0.4 2.3 GNAT family putative N-acetyltransferase compare
ECD_01760 +0.4 1.2 putative MFS transporter, inner membrane protein compare
ECD_03141 +0.4 1.8 mechanosensitive channel protein, high conductance compare
ECD_01746 +0.4 1.4 DUF1315 family protein compare
ECD_01301 +0.4 0.9 lipid hydroperoxide peroxidase compare
ECD_04119 +0.4 0.6 SopA-central-domain-like hexapeptide repeat protein compare
ECD_00910 +0.4 2.3 UPF0702 family putative inner membrane protein compare
ECD_02035 +0.4 1.5 hypothetical protein compare
ECD_00806 +0.4 1.9 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a compare
ECD_00986 +0.4 1.3 putative O-antigen capsule outer membrane auxillary protein export channel compare
ECD_00420 +0.4 0.7 adenine phosphoribosyltransferase compare
ECD_00838 +0.4 1.1 putative phage tail protein compare
ECD_01772 +0.4 1.5 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster compare
ECD_01293 +0.4 1.7 putative family 65 glycosyl hydrolase compare
ECD_01110 +0.4 1.8 transcription-repair coupling factor compare
ECD_03068 +0.4 2.1 ribosome hibernation promoting factor HPF; stabilizes 100S dimers compare
ECD_01317 +0.4 1.3 DNA endonuclease compare
ECD_02528 +0.4 2.1 putative membrane-anchored DUF883 family ribosome-binding protein compare
ECD_00844 +0.4 1.6 putative phage tail protein compare
ECD_04269 +0.4 1.0 transcriptional repressor, tryptophan-binding compare
ECD_04252 +0.4 1.5 uncharacterized protein compare
ECD_00803 +0.4 0.9 repressor of biofilm formation by indole transport regulation compare
ECD_03591 +0.4 1.1 tryptophanase leader peptide compare
ECD_00378 +0.4 0.6 hypothetical protein compare
ECD_02591 +0.4 3.4 RNA polymerase, sigma S (sigma 38) factor compare
ECD_01290 +0.4 1.1 putative Zn-dependent NAD(P)-binding oxidoreductase compare
ECD_00742 +0.4 1.4 biotin synthase compare
ECD_01957 +0.4 0.7 GDP-mannose mannosyl hydrolase compare
ECD_00334 +0.4 1.8 UPF0178 family protein compare
ECD_01970 +0.4 1.5 suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein compare
ECD_00162 +0.4 1.3 UPF0325 family protein compare
ECD_01814 +0.4 0.8 C-N hydrolase family protein compare
ECD_02918 +0.4 1.0 fimbrial protein compare
ECD_02048 +0.4 1.2 putative hexameric AAA+ MoxR family ATPase compare
ECD_03798 +0.4 0.8 response regulator in two-component regulatory system with CpxA compare
ECD_02218 +0.4 1.3 sugar phosphatase compare
ECD_01031 +0.4 1.3 alkaline phosphatase compare
ECD_00429 +0.4 1.2 inner membrane putative NAD(P)-binding transporter compare
ECD_00295 +0.4 2.0 putative cyanate transporter compare
ECD_02429 +0.4 1.5 hca operon transcriptional regulator compare
ECD_02107 +0.4 1.3 microcin C ABC transporter periplasmic binding protein compare
ECD_00682 +0.4 0.9 succinate dehydrogenase, membrane subunit, binds cytochrome b556 compare
ECD_00841 +0.4 1.8 hypothetical protein compare
ECD_04150 +0.4 1.7 IS600 ORF1-like protein compare
ECD_01261 +0.4 1.2 global regulator of transcription; DeoR family compare
ECD_02091 +0.4 0.7 ribonucleoside hydrolase 2 compare
ECD_03729 +0.4 0.9 TatABCE protein translocation system subunit compare
ECD_00361 +0.4 1.4 Nrd regulon repressor compare
ECD_00273 +0.4 1.1 putative inner membrane protein compare
ECD_02762 +0.4 2.8 putative Zn-binding dehydrogenase compare
ECD_01562 +0.4 1.2 putative dethiobiotin synthetase compare
ECD_02322 +0.4 1.3 sulfate/thiosulfate transporter subunit compare
ECD_02623 +0.4 1.4 TPM domain protein, putative phosphatase compare
ECD_02887 +0.4 1.7 outer membrane lipoprotein, Lpp-like protein compare
ECD_01624 +0.4 1.0 glutaredoxin-4 compare
ECD_00513 +0.4 1.3 hypothetical protein compare
ECD_04061 +0.4 1.4 L-ascorbate-specific enzyme IIB component of PTS compare
ECD_02584 +0.4 0.9 serine/threonine-specific protein phosphatase 2 compare
ECD_00241 +0.4 2.1 putative transcriptional regulator compare
ECD_04249 +0.4 1.7 dUMP phosphatase compare
ECD_02825 +0.4 0.6 Pyrophosphorylase compare
ECD_02408 +0.4 1.7 MreB assembly cytoskeletal protein compare
ECD_01381 +0.4 1.5 OPG biosynthetic periplasmic protein compare
ECD_00020 +0.4 0.9 hypothetical protein compare
ECD_04147 +0.4 0.9 hypothetical protein compare
ECD_02576 +0.4 1.8 protein involved in nickel insertion into hydrogenases 3 compare
ECD_01081 +0.4 1.0 uncharacterized protein compare
ECD_01410 +0.4 1.2 L-asparagine transporter compare
ECD_01590 +0.4 1.9 maltose and glucose-specific PTS enzyme IIB component and IIC component compare
ECD_03972 +0.4 0.7 ribophosphonate triphosphate synthase subunit compare
ECD_00865 +0.4 1.1 arginine ABC transporter periplasmic binding protein compare
ECD_00433 +0.4 2.1 TraB family protein compare
ECD_00218 +0.4 1.7 type 2 glutamine amidotransferase family protein compare
ECD_00684 +0.4 1.1 succinate dehydrogenase, FeS subunit compare
ECD_02190 +0.4 1.1 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase compare
ECD_00317 +0.3 1.6 taurine ABC transporter permease compare
ECD_00674 +0.3 1.6 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase compare
ECD_00328 +0.3 2.0 D-alanine-D-alanine ligase A compare
ECD_01953 +0.3 0.9 colanic biosynthesis UDP-glucose lipid carrier transferase compare
ECD_03001 +0.3 0.6 putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine/galactosamine PTS system enzyme IIA component) compare
ECD_03453 +0.3 0.7 DUF3302 family inner membrane protein compare
ECD_01278 +0.3 1.2 gamma-glutamylputrescine oxidoreductase compare
ECD_03979 +0.3 1.7 zinc-ribbon family protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms