Experiment set7S214 for Escherichia coli BL21

Compare to:

EV152

200 most important genes:

  gene name fitness t score description  
ECD_04388 -5.7 -3.2 putative membrane-bound BasS regulator compare
ECD_01930 -5.6 -8.5 UDP-glucose 6-dehydrogenase compare
ECD_03983 -5.5 -11.2 sensory histidine kinase in two-component regulatory system with BasR compare
ECD_03984 -5.4 -9.8 response regulator in two-component regulatory system with BasS compare
ECD_03840 -5.1 -19.1 LPS heptose I phosphoethanolamine transferase compare
ECD_03985 -4.9 -16.4 lipid A phosphoethanolamine transferase compare
ECD_01489 -3.1 -2.1 transcriptional repressor of multiple antibiotic resistance compare
ECD_02179 -3.0 -10.5 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent compare
ECD_01162 -2.9 -1.9 fatty acid metabolism regulon transcriptional regulator compare
ECD_02181 -2.9 -13.0 fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase compare
ECD_00018 -2.9 -4.2 sodium-proton antiporter compare
ECD_03797 -2.8 -4.3 sensory histidine kinase in two-component regulatory system with CpxR compare
ECD_03036 -2.8 -2.7 transcription termination/antitermination L factor compare
ECD_02180 -2.8 -9.5 undecaprenyl phosphate-L-Ara4FN transferase compare
ECD_03119 -2.8 -1.9 global DNA-binding transcriptional dual regulator compare
ECD_02182 -2.7 -5.0 undecaprenyl phosphate-alpha-L-ara4FN deformylase compare
ECD_02242 -2.7 -4.1 DedA family inner membrane protein compare
ECD_02162 -2.6 -2.0 ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance compare
ECD_03473 -2.5 -12.5 LPS(HepIII)-glucuronic acid glycosyltransferase compare
ECD_04038 -2.4 -1.6 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase compare
ECD_02183 -2.3 -10.6 4-amino-4-deoxy-L-arabinose transferase compare
ECD_02738 -2.3 -1.5 2-octaprenylphenol hydroxylase, FAD-dependent compare
ECD_03046 -2.1 -4.0 transcript cleavage factor compare
ECD_02927 -2.1 -6.3 undecaprenyl pyrophosphate phosphatase compare
ECD_00487 -2.0 -3.3 Excisionase compare
ECD_02889 -2.0 -6.0 septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts) compare
ECD_03358 -1.9 -1.7 stress response protein acid-resistance protein compare
ECD_03671 -1.9 -3.5 TDP-Fuc4NAc:lipidIIFuc4NAc transferase compare
ECD_02186 -1.9 -5.6 inactive two-component system connector protein compare
ECD_01826 -1.8 -1.6 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase compare
ECD_03118 -1.8 -6.1 tRNA-dihydrouridine synthase B compare
ECD_03877 -1.7 -4.3 HU, DNA-binding transcriptional regulator, alpha subunit compare
ECD_01084 -1.7 -4.6 DUF177 family protein compare
ECD_00834 -1.7 -2.3 putative capsid scaffolding protein compare
ECD_00882 -1.6 -7.1 DUF535 family protein compare
ECD_01985 -1.6 -1.6 UPF0339 family protein compare
ECD_03132 -1.6 -2.5 dehydroshikimate reductase, NAD(P)-binding compare
ECD_02432 -1.6 -1.8 3-phenylpropionate dioxygenase, ferredoxin subunit compare
ECD_02659 -1.6 -7.6 glycine cleavage system transcriptional activator; autorepressor compare
ECD_03093 -1.5 -1.8 DUF1043 family inner membrane-anchored protein compare
ECD_03692 -1.5 -5.5 magnesium/nickel/cobalt transporter compare
ECD_02423 -1.5 -3.9 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor compare
ECD_00634 -1.4 -1.6 N-acetylglucosamine-6-phosphate deacetylase compare
ECD_02506 -1.4 -4.7 UPF0125 family protein compare
ECD_00950 -1.4 -2.0 FtsZ stabilizer compare
ECD_00098 -1.4 -2.2 regulator of secA translation compare
ECD_00142 -1.4 -3.6 poly(A) polymerase compare
ECD_02524 -1.4 -3.7 DUF2892 family inner membrane rhodanese compare
ECD_02331 -1.4 -2.8 porphyrinogen oxidase, cytoplasmic compare
ECD_03731 -1.3 -2.7 TatABCE protein translocation system subunit compare
ECD_00933 -1.3 -2.6 outer membrane porin 1a (Ia compare
ECD_00333 -1.3 -5.4 pyrroline-5-carboxylate reductase, NAD(P)-binding compare
ECD_02335 -1.3 -3.6 N-acetylmuramoyl-l-alanine amidase I compare
ECD_03669 -1.3 -3.9 TDP-4-oxo-6-deoxy-D-glucose transaminase compare
ECD_03241 -1.3 -4.8 3-dehydroquinate synthase compare
ECD_01773 -1.3 -1.9 putative YeaWX dioxygenase beta subunit, reductase component compare
ECD_03257 -1.3 -1.7 response regulator in two-component regulatory system with EnvZ compare
ECD_00831 -1.2 -2.4 retron EC86 RNA-directed DNA polymerase-like protein compare
ECD_03673 -1.2 -7.4 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
ECD_01664 -1.2 -1.4 putative acyl-CoA dehydrogenase compare
ECD_02226 -1.2 -2.6 glutathione S-transferase compare
ECD_00206 -1.2 -7.5 putative S-adenosyl-L-methionine-dependent methyltransferase compare
ECD_t00083 -1.2 -1.5 tRNA-Leu compare
ECD_03238 -1.2 -2.5 D-ribulose-5-phosphate 3-epimerase compare
ECD_01405 -1.2 -2.1 methionine N-acyltransferase; L-amino acid N-acyltransferase compare
ECD_02465 -1.2 -7.1 anti-sigma E factor, binds RseA compare
ECD_03274 -1.2 -5.1 DNA-binding transcriptional repressor compare
ECD_03240 -1.2 -8.0 cell division protein that binds to the septal ring compare
ECD_00061 -1.2 -10.1 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase compare
ECD_00124 -1.2 -3.4 hypoxanthine phosphoribosyltransferase compare
ECD_02535 -1.1 -8.8 glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein compare
ECD_02533 -1.1 -7.5 glycine betaine/proline ABC transporter periplasmic binding protein conserved
ECD_02523 -1.1 -4.9 tributyltin-inducible repressor of ygaVP compare
ECD_02534 -1.1 -8.3 glycine betaine/proline ABC transporter permease compare
ECD_00354 -1.1 -3.9 tRNA-guanine transglycosylase compare
ECD_02964 -1.1 -5.8 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter conserved
ECD_00574 -1.1 -4.2 alkyl hydroperoxide reductase, C22 subunit compare
ECD_02105 -1.1 -5.9 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase compare
ECD_02726 -1.1 -2.7 site-specific tyrosine recombinase compare
ECD_02484 -1.1 -4.6 23S rRNA pseudouridine(1911,1915,1917) synthase compare
ECD_00109 -1.1 -5.2 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase compare
ECD_01189 -1.1 -2.4 transglutaminase-like TPR-repeat protein compare
ECD_00081 -1.1 -3.1 transcriptional repressor-activator for carbon metabolism compare
ECD_00746 -1.0 -4.7 exision nuclease of nucleotide excision repair, DNA damage recognition component compare
ECD_00374 -1.0 -1.4 phage Phi6 host factor, ATP/GTP binding protein compare
ECD_01250 -1.0 -1.7 DNA topoisomerase I, omega subunit compare
ECD_00392 -1.0 -3.6 HU, DNA-binding transcriptional regulator, beta subunit compare
ECD_02440 -1.0 -3.0 putative sugar ABC transporter periplasmic binding protein compare
ECD_01118 -1.0 -2.2 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_03242 -1.0 -1.1 shikimate kinase I compare
ECD_02904 -1.0 -4.9 3',5' cAMP phosphodiesterase compare
ECD_03668 -1.0 -3.2 TDP-fucosamine acetyltransferase compare
ECD_03070 -1.0 -3.1 adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase compare
ECD_00896 -1.0 -2.7 recombination intermediate processing DNA-dependent ATPase compare
ECD_01582 -1.0 -1.2 mannose-6-phosphate isomerase compare
ECD_02064 -1.0 -2.9 D-alanyl-D-alanine endopeptidase compare
ECD_01681 -1.0 -1.1 integration host factor (IHF), DNA-binding protein, alpha subunit compare
ECD_00596 -1.0 -1.4 TatABCE protein translocation system subunit compare
ECD_01774 -1.0 -1.8 ribonuclease D compare
ECD_01946 -1.0 -1.4 dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit compare
ECD_02463 -0.9 -2.2 back-translocating elongation factor EF4, GTPase compare
ECD_03571 -0.9 -0.8 DUF1375 family outer membrane protein compare
ECD_01198 -0.9 -0.9 putative invasin compare
ECD_00807 -0.9 -1.2 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx compare
ECD_02286 -0.9 -1.1 putative lipoprotein involved in colanic acid biosynthesis compare
ECD_02127 -0.9 -2.4 heme export ABC transporter permease compare
ECD_02111 -0.9 -2.3 uncharacterized protein compare
ECD_02091 -0.9 -1.6 ribonucleoside hydrolase 2 compare
ECD_01620 -0.9 -2.1 chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme compare
ECD_03643 -0.9 -4.4 UPF0438 family protein compare
ECD_02882 -0.9 -4.5 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter compare
ECD_01695 -0.9 -1.4 putative inner membrane protein compare
ECD_02629 -0.9 -6.5 (p)ppGpp synthetase I/GTP pyrophosphokinase compare
ECD_02677 -0.9 -7.8 PEP-protein phosphotransferase enzyme I; GAF domain containing protein compare
ECD_02230 -0.9 -1.8 transposase_31 family protein compare
ECD_00342 -0.9 -2.9 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function compare
ECD_04024 -0.9 -1.2 fumarate reductase (anaerobic), membrane anchor subunit compare
ECD_02724 -0.9 -5.6 ssDNA exonuclease, 5 compare
ECD_00006 -0.9 -3.9 peroxide resistance protein, lowers intracellular iron compare
ECD_04048 -0.9 -1.9 DUF2170 family protein compare
ECD_02989 -0.9 -4.4 glycerate kinase I compare
ECD_00923 -0.9 -2.4 protein kinase-like domain protein compare
ECD_01167 -0.9 -1.4 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A compare
ECD_t00039 -0.9 -1.5 tRNA-Ala compare
ECD_00139 -0.9 -2.9 putative periplasmic pilin chaperone compare
ECD_03075 -0.9 -2.1 aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB compare
ECD_03817 -0.8 -1.8 peptidase component of the HslUV protease compare
ECD_03898 -0.8 -1.9 extracellular polysaccharide production threonine-rich protein compare
ECD_01827 -0.8 -3.2 murein DD-endopeptidase, space-maker hydrolase, septation protein compare
ECD_01947 -0.8 -2.3 dTDP-glucose 4,6 dehydratase, NAD(P)-binding compare
ECD_00862 -0.8 -2.0 putrescine ABC transporter permease compare
ECD_02946 -0.8 -1.8 evolved beta-D-galactosidase, beta subunit; cupin superfamily compare
ECD_01107 -0.8 -1.8 repressor for bhsA(ycfR) compare
ECD_02348 -0.8 -1.5 ethanolamine utilization protein, putative carboxysome structural protein compare
ECD_01795 -0.8 -2.8 putative inner membrane protein compare
ECD_01245 -0.8 -2.0 23S rRNA pseudouridine(2605) synthase compare
ECD_00367 -0.8 -2.4 2-carboxybenzaldehyde reductase compare
ECD_02539 -0.8 -4.9 transcriptional repressor of microcin B17 synthesis and multidrug efflux compare
ECD_03696 -0.8 -1.0 DUF2628 family putative inner membrane protein compare
ECD_01601 -0.8 -1.0 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex compare
ECD_03353 -0.8 -1.7 hypothetical protein compare
ECD_03756 -0.8 -4.7 GTP-binding protein compare
ECD_03016 -0.8 -3.4 DnaA initiator-associating factor for replication initiation compare
ECD_01188 -0.8 -1.5 SIRB family inner membrane protein compare
ECD_01979 -0.8 -1.6 multidrug efflux system, subunit A compare
ECD_00112 -0.8 -3.5 pyruvate dehydrogenase complex repressor; autorepressor compare
ECD_01706 -0.8 -1.6 N,N'-diacetylchitobiose-specific enzyme IIC component of PTS compare
ECD_03106 -0.8 -3.3 ribonuclease G compare
ECD_03801 -0.8 -4.1 6-phosphofructokinase I compare
ECD_01752 -0.8 -2.1 protein kinase, endogenous substrate unidentified; autokinase compare
ECD_00978 -0.8 -2.1 hydrogenase 1 maturation protease compare
ECD_03641 -0.8 -4.7 putative transcriptional regulator compare
ECD_01225 -0.8 -1.5 putative DGPF domain-containing enzyme compare
ECD_00830 -0.8 -2.0 hypothetical protein compare
ECD_03727 -0.7 -1.3 aerobic ubiquinone synthesis protein, SCP2 family protein compare
ECD_04373 -0.7 -1.9 UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system compare
ECD_02346 -0.7 -1.1 aldehyde oxidoreductase, ethanolamine utilization protein compare
ECD_t00059 -0.7 -1.1 tRNA-Thr compare
ECD_00802 -0.7 -1.5 ribosomal protein S12 methylthiotransferase compare
ECD_02923 -0.7 -5.8 fused deadenylyltransferase/adenylyltransferase for glutamine synthetase compare
ECD_03558 -0.7 -2.4 putative Cys-type oxidative YidJ-maturating enzyme compare
ECD_01755 -0.7 -1.2 putative diguanylate cyclase compare
ECD_02052 -0.7 -2.1 lipoprotein, DUF1307 family compare
ECD_02399 -0.7 -1.7 GMP synthetase (glutamine aminotransferase) compare
ECD_03249 -0.7 -2.1 adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase compare
ECD_01379 -0.7 -1.4 putative DNA-binding transcriptional regulator compare
ECD_02781 -0.7 -3.2 UPF0001 family protein, PLP-binding compare
ECD_01744 -0.7 -1.4 putative MFS sugar transporter, membrane protein compare
ECD_02076 -0.7 -0.9 dihydropyrimidine dehydrogenase, NADH-dependent, subunit C compare
ECD_02178 -0.7 -4.0 putative LPS core heptose(II)-phosphate phosphatase compare
ECD_03498 -0.7 -3.0 nucleoid occlusion factor, anti-FtsZ division inhibitor compare
ECD_03098 -0.7 -1.7 cadmium and peroxide resistance protein, stress-induced compare
ECD_02387 -0.7 -1.7 putative oxidoreductase compare
ECD_03131 -0.7 -1.8 DUF1488 family protein compare
ECD_03509 -0.7 -2.8 ATP-dependent DNA helicase compare
ECD_01181 -0.7 -1.7 C4-dicarboxylic acid transporter compare
ECD_02324 -0.7 -2.1 sulfate/thiosulfate ABC transporter permease compare
ECD_00420 -0.7 -0.9 adenine phosphoribosyltransferase compare
ECD_02852 -0.7 -3.4 hypothetical protein compare
ECD_02549 -0.7 -3.2 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor compare
ECD_04309 -0.7 -1.6 uncharacterized protein compare
ECD_01353 -0.7 -1.4 putative membrane-anchored protein, function unknown compare
ECD_00783 -0.7 -2.2 hypothetical protein compare
ECD_03436 -0.7 -2.0 putative regulatory protein compare
ECD_02667 -0.7 -3.8 exonuclease V (RecBCD complex), alpha chain compare
ECD_01802 -0.7 -3.2 RNA chaperone, putative ProP translation regulator compare
ECD_04042 -0.7 -1.7 HflB protease modulator specific for phage lambda cII repressor compare
ECD_03816 -0.7 -1.9 molecular chaperone and ATPase component of HslUV protease compare
ECD_04265 -0.7 -3.2 DNA repair protein compare
ECD_00384 -0.7 -4.2 muropeptide transporter compare
ECD_00130 -0.7 -2.4 aspartate 1-decarboxylase compare
ECD_00985 -0.7 -1.4 O-antigen capsule forming protein-tyrosine-phosphatase; Etk-P dephosphorylase compare
ECD_03658 -0.6 -5.2 ATP-dependent RNA helicase compare
ECD_01656 -0.6 -1.9 putative FAD-linked oxidoreductase compare
ECD_02255 -0.6 -2.4 N5-glutamine methyltransferase compare
ECD_03659 -0.6 -0.6 thioredoxin 1 compare
ECD_00765 -0.6 -1.2 DUF1768 family protein compare
ECD_02089 -0.6 -2.1 putative kinase compare
ECD_04077 -0.6 -2.7 putative transcriptional regulator compare
ECD_01218 -0.6 -1.6 oligopeptide ABC transporter permease compare


Specific Phenotypes

For 9 genes in this experiment

For phage MOI 10 in Escherichia coli BL21

For phage MOI 10 across organisms