Experiment set7S20 for Escherichia coli BL21

Compare to:

Laval1257

200 most important genes:

  gene name fitness t score description  
ECD_03308 -3.9 -2.5 PanD autocleavage accelerator, panothenate synthesis compare
ECD_00752 -3.6 -2.4 molybdopterin synthase, large subunit compare
ECD_01180 -3.5 -1.3 DUF2583 family putative inner membrane protein compare
ECD_01301 -3.1 -1.7 lipid hydroperoxide peroxidase compare
ECD_01593 -2.8 -1.8 putative oxidoreductase compare
ECD_01241 -2.7 -1.4 putative RNA binding protein compare
ECD_01629 -2.6 -1.4 transcriptional repressor, hypoxanthine-binding compare
ECD_01405 -2.4 -1.6 methionine N-acyltransferase; L-amino acid N-acyltransferase compare
ECD_02387 -2.4 -3.1 putative oxidoreductase compare
ECD_00681 -2.3 -1.2 succinate dehydrogenase, membrane subunit, binds cytochrome b556 compare
ECD_01250 -2.2 -1.1 DNA topoisomerase I, omega subunit compare
ECD_00455 -2.2 -2.1 ureidoglycolate lyase, releasing urea compare
ECD_03036 -2.1 -2.8 transcription termination/antitermination L factor compare
ECD_01577 -2.1 -1.5 response regulator of RstAB two-component system compare
ECD_03731 -2.1 -3.6 TatABCE protein translocation system subunit compare
ECD_02951 -2.0 -1.3 antitoxinof the HigB-HigA toxin-antitoxin system compare
ECD_03121 -2.0 -1.1 putative membrane protein compare
ECD_02738 -1.9 -1.3 2-octaprenylphenol hydroxylase, FAD-dependent compare
ECD_01667 -1.9 -1.7 putative electron transfer flavoprotein, FAD-binding subunit compare
ECD_04042 -1.9 -3.1 HflB protease modulator specific for phage lambda cII repressor compare
ECD_00986 -1.9 -2.6 putative O-antigen capsule outer membrane auxillary protein export channel compare
ECD_00380 -1.9 -1.2 cytochrome o ubiquinol oxidase subunit IV compare
ECD_01746 -1.8 -2.9 DUF1315 family protein compare
ECD_03093 -1.8 -1.9 DUF1043 family inner membrane-anchored protein compare
ECD_03729 -1.8 -1.7 TatABCE protein translocation system subunit compare
ECD_01049 -1.8 -2.6 putative drug efflux system protein compare
ECD_01168 -1.8 -1.2 lytic murein endotransglycosylase E compare
ECD_04193 -1.7 -1.3 fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor compare
ECD_02456 -1.7 -1.6 putative 4Fe-4S cluster-containing protein compare
ECD_02889 -1.7 -4.1 septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts) compare
ECD_02740 -1.7 -4.9 proline aminopeptidase P II compare
ECD_03256 -1.7 -4.4 sensory histidine kinase in two-component regulatory system with OmpR compare
ECD_01379 -1.6 -1.3 putative DNA-binding transcriptional regulator compare
ECD_03257 -1.6 -1.6 response regulator in two-component regulatory system with EnvZ compare
ECD_02459 -1.6 -1.7 gap repair protein compare
ECD_00559 -1.6 -1.8 ferrienterobactin ABC transporter periplasmic binding protein compare
ECD_01575 -1.6 -1.4 dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme compare
ECD_01655 -1.6 -1.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
ECD_00540 -1.6 -2.1 DUF419 family protein compare
ECD_03242 -1.6 -1.5 shikimate kinase I compare
ECD_00923 -1.6 -2.8 protein kinase-like domain protein compare
ECD_03425 -1.6 -1.6 putative hydrogenase, 4Fe-4S ferredoxin-type component compare
ECD_00896 -1.6 -2.8 recombination intermediate processing DNA-dependent ATPase compare
ECD_01248 -1.6 -2.0 inner membrane protein, S49 peptidase family protein compare
ECD_00112 -1.6 -5.2 pyruvate dehydrogenase complex repressor; autorepressor compare
ECD_01559 -1.5 -1.5 oxidoreductase, membrane subunit compare
ECD_01974 -1.5 -3.0 3-methyl-adenine DNA glycosylase II compare
ECD_01614 -1.5 -1.7 putative membrane fusion protein (MFP) of YdhJK efflux pump compare
ECD_01220 -1.5 -3.3 oligopeptide ABC transporter ATPase compare
ECD_02080 -1.5 -2.4 galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor compare
ECD_02384 -1.5 -1.9 putative formate transporter compare
ECD_00793 -1.5 -2.5 molybdopterin synthase sulfurylase compare
ECD_02042 -1.5 -1.0 DUF2574 family protein compare
ECD_01879 -1.5 -1.0 response regulator in two-component regulatory system with BarA compare
ECD_01787 -1.5 -1.8 fused mannose-specific PTS enzymes: IIA component/IIB component compare
ECD_04030 -1.5 -1.0 phosphatidylserine decarboxylase compare
ECD_01733 -1.5 -2.3 selenophosphate synthase compare
ECD_03785 -1.5 -1.7 putative enzyme IIA component of PTS compare
ECD_00675 -1.5 -4.4 regulator of aidB expression; inner membrane protein compare
ECD_02302 -1.4 -3.6 nucleoside (except guanosine) transporter compare
ECD_00960 -1.4 -1.5 Ter macrodomain organizer matS-binding protein compare
ECD_03818 -1.4 -2.0 essential cell division protein compare
ECD_01425 -1.4 -2.0 nitrate reductase 2 (NRZ), beta subunit compare
ECD_02038 -1.4 -1.0 hypothetical protein compare
ECD_01071 -1.3 -2.3 flagellar hook assembly protein compare
ECD_02331 -1.3 -1.8 porphyrinogen oxidase, cytoplasmic compare
ECD_02973 -1.3 -1.0 DUF805 family inner membrane protein compare
ECD_02313 -1.3 -3.8 sulfate transporter, sulfite inhibited compare
ECD_00329 -1.3 -0.9 anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein compare
ECD_03556 -1.3 -1.4 ilvB operon leader peptide compare
ECD_03498 -1.3 -5.0 nucleoid occlusion factor, anti-FtsZ division inhibitor compare
ECD_01966 -1.3 -2.4 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase compare
ECD_01317 -1.3 -2.2 DNA endonuclease compare
ECD_t00083 -1.3 -1.8 tRNA-Leu compare
ECD_03911 -1.3 -3.2 chorismate--pyruvate lyase compare
ECD_01478 -1.3 -1.6 altronate oxidoreductase, NAD-dependent compare
ECD_00765 -1.3 -1.0 DUF1768 family protein compare
ECD_00006 -1.3 -3.6 peroxide resistance protein, lowers intracellular iron compare
ECD_00073 -1.3 -2.3 3-isopropylmalate dehydratase small subunit compare
ECD_02024 -1.3 -1.9 D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit compare
ECD_01972 -1.3 -1.6 uridine/cytidine kinase compare
ECD_01066 -1.3 -2.3 export chaperone for FlgK and FlgL compare
ECD_02393 -1.3 -2.7 polyphosphate kinase, component of RNA degradosome compare
ECD_02408 -1.2 -3.3 MreB assembly cytoskeletal protein compare
ECD_00968 -1.2 -1.6 UPF0319 family protein compare
ECD_02904 -1.2 -3.8 3',5' cAMP phosphodiesterase compare
ECD_01625 -1.2 -1.1 murein DD-endopeptidase, space-maker hydrolase compare
ECD_01211 -1.2 -2.4 PcnB-degradosome interaction factor; response regulator compare
ECD_00634 -1.2 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
ECD_02728 -1.2 -5.0 toxin of CptAB toxin-antitoxin pair compare
ECD_02060 -1.2 -2.2 putative ABC transporter permease compare
ECD_02090 -1.2 -1.6 nucleoside permease compare
ECD_02901 -1.2 -1.7 quinol monooxygenase compare
ECD_00176 -1.2 -0.7 periplasmic chaperone compare
ECD_01288 -1.2 -1.5 putative sugar ABC transporter permease compare
ECD_03730 -1.2 -3.6 TatABCE protein translocation system subunit compare
ECD_01876 -1.2 -2.2 UPF0149 family protein compare
ECD_03297 -1.2 -4.6 DUF2756 family protein compare
ECD_01011 -1.2 -0.7 putative malonic semialdehyde reductase compare
ECD_02155 -1.1 -1.7 DUF1175 family protein, putative host defense protein compare
ECD_00872 -1.1 -1.8 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein compare
ECD_02729 -1.1 -2.1 flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair compare
ECD_01401 -1.1 -1.5 gamma-aminobutyraldehyde dehydrogenase compare
ECD_00977 -1.1 -2.4 hydrogenase 1, b-type cytochrome subunit compare
ECD_04093 -1.1 -1.9 GGCT-like protein compare
ECD_02055 -1.1 -2.9 inner membrane putative sensory kinase in two-component system with YehT compare
ECD_00865 -1.1 -2.0 arginine ABC transporter periplasmic binding protein compare
ECD_02882 -1.1 -4.1 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter compare
ECD_00742 -1.1 -2.4 biotin synthase compare
ECD_02436 -1.1 -3.0 mutarotase superfamily protein, YphB family compare
ECD_01225 -1.1 -1.4 putative DGPF domain-containing enzyme compare
ECD_00453 -1.1 -2.6 tRNA 2-selenouridine synthase, selenophosphate-dependent compare
ECD_02076 -1.1 -0.8 dihydropyrimidine dehydrogenase, NADH-dependent, subunit C compare
ECD_03017 -1.1 -1.4 outer membrane lipoprotein compare
ECD_01713 -1.1 -1.1 succinylglutamate desuccinylase compare
ECD_01696 -1.1 -1.1 2-deoxyglucose-6-P phosphatase compare
ECD_t00038 -1.0 -1.3 tRNA-Arg compare
ECD_04309 -1.0 -1.1 uncharacterized protein compare
ECD_01928 -1.0 -1.2 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase compare
ECD_01632 -1.0 -2.3 cyclopropane fatty acyl phospholipid synthase, SAM-dependent compare
ECD_00997 -1.0 -1.5 periplasmic sensory protein associated with the TorRS two-component regulatory system compare
ECD_02346 -1.0 -1.7 aldehyde oxidoreductase, ethanolamine utilization protein compare
ECD_02840 -1.0 -0.8 secretin (GspDbeta) OM localization lipoprotein pilotin compare
ECD_01198 -1.0 -1.7 putative invasin compare
ECD_00434 -1.0 -0.8 putative DNA-binding transcriptional regulator compare
ECD_04203 -1.0 -3.2 putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase compare
ECD_00933 -1.0 -1.3 outer membrane porin 1a (Ia compare
ECD_00379 -1.0 -4.8 protoheme IX farnesyltransferase compare
ECD_00048 -1.0 -1.9 putative 4Fe-4S ferredoxin-type protein compare
ECD_01726 -1.0 -1.3 molybdopterin synthase sulfurtransferase compare
ECD_02732 -1.0 -1.1 UPF0267 family protein compare
ECD_02206 -1.0 -1.1 NADH:ubiquinone oxidoreductase, chain I compare
ECD_02899 -1.0 -0.9 inner membrane protein compare
ECD_00420 -1.0 -0.8 adenine phosphoribosyltransferase compare
ECD_00966 -0.9 -2.0 DNA helicase IV compare
ECD_01955 -0.9 -2.7 mannose-1-phosphate guanyltransferase compare
ECD_00982 -0.9 -1.0 cytochrome bd-II oxidase, subunit II compare
ECD_02212 -0.9 -2.6 NADH:ubiquinone oxidoreductase, chain B compare
ECD_02036 -0.9 -0.7 hypothetical protein compare
ECD_00142 -0.9 -2.5 poly(A) polymerase compare
ECD_01820 -0.9 -1.9 phosphoribosylglycinamide formyltransferase 2 compare
ECD_00353 -0.9 -1.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
ECD_00585 -0.9 -1.1 citrate lyase, acyl carrier (gamma) subunit compare
ECD_01219 -0.9 -1.0 oligopeptide ABC transporter permease compare
ECD_01591 -0.9 -1.2 PLP-dependent beta-cystathionase and maltose regulon regulator compare
ECD_01634 -0.9 -1.5 multidrug efflux system transporter compare
ECD_01424 -0.9 -0.7 nitrate reductase 2 (NRZ), delta subunit (assembly subunit) compare
ECD_00322 -0.9 -0.8 putative transcriptional regulator compare
ECD_02667 -0.9 -4.1 exonuclease V (RecBCD complex), alpha chain compare
ECD_03735 -0.9 -3.0 NAD(P)H-flavin reductase compare
ECD_03590 -0.9 -0.6 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase compare
ECD_03079 -0.9 -3.5 DUF1016 family protein in the PD-(D/E)XK nuclease superfamily compare
ECD_00156 -0.9 -1.6 UPF0126 family inner membrane protein compare
ECD_02780 -0.9 -3.4 putative PilT family AAA+ ATPase compare
ECD_00552 -0.9 -1.1 stimulator of EntF adenylation activity, MbtH-like compare
ECD_01374 -0.9 -1.9 cytochrome b561 compare
ECD_02175 -0.9 -0.9 inactive PncC family protein compare
ECD_01103 -0.9 -1.0 beta N-acetyl-glucosaminidase compare
ECD_04251 -0.9 -1.7 salt-inducible putative ABC transporter periplasmic binding protein compare
ECD_00807 -0.9 -0.6 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx compare
ECD_01013 -0.9 -1.5 putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity compare
ECD_01717 -0.9 -2.2 succinylornithine transaminase, PLP-dependent compare
ECD_00803 -0.9 -0.7 repressor of biofilm formation by indole transport regulation compare
ECD_02548 -0.9 -1.5 regulatory protein for RecA compare
ECD_01434 -0.9 -1.2 formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible compare
ECD_01216 -0.9 -1.3 UPF0056 family inner membrane protein compare
ECD_02210 -0.9 -1.2 NADH:ubiquinone oxidoreductase, chain E compare
ECD_01953 -0.9 -1.2 colanic biosynthesis UDP-glucose lipid carrier transferase compare
ECD_02373 -0.8 -1.2 hydrogenase 4, 4Fe-4S subunit compare
ECD_01159 -0.8 -0.6 translesion error-prone DNA polymerase V subunit; DNA polymerase activity compare
ECD_00584 -0.8 -2.3 citrate lyase, citryl-ACP lyase (beta) subunit compare
ECD_03472 -0.8 -5.0 putative polysaccharide deacetylase compare
ECD_01610 -0.8 -1.6 anhydro-N-acetylmuramic acid kinase compare
ECD_00077 -0.8 -2.1 leu operon leader peptide compare
ECD_02220 -0.8 -0.7 UPF0208 family inner membrane protein compare
ECD_02136 -0.8 -1.9 ecotin, a serine protease inhibitor compare
ECD_01261 -0.8 -1.9 global regulator of transcription; DeoR family compare
ECD_02205 -0.8 -1.2 NADH:ubiquinone oxidoreductase, membrane subunit J compare
ECD_03469 -0.8 -2.8 putative rhodanese-related sulfurtransferase compare
ECD_01174 -0.8 -1.3 dihydroxyacetone kinase, C-terminal domain compare
ECD_00335 -0.8 -1.1 shikimate kinase II compare
ECD_01082 -0.8 -1.6 23S rRNA pseudouridine(955,2504,2580) synthase compare
ECD_02298 -0.8 -2.6 glucokinase compare
ECD_03591 -0.8 -1.2 tryptophanase leader peptide compare
ECD_03511 -0.8 -4.4 glutamate transporter compare
ECD_04252 -0.8 -1.8 uncharacterized protein compare
ECD_02249 -0.8 -1.8 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme compare
ECD_02349 -0.8 -1.5 phosphate acetyltransferase compare
ECD_02202 -0.8 -1.7 NADH:ubiquinone oxidoreductase, membrane subunit M compare
ECD_00980 -0.8 -2.4 hydrogenase-1 protein nickel incorporation factor compare
ECD_00753 -0.8 -1.6 putative acetate transporter; BAX Inhibitor-1 family inner membrane protein compare
ECD_03678 -0.8 -2.9 putative uroporphyrinogen III methyltransferase compare
ECD_00859 -0.8 -1.3 putrescine ABC transporter periplasmic binding protein compare
ECD_01842 -0.8 -1.2 tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent compare
ECD_03967 -0.8 -2.5 ribophosphonate triphosphate hydrolase compare
ECD_00423 -0.8 -1.7 gap repair protein compare
ECD_02208 -0.8 -2.5 NADH:ubiquinone oxidoreductase, chain G compare
ECD_03238 -0.8 -1.6 D-ribulose-5-phosphate 3-epimerase compare
ECD_01236 -0.8 -2.5 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase compare
ECD_01784 -0.8 -1.7 L-serine dehydratase 1 compare


Specific Phenotypes

For 15 genes in this experiment

For phage MOI 10 in Escherichia coli BL21

For phage MOI 10 across organisms