Experiment set7S20 for Escherichia coli BL21

Compare to:

Laval1257

Group: phage
Media: LB_plus_SM_buffer + MOI 10
Culturing: BL21_ML4, 48 well microplate, Aerobic, at 37 (C), shaken=double orbital, continuous, 205cpm
By: Lucas on 10/18/23
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride

Specific Phenotypes

For 15 genes in this experiment

For phage MOI 10 in Escherichia coli BL21

For phage MOI 10 across organisms

SEED Subsystems

Subsystem #Specific
Maltose and Maltodextrin Utilization 4
D-Galacturonate and D-Glucuronate Utilization 2
Alginate metabolism 1
DNA repair, bacterial 1
DNA repair, bacterial RecFOR pathway 1
LOS core oligosaccharide biosynthesis 1
Protein chaperones 1
Trehalose Uptake and Utilization 1
pVir Plasmid of Campylobacter 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
starch degradation I 3 1 1
glycogen degradation I 8 8 1