Experiment set7S187 for Escherichia coli BL21

Compare to:

Bas30

200 most detrimental genes:

  gene name fitness t score description  
ECD_01482 +1.2 3.0 succinate semialdehyde dehydrogenase, NAD(P)+-dependent compare
ECD_00807 +0.9 1.3 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx compare
ECD_03766 +0.8 3.5 6-deoxy-6-sulfofructose-1-phosphate aldolase compare
ECD_01575 +0.8 1.0 dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme compare
ECD_03837 +0.8 2.3 putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme compare
ECD_01040 +0.8 2.3 curli assembly protein compare
ECD_04194 +0.8 2.2 uncharacterized protein compare
ECD_02820 +0.8 1.4 hypothetical protein compare
ECD_02036 +0.8 1.4 hypothetical protein compare
ECD_00941 +0.8 2.1 NAD(P)H-dependent FMN reductase compare
ECD_01599 +0.7 1.5 SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex compare
ECD_01589 +0.7 1.8 transcriptional repressor of Mal regulon compare
ECD_02365 +0.7 1.3 palmitoyl-CoA esterase activity, uncertain physiological substrate compare
ECD_00706 +0.7 2.3 putative periplasmic protein compare
ECD_04172 +0.7 2.7 putative methyltransferase compare
ECD_03453 +0.7 1.3 DUF3302 family inner membrane protein compare
ECD_02033 +0.7 2.0 hypothetical protein compare
ECD_00432 +0.7 1.5 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase compare
ECD_01216 +0.7 2.3 UPF0056 family inner membrane protein compare
ECD_00230 +0.7 1.8 hypothetical protein compare
ECD_01601 +0.6 1.2 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex compare
ECD_02116 +0.6 2.9 spermidine nucleoid-associated protein compare
ECD_02524 +0.6 2.5 DUF2892 family inner membrane rhodanese compare
ECD_00326 +0.6 1.0 DUF2755 family inner membrane protein compare
ECD_02238 +0.6 1.1 colicin V production protein compare
ECD_03481 +0.6 2.3 UDP-galactose:(Galactosyl) LPS alpha1,2-galactosyltransferase compare
ECD_02910 +0.6 2.5 ATP-Grasp family ATPase compare
ECD_01898 +0.6 1.2 nitrogen assimilation regulon transcriptional regulator; autorepressor compare
ECD_01167 +0.6 1.1 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A compare
ECD_01694 +0.6 1.5 fructosamine kinase family protein compare
ECD_02404 +0.6 0.6 BamABCDE complex OM biogenesis lipoprotein compare
ECD_02330 +0.6 1.2 penicillin binding protein PBP4B; weak DD-carboxypeptidase activity compare
ECD_02473 +0.6 1.9 autonomous glycyl radical cofactor compare
ECD_00311 +0.6 1.8 regulator protein that represses frmRAB operon compare
ECD_00818 +0.6 1.5 hypothetical protein compare
ECD_01577 +0.6 1.4 response regulator of RstAB two-component system compare
ECD_02109 +0.6 1.5 microcin C ABC transporter permease compare
ECD_01486 +0.6 1.3 UPF0056 family inner membrane protein compare
ECD_01352 +0.6 2.0 fermentative D-lactate dehydrogenase, NAD-dependent compare
ECD_01375 +0.5 1.0 putative periplasmic protein compare
ECD_01064 +0.5 1.6 putative oxidoreductase compare
ECD_03355 +0.5 0.8 Putative LuxR family repressor for dicarboxylate transport compare
ECD_00594 +0.5 1.5 fluoride efflux channel, dual topology membrane protein compare
ECD_02382 +0.5 1.9 putative processing element hydrogenase 4 compare
ECD_04158 +0.5 3.0 anti-sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator compare
ECD_04145 +0.5 2.0 IS911 protein compare
ECD_00082 +0.5 1.0 RsmH methytransferase inhibitor compare
ECD_01610 +0.5 2.9 anhydro-N-acetylmuramic acid kinase compare
ECD_01289 +0.5 1.7 putative sugar ABC transporter permease compare
ECD_00539 +0.5 2.2 dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive compare
ECD_00322 +0.5 1.0 putative transcriptional regulator compare
ECD_00464 +0.5 1.6 glycerate kinase II compare
ECD_00188 +0.5 1.9 UPF0253 family protein compare
ECD_03059 +0.5 2.6 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein compare
ECD_01559 +0.5 1.0 oxidoreductase, membrane subunit compare
ECD_01230 +0.5 1.0 outer membrane protein W compare
ECD_02345 +0.5 1.0 ethanolamine utilization protein, HSP70/actin superfamily protein compare
ECD_00231 +0.5 1.8 peptide chain release factor 2 compare
ECD_01635 +0.5 1.6 autotransporter adhesin-related protein compare
ECD_03026 +0.5 3.1 U32 peptidase family protein compare
ECD_00862 +0.5 1.6 putrescine ABC transporter permease compare
ECD_01498 +0.5 0.9 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase compare
ECD_02056 +0.5 1.7 transcriptional activator of csgD and csgBA compare
ECD_01044 +0.5 0.7 OPG biosynthetic transmembrane succinyltransferase compare
ECD_02091 +0.5 0.8 ribonucleoside hydrolase 2 compare
ECD_02278 +0.5 1.3 multidrug resistance efflux pump membrane fusion protein compare
ECD_02438 +0.5 0.7 putative sugar ABC transporter permease compare
ECD_03848 +0.5 3.4 transcriptional repressor of fabA and fabB compare
ECD_02972 +0.5 1.7 DUF805 family inner membrane protein compare
ECD_01727 +0.5 1.5 CDP-alcohol phosphatidyltransferase family inner membrane protein compare
ECD_00774 +0.5 0.9 23S rRNA m(6)A1618 methyltransferase, SAM-dependent compare
ECD_03814 +0.5 2.8 ribonuclease E (RNase E) inhibitor protein compare
ECD_00753 +0.5 1.8 putative acetate transporter; BAX Inhibitor-1 family inner membrane protein compare
ECD_02351 +0.5 1.4 RmlC-like cupin domain protein compare
ECD_00242 +0.5 0.9 moco insertion factor for PaoABC aldehyde oxidoreductase compare
ECD_00872 +0.5 1.9 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein compare
ECD_03375 +0.5 3.6 putative periplasmic M16 family chaperone compare
ECD_01492 +0.5 1.4 cysteine and O-acetyl-L-serine efflux system compare
ECD_00506 +0.5 1.3 DLP12 prophage; putative phage lysis protein compare
ECD_01946 +0.5 1.0 dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit compare
ECD_03081 +0.5 2.1 DUF386 family protein, cupin superfamily compare
ECD_03434 +0.5 2.5 putative L-xylulose 5-phosphate 3-epimerase compare
ECD_02218 +0.5 1.9 sugar phosphatase compare
ECD_01912 +0.4 1.3 DNA gyrase inhibitor compare
ECD_00763 +0.4 1.7 DUF1956 domain-containing tetR family putative transcriptional regulator compare
ECD_02321 +0.4 1.2 cysteine synthase B (O-acetylserine sulfhydrolase B) compare
ECD_01786 +0.4 1.5 putative membrane protein/conserved protein compare
ECD_03074 +0.4 3.4 isoprenoid biosynthesis protein with amidotransferase-like domain compare
ECD_01627 +0.4 1.4 putative MFS transporter, inner membrane protein compare
ECD_01561 +0.4 1.2 H(+)/Cl(-) exchange transporter compare
ECD_03009 +0.4 2.6 putative fimbrial-like adhesin protein compare
ECD_01445 +0.4 1.1 D,D-dipeptide ABC transporter periplasmic binding protein compare
ECD_00985 +0.4 1.0 O-antigen capsule forming protein-tyrosine-phosphatase; Etk-P dephosphorylase compare
ECD_01441 +0.4 0.9 D,D-dipeptide ABC transporter ATPase compare
ECD_00513 +0.4 1.9 hypothetical protein compare
ECD_02475 +0.4 1.8 putative methyltransferase compare
ECD_01675 +0.4 1.4 UPF0061 family protein compare
ECD_02770 +0.4 2.3 uncharacterized protein compare
ECD_00969 +0.4 1.3 putative CoA-binding protein compare
ECD_02352 +0.4 2.0 putative P-loop NTPase ethanolamine utilization protein compare
ECD_03346 +0.4 2.3 16S rRNA m(2)G1516 methyltransferase, SAM-dependent compare
ECD_02030 +0.4 1.9 putative family 25 glycosyl hydrolase compare
ECD_02191 +0.4 1.7 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase compare
ECD_03079 +0.4 2.7 DUF1016 family protein in the PD-(D/E)XK nuclease superfamily compare
ECD_01014 +0.4 1.2 ureidoacrylate amidohydrolase compare
ECD_04184 +0.4 1.5 fimbrial protein involved in type 1 pilus biosynthesis compare
ECD_01403 +0.4 1.1 DUF2526 family protein compare
ECD_03308 +0.4 1.0 PanD autocleavage accelerator, panothenate synthesis compare
ECD_01652 +0.4 1.5 component of SufBCD complex compare
ECD_00448 +0.4 1.6 Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor compare
ECD_02334 +0.4 1.5 GNAT family putative N-acetyltransferase compare
ECD_03844 +0.4 2.8 acetylglutamate kinase compare
ECD_01630 +0.4 0.8 LysR family putative transcriptional regulator compare
ECD_00858 +0.4 0.7 negative regulator of motility; multicopy suppressor of coaA(Ts) compare
ECD_03977 +0.4 1.5 phosphonate ABC transporter ATPase compare
ECD_01107 +0.4 1.1 repressor for bhsA(ycfR) compare
ECD_01221 +0.4 1.2 oligopeptide ABC transporter ATPase compare
ECD_02112 +0.4 2.1 bicyclomycin/cysteine/sulfonamide efflux transporter compare
ECD_02181 +0.4 2.9 fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase compare
ECD_02192 +0.4 1.2 isochorismate synthase 2 compare
ECD_01623 +0.4 1.2 putative ATP-dependent helicase compare
ECD_02018 +0.4 1.9 galactitol-specific enzyme IIC component of PTS compare
ECD_02384 +0.4 1.1 putative formate transporter compare
ECD_02055 +0.4 1.8 inner membrane putative sensory kinase in two-component system with YehT compare
ECD_03078 +0.4 3.1 glutamate synthase, 4Fe-4S protein, small subunit compare
ECD_02250 +0.4 0.6 uncharacterized protein compare
ECD_03364 +0.4 2.6 acid resistance regulon transcriptional activator; autoactivator compare
ECD_02120 +0.4 1.5 response regulator in two-component regulatory system with NarQ compare
ECD_00032 +0.4 0.5 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) compare
ECD_01079 +0.4 1.8 flagellar hook-filament junction protein compare
ECD_04152 +0.4 2.3 hypothetical protein compare
ECD_03581 +0.4 1.5 DUF937 family protein compare
ECD_03057 +0.4 2.6 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein compare
ECD_04048 +0.4 0.9 DUF2170 family protein compare
ECD_00864 +0.4 1.1 23S rRNA m(5)U747 methyltransferase, SAM-dependent compare
ECD_00810 +0.4 1.4 uncharacterized protein compare
ECD_01133 +0.4 1.8 23S rRNA pseudouridine(2457) synthase compare
ECD_02087 +0.4 1.5 UPF0324 family inner membrane protein compare
ECD_04142 +0.4 1.1 GFO/IDH/MOCA family putative oxidoreductase NAD(P)-dependent compare
ECD_03348 +0.4 2.5 23S rRNA m(6)A2030 methyltransferase, SAM-dependent compare
ECD_03098 +0.4 1.8 cadmium and peroxide resistance protein, stress-induced compare
ECD_00246 +0.4 1.0 DUF1440 family inner membrane acid resistance protein compare
ECD_01241 +0.4 0.9 putative RNA binding protein compare
ECD_00477 +0.4 1.4 DUF457 family inner membrane protein compare
ECD_01013 +0.4 1.3 putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity compare
ECD_02021 +0.4 2.3 D-tagatose 1,6-bisphosphate aldolase 2, subunit compare
ECD_01223 +0.4 0.7 cardiolipin synthase 1 compare
ECD_01225 +0.4 0.7 putative DGPF domain-containing enzyme compare
ECD_02428 +0.4 1.5 putative 3-phenylpropionic transporter compare
ECD_00883 +0.4 1.5 macrolide transporter membrane fusion protein (MFP) component compare
ECD_04171 +0.4 2.6 putative endoglucanase with Zn-dependent exopeptidase domain compare
ECD_00660 +0.4 1.2 conserved protein, rhs-like protein compare
ECD_03944 +0.4 1.2 formate-dependent nitrite reductase, 4Fe4S subunit compare
ECD_01264 +0.4 1.0 putative oxidoreductase compare
ECD_03895 +0.4 2.1 DUF3811 family protein compare
ECD_01478 +0.4 0.7 altronate oxidoreductase, NAD-dependent compare
ECD_04170 +0.4 1.2 putative enzyme IIB component of PTS compare
ECD_00409 +0.4 2.1 DUF1449 family inner membrane protein compare
ECD_00783 +0.4 1.2 hypothetical protein compare
ECD_04154 +0.4 2.8 ferric citrate ABC transporter permease compare
ECD_02918 +0.4 1.0 fimbrial protein compare
ECD_00290 +0.4 2.1 cytosine transporter compare
ECD_02035 +0.4 1.4 hypothetical protein compare
ECD_01969 +0.4 0.7 inner membrane protein compare
ECD_01966 +0.4 1.2 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase compare
ECD_00830 +0.4 1.3 hypothetical protein compare
ECD_02774 +0.4 0.8 Zn-dependent metalloprotease-related protein compare
ECD_02031 +0.4 1.1 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase compare
ECD_03886 +0.3 2.6 malate synthase A compare
ECD_03122 +0.3 0.9 acrAB operon transcriptional repressor compare
ECD_02100 +0.3 1.2 UPF0153 cysteine cluster protein compare
ECD_00450 +0.3 0.7 conserved protein, rhs-like protein compare
ECD_03998 +0.3 0.9 GNAT family putative N-acetyltransferase compare
ECD_00228 +0.3 1.3 mRNA interferase toxin of the YafO-YafN toxin-antitoxin system compare
ECD_02072 +0.3 1.7 cytidine/deoxycytidine deaminase compare
ECD_00628 +0.3 1.8 heat shock protein, putative NTPase; PhoH-like protein compare
ECD_03072 +0.3 1.5 Mg(2+)-starvation-stimulated protein compare
ECD_02834 +0.3 1.1 putative type II secretion protein GspH compare
ECD_02869 +0.3 1.3 maturation protease for hydrogenase 2 compare
ECD_04263 +0.3 1.9 SMP_2 family putative membrane-anchored periplasmic protein compare
ECD_03019 +0.3 1.5 putative nucleoside-diphosphate-sugar epimerase compare
ECD_01209 +0.3 1.2 UPF0225 family protein compare
ECD_03058 +0.3 2.4 OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein compare
ECD_02798 +0.3 2.0 hypothetical protein compare
ECD_01655 +0.3 0.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
ECD_00592 +0.3 0.9 phospholipid:lipid A palmitoyltransferase compare
ECD_00412 +0.3 1.5 Hha toxicity attenuator; conjugation-related protein compare
ECD_00569 +0.3 1.0 Spo0J family protein, ParB-like nuclease domain compare
ECD_01755 +0.3 1.0 putative diguanylate cyclase compare
ECD_00567 +0.3 1.8 putative oxidoreductase compare
ECD_00997 +0.3 1.0 periplasmic sensory protein associated with the TorRS two-component regulatory system compare
ECD_01261 +0.3 1.3 global regulator of transcription; DeoR family compare
ECD_01390 +0.3 1.0 IS609 transposase B compare
ECD_03403 +0.3 2.0 glyoxylate/hydroxypyruvate reductase B compare
ECD_00624 +0.3 2.1 hypothetical protein compare
ECD_01163 +0.3 1.3 SpoVR family stationary phase protein compare
ECD_01782 +0.3 0.9 aminodeoxychorismate synthase, subunit I compare
ECD_02102 +0.3 1.6 putative NAD-dependent D-mannonate oxidoreductase compare
ECD_04167 +0.3 1.6 putative phosphotransferase enzyme IIA component compare
ECD_00582 +0.3 1.2 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare


Specific Phenotypes

For 1 genes in this experiment

For phage MOI 10 in Escherichia coli BL21

For phage MOI 10 across organisms