Experiment set7IT085 for Escherichia coli BW25113

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Sodium Acetate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
b4015 aceA -4.3 -9.9 isocitrate lyase (NCBI) compare
b1702 pps -3.8 -13.2 phosphoenolpyruvate synthase (NCBI) compare
b0390 aroM -2.9 -8.6 hypothetical protein (NCBI) compare
b4396 rob -1.8 -9.1 DNA-binding transcriptional activator (NCBI) compare
b3779 gpp -1.7 -10.3 guanosine pentaphosphatase/exopolyphosphatase (NCBI) compare
b3456 livM -1.7 -7.9 leucine/isoleucine/valine transporter subunit (NCBI) compare
b3457 livH -1.6 -5.7 leucine/isoleucine/valine transporter subunit (NCBI) compare
b2463 maeB -1.6 -5.3 malic enzyme (NCBI) compare
b3460 livJ -1.4 -8.0 leucine/isoleucine/valine transporter subunit (NCBI) compare
b0966 hspQ -1.3 -6.3 DNA-binding protein, hemimethylated (RefSeq) compare
b0583 entD -1.2 -5.3 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex (NCBI) compare
b3995 rsd +1.0 5.2 stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) compare
b0661 miaB +1.1 8.1 isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) compare
b3516 gadX +1.3 11.1 DNA-binding transcriptional dual regulator (NCBI) compare
b3146 yraL +1.4 9.9 predicted methyltransferase (NCBI) compare
b4141 yjeH +1.4 11.3 predicted transporter (NCBI) compare
b0388 aroL +1.4 10.1 shikimate kinase II (NCBI) compare
b1784 yeaH +1.5 10.1 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b1422 ydcI +1.6 12.0 putative transcriptional regulator LYSR-type (VIMSS) compare
b1783 yeaG +1.6 12.5 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b1191 b1191 +1.8 7.7 orf, hypothetical protein (VIMSS) compare
b3131 agaR +1.8 9.3 DNA-binding transcriptional dual regulator (NCBI) compare
b3512 GadE +1.8 10.8 acid-responsive regulator of gadA and gadBC (Katherine Huang) compare
b1188 ycgB +1.8 8.4 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b3260 dusB +1.9 8.1 tRNA-dihydrouridine synthase B (NCBI) compare
b3752 rbsK +3.7 10.4 ribokinase (NCBI) compare
b0382 yaiB +6.1 54.5 hypothetical protein (NCBI) compare


Specific phenotypes for carbon source Sodium acetate across organisms