| | gene | name | fitness | t score | description | |
|---|
| b1129 | phoQ | -6.3 | -8.6 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1130 | phoP | -6.1 | -9.3 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3026 | qseC | -5.7 | -3.9 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4702 | mgtL | -5.5 | -3.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0738 | tolR | -5.3 | -3.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2282 | nuoH | -5.2 | -5.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b4242 | mgtA | -5.2 | -21.6 | magnesium transporter (NCBI) | compare |
| b0222 | lpcA | -5.0 | -5.7 | phosphoheptose isomerase (NCBI) | compare |
| b0726 | sucA | -5.0 | -3.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3631 | rfaG | -5.0 | -26.3 | glucosyltransferase I (NCBI) | compare |
| b3620 | rfaF | -4.8 | -8.6 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1830 | prc | -4.7 | -11.0 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0720 | gltA | -4.7 | -9.3 | citrate synthase (NCBI) | compare |
| b2830 | nudH | -4.6 | -3.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0053 | surA | -4.5 | -4.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3630 | rfaP | -4.4 | -19.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3619 | rfaD | -4.4 | -7.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3621 | rfaC | -4.4 | -10.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0462 | acrB | -4.0 | -16.2 | multidrug efflux system protein (NCBI) | compare |
| b3035 | tolC | -4.0 | -11.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3842 | rfaH | -4.0 | -9.1 | transcriptional activator RfaH (NCBI) | compare |
| b1236 | galU | -3.9 | -9.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3229 | sspA | -3.9 | -7.0 | stringent starvation protein A (NCBI) | compare |
| b0463 | acrA | -3.7 | -9.6 | multidrug efflux system (NCBI) | compare |
| b2285 | nuoE | -3.7 | -3.9 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3725 | pstB | -3.7 | -2.5 | phosphate transporter subunit (NCBI) | compare |
| b3236 | mdh | -3.6 | -8.7 | malate dehydrogenase (NCBI) | compare |
| b2287 | nuoB | -3.6 | -4.8 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0145 | dksA | -3.6 | -6.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3741 | gidA | -3.6 | -11.8 | glucose-inhibited division protein A (NCBI) | compare |
| b2512 | yfgL | -3.5 | -8.6 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3405 | ompR | -3.5 | -7.3 | osmolarity response regulator (NCBI) | compare |
| b1677 | lpp | -3.3 | -4.3 | murein lipoprotein (NCBI) | compare |
| b2284 | nuoF | -3.2 | -7.1 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0739 | tolA | -3.2 | -6.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0740 | tolB | -3.1 | -7.6 | translocation protein TolB precursor (NCBI) | compare |
| b0200 | gmhB | -3.1 | -3.5 | hypothetical protein (NCBI) | compare |
| b2283 | nuoG | -2.9 | -8.4 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b0737 | tolQ | -2.9 | -4.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4481 | rffT | -2.9 | -6.5 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3632 | rfaQ | -2.8 | -17.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3728 | pstS | -2.8 | -6.8 | phosphate transporter subunit (NCBI) | compare |
| b3463 | ftsE | -2.8 | -6.8 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3706 | trmE | -2.7 | -6.4 | tRNA modification GTPase (NCBI) | compare |
| b3627 | rfaI | -2.7 | -12.8 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b3052 | rfaE | -2.7 | -6.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3791 | rffA | -2.7 | -8.9 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2276 | nuoN | -2.6 | -5.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0114 | aceE | -2.6 | -4.6 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0688 | pgm | -2.5 | -4.1 | phosphoglucomutase (NCBI) | compare |
| b3839 | tatC | -2.5 | -8.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3163 | nlpI | -2.5 | -5.7 | hypothetical protein (NCBI) | compare |
| b3082 | ygjM | -2.5 | -2.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1192 | ldcA | -2.5 | -5.7 | L,D-carboxypeptidase A (NCBI) | compare |
| b2280 | nuoJ | -2.5 | -5.0 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0741 | pal | -2.5 | -5.3 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2286 | nuoC | -2.4 | -4.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3790 | rffC | -2.4 | -5.0 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0088 | murD | -2.3 | -2.6 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3811 | xerC | -2.2 | -4.4 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1861 | ruvA | -2.2 | -2.6 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3628 | rfaB | -2.1 | -10.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3462 | ftsX | -2.1 | -6.3 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1863 | ruvC | -2.0 | -4.2 | Holliday junction resolvase (NCBI) | compare |
| b2281 | nuoI | -2.0 | -3.6 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0232 | yafN | -2.0 | -1.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b4653 | yicT | -1.9 | -1.7 | no description | compare |
| b3806 | cyaA | -1.9 | -6.0 | adenylate cyclase (NCBI) | compare |
| b3794 | rffM | -1.9 | -6.3 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0683 | fur | -1.9 | -2.7 | ferric uptake regulator (NCBI) | compare |
| b3727 | pstC | -1.9 | -6.2 | phosphate transporter subunit (NCBI) | compare |
| b4172 | hfq | -1.8 | -2.4 | RNA-binding protein Hfq (NCBI) | compare |
| b3784 | rfe | -1.8 | -10.5 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0957 | ompA | -1.8 | -2.9 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3613 | yibP | -1.8 | -5.3 | putative membrane protein (VIMSS) | compare |
| b1860 | ruvB | -1.8 | -2.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b3261 | fis | -1.7 | -3.3 | DNA-binding protein Fis (NCBI) | compare |
| b2741 | rpoS | -1.7 | -4.7 | RNA polymerase sigma factor (NCBI) | compare |
| b3935 | priA | -1.7 | -3.3 | primosome assembly protein PriA (NCBI) | compare |
| b2051 | wcaH | -1.7 | -0.9 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2297 | pta | -1.7 | -2.6 | phosphate acetyltransferase (NCBI) | compare |
| b3194 | yrbE | -1.7 | -6.8 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2279 | nuoK | -1.7 | -1.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0890 | ftsK | -1.7 | -7.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1167 | ymgC | -1.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b2215 | ompC | -1.6 | -6.2 | outer membrane porin protein C (NCBI) | compare |
| b0051 | ksgA | -1.6 | -4.5 | dimethyladenosine transferase (NCBI) | compare |
| b3786 | rffE | -1.6 | -7.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3649 | rpoZ | -1.6 | -2.3 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b2277 | nuoM | -1.6 | -4.8 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3787 | rffD | -1.5 | -7.9 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b2017 | yefM | -1.5 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1960 | vsr | -1.5 | -2.9 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b3442 | yhhZ | -1.5 | -3.9 | hypothetical protein (NCBI) | compare |
| b2278 | nuoL | -1.5 | -5.8 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2330 | yfcB | -1.5 | -2.7 | putative adenine-specific methylase (VIMSS) | compare |
| b2346 | vacJ | -1.5 | -7.2 | predicted lipoprotein (NCBI) | compare |
| b3164 | pnp | -1.5 | -3.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1604 | ydgH | -1.5 | -3.3 | hypothetical protein (NCBI) | compare |
| b4171 | miaA | -1.4 | -3.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2820 | recB | -1.4 | -2.9 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2058 | wcaB | -1.4 | -1.3 | predicted acyl transferase (NCBI) | compare |
| b0437 | clpP | -1.4 | -5.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3250 | mreC | -1.4 | -1.2 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b0548 | ninE | -1.4 | -4.0 | DLP12 prophage; conserved protein (NCBI) | compare |
| b3726 | pstA | -1.4 | -4.5 | phosphate transporter subunit (NCBI) | compare |
| b4139 | aspA | -1.4 | -6.4 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3195 | yrbF | -1.3 | -6.5 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0888 | trxB | -1.3 | -2.7 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3404 | envZ | -1.3 | -4.5 | osmolarity sensor protein (NCBI) | compare |
| b4220 | ytfM | -1.3 | -7.2 | predicted outer membrane protein and surface antigen (NCBI) | compare |
| b2168 | fruK | -1.3 | -2.2 | 1-phosphofructokinase (NCBI) | compare |
| b2617 | smpA | -1.2 | -1.9 | small membrane protein A (VIMSS) | compare |
| b0221 | yafH | -1.2 | -6.7 | putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) | compare |
| b3386 | rpe | -1.2 | -2.0 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3469 | zntA | -1.2 | -6.3 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b4221 | ytfN | -1.2 | -8.2 | hypothetical protein (NCBI) | compare |
| b2699 | recA | -1.2 | -1.8 | recombinase A (NCBI) | compare |
| b0438 | clpX | -1.2 | -5.3 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b4480 | hdfR | -1.1 | -3.4 | transcriptional regulator HdfR (NCBI) | compare |
| b3341 | rpsG | -1.1 | -1.0 | 30S ribosomal protein S7 (NCBI) | compare |
| b3863 | polA | -1.1 | -1.2 | DNA polymerase I (NCBI) | compare |
| b3388 | damX | -1.1 | -7.4 | hypothetical protein (NCBI) | compare |
| b4508 | peaD | -1.1 | -1.8 | putative sensory transduction regulator (VIMSS) | compare |
| b2318 | truA | -1.1 | -3.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3504 | yhiS | -1.1 | -2.9 | hypothetical protein (RefSeq) | compare |
| b0161 | degP | -1.1 | -4.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b3193 | yrbD | -1.1 | -5.3 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2894 | xerD | -1.0 | -1.0 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2189 | proL | -1.0 | -1.9 | tRNA-Pro (NCBI) | compare |
| b1001 | yccE | -1.0 | -1.6 | hypothetical protein (NCBI) | compare |
| b3846 | fadB | -1.0 | -5.6 | fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) | compare |
| b4613 | dinQ | -1.0 | -1.7 | Damage inducible, function unknown (RefSeq) | compare |
| b4203 | rplI | -1.0 | -3.5 | 50S ribosomal protein L9 (NCBI) | compare |
| b1185 | dsbB | -1.0 | -2.7 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0632 | dacA | -1.0 | -4.2 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3764 | yifE | -1.0 | -2.7 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | -1.0 | -1.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2572 | rseA | -0.9 | -3.0 | anti-sigma factor (NCBI) | compare |
| b1105 | ycfM | -0.9 | -2.8 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1150 | ymfR | -0.9 | -1.0 | e14 prophage; predicted protein (NCBI) | compare |
| b3260 | dusB | -0.9 | -3.6 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b3191 | yrbB | -0.9 | -4.4 | orf, hypothetical protein (VIMSS) | compare |
| b2809 | b2809 | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2288 | nuoA | -0.9 | -1.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1984 | asnW | -0.9 | -0.9 | tRNA-Asn (NCBI) | compare |
| b0178 | hlpA | -0.9 | -2.6 | periplasmic chaperone (NCBI) | compare |
| b0729 | sucD | -0.9 | -1.8 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3121 | yhaC | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b4042 | dgkA | -0.9 | -2.2 | diacylglycerol kinase (NCBI) | compare |
| b1324 | tpx | -0.9 | -3.1 | thiol peroxidase (NCBI) | compare |
| b3398 | yrfF | -0.8 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b0357 | yaiN | -0.8 | -2.1 | putative alpha helix chain (VIMSS) | compare |
| b3792 | wzxE | -0.8 | -4.3 | O-antigen translocase (NCBI) | compare |
| b3192 | yrbC | -0.8 | -4.2 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2513 | yfgM | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b2080 | b2080 | -0.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3625 | rfaY | -0.8 | -4.8 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4155 | yjeA | -0.8 | -1.2 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b1281 | pyrF | -0.8 | -1.6 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1928 | yedD | -0.8 | -3.0 | hypothetical protein (NCBI) | compare |
| b2829 | ptsP | -0.8 | -5.2 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b4529 | ydbJ | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b4577 | sgrS | -0.8 | -1.4 | small antisense RNA (NCBI) | compare |
| b4373 | rimI | -0.8 | -2.0 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b4685 | yrbN | -0.8 | -1.2 | expressed protein (RefSeq) | compare |
| b0092 | ddlB | -0.8 | -1.8 | D-alanylalanine synthetase (NCBI) | compare |
| b1429 | tehA | -0.8 | -1.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4618 | tisB | -0.8 | -1.7 | lexA-regulated toxic peptide (RefSeq) | compare |
| b3860 | dsbA | -0.7 | -4.4 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b1805 | fadD | -0.7 | -4.6 | acyl-CoA synthase (NCBI) | compare |
| b4522 | yciX_1 | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b2300 | yfcE | -0.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1273 | yciN | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b4294 | insA-7 | -0.7 | -1.1 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b3053 | glnE | -0.7 | -3.3 | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase (NCBI) | compare |
| b1511 | ydeV | -0.7 | -1.7 | putative kinase (VIMSS) | compare |
| b2205 | napG | -0.7 | -3.2 | quinol dehydrogenase periplasmic component (NCBI) | compare |
| b0131 | panD | -0.7 | -1.6 | aspartate 1-decarboxylase precursor (NCBI) | compare |
| b1977 | asnT | -0.7 | -1.6 | tRNA-Asn (NCBI) | compare |
| b4246 | pyrL | -0.7 | -1.1 | pyrBI operon leader peptide (NCBI) | compare |
| b2516 | yfgA | -0.7 | -3.2 | hypothetical protein (NCBI) | compare |
| b4676 | yoaK | -0.7 | -0.8 | expressed protein (RefSeq) | compare |
| b4407 | thiS | -0.7 | -0.5 | sulfur carrier protein ThiS (NCBI) | compare |
| b0848 | ybjM | -0.7 | -2.6 | predicted inner membrane protein (NCBI) | compare |
| b2071 | yegJ | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b2679 | proX | -0.7 | -1.7 | glycine betaine transporter subunit (NCBI) | compare |
| b3226 | yhcK | -0.7 | -2.7 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b2822 | recC | -0.7 | -2.0 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1305 | pspB | -0.7 | -1.4 | phage shock protein B (NCBI) | compare |
| b3838 | tatB | -0.7 | -2.2 | sec-independent translocase (NCBI) | compare |
| b2853 | ygeI | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b3133 | agaV | -0.7 | -1.6 | PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) | compare |
| b1890 | motA | -0.7 | -2.5 | flagellar motor protein MotA (NCBI) | compare |
| b1819 | manZ | -0.6 | -2.6 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b4093 | phnO | -0.6 | -3.4 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0999 | cbpM | -0.6 | -0.9 | modulator of CbpA co-chaperone (NCBI) | compare |
| b0736 | ybgC | -0.6 | -1.8 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b1088 | yceD | -0.6 | -2.3 | hypothetical protein (NCBI) | compare |
| b2754 | ygbF | -0.6 | -1.3 | orf, hypothetical protein (VIMSS) | compare |