Experiment set7IT062 for Pseudomonas putida KT2440

Compare to:

D-Lysine 10 mM carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_4108 -5.9 -5.8 2-aminoadipate transaminase (EC 2.6.1.39) (from data) compare
PP_3594 -5.5 -8.4 L-lysine and D-lysine ABC transporter, permease component 1 (from data) compare
PP_4493 -5.4 -17.1 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
PP_3593 -4.9 -11.2 L-lysine and D-lysine ABC transporter, substrate-binding component (from data) compare
PP_5257 -4.7 -13.5 L-pipecolate oxidase compare
PP_5258 -4.5 -8.6 L-piperidine-6-carboxylate dehydrogenase compare
PP_3597 -4.3 -5.5 L-lysine and D-lysine ABC transporter, ATPase component (from data) compare
PP_3592 -4.1 -9.9 Transcriptional regulator, RpiR family compare
PP_3595 -4.0 -7.8 L-lysine and D-lysine ABC transporter, permease component 2 (from data) compare
PP_3596 -3.7 -7.8 D-lysine oxidase compare
PP_5260 -2.4 -6.2 2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase) (from data) compare
PP_0383 -1.5 -6.0 Lysine 2-monooxygenase compare
PP_0155 -1.4 -8.0 pyridine nucleotide transhydrogenase, beta subunit compare
PP_0382 -1.3 -5.9 5-aminopentanamidase compare
PP_4860 -1.3 -7.1 putative Mannose-6-phosphate isomerase compare
PP_4666 -1.2 -5.0 3-hydroxyisobutyrate dehydrogenase compare
PP_4295 +1.4 9.5 TetR family transcriptional regulator compare
PP_1058 +1.4 11.9 conserved protein of unknown function compare
PP_1968 +1.5 8.7 TetR family transcriptional regulator compare


Specific phenotypes for carbon source D-Lysine across organisms