Experiment set7IT055 for Pseudomonas putida KT2440

Compare to:

L-Lysine 10 mM carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_5260 -6.1 -8.3 2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase) (from data) conserved
PP_3593 -5.0 -10.2 L-lysine and D-lysine ABC transporter, substrate-binding component (from data) compare
PP_3594 -4.7 -7.8 L-lysine and D-lysine ABC transporter, permease component 1 (from data) conserved
PP_5258 -4.6 -8.7 L-piperidine-6-carboxylate dehydrogenase conserved
PP_2910 -4.4 -11.4 L-2-hydroxyglutarate oxidase compare
PP_3592 -4.4 -9.6 Transcriptional regulator, RpiR family compare
PP_5257 -4.0 -11.4 L-pipecolate oxidase conserved
PP_3595 -3.5 -8.2 L-lysine and D-lysine ABC transporter, permease component 2 (from data) conserved
PP_0382 -3.2 -7.3 5-aminopentanamidase conserved
PP_3596 -3.0 -6.1 D-lysine oxidase compare
PP_2326 -2.7 -7.9 Universal stress protein compare
PP_4493 -2.7 -11.2 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
PP_0213 -2.5 -7.0 succinate-semialdehyde dehydrogenase (NADP+) compare
PP_0383 -2.5 -7.6 Lysine 2-monooxygenase conserved
PP_0384 -2.5 -6.3 Transcriptional regulator, AsnC family conserved
PP_1236 -1.7 -5.7 putative Glycine cleavage system transcriptional repressor compare
PP_4576 -1.5 -6.2 allophanate hydrolase subunit compare
PP_5181 -1.2 -6.9 spermidine/putrescine ABC transporter - periplasmic subunit conserved
PP_0323 +1.1 6.9 sarcosine oxidase subunit beta compare
PP_5358 +1.2 7.2 conserved protein of unknown function compare
PP_5212 +1.6 8.9 Oxidoreductase, iron-sulfur-binding compare
PP_2884 +1.8 9.8 XRE family transcriptional regulator compare
PP_3731 +2.6 18.4 Transcriptional regulator, TetR family compare


Specific phenotypes for carbon source L-Lysine across organisms