Experiment set7IT020 for Agrobacterium fabrum C58

Compare to:

Mannobiose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu1522 +2.2 14.6 transcriptional regulator, LacI family compare
Atu0280 +0.9 2.9 hypothetical protein compare
Atu0545 +0.9 4.4 flagella associated protein compare
Atu0585 +0.9 3.6 hypothetical protein compare
Atu0525 +0.8 5.2 transcriptional regulator, LuxR family compare
Atu0141 +0.8 1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu5121 +0.8 5.5 two component response regulator compare
Atu8165 +0.8 1.7 hypothetical protein compare
Atu4223 +0.8 2.2 sarcosine oxidase delta subunit compare
Atu4099 +0.7 4.1 hypothetical protein compare
Atu8088 +0.7 2.1 hypothetical protein compare
Atu0524 +0.7 3.5 transcriptional regulator, LuxR family compare
Atu0577 +0.7 2.2 FLAF protein compare
Atu8132 +0.7 3.5 hypothetical protein compare
Atu5540 +0.7 1.0 hypothetical protein compare
Atu0548 +0.7 5.4 flagellar L-ring protein precursor compare
Atu6165 +0.7 1.0 hypothetical protein compare
Atu0558 +0.7 4.1 flagellar basal body rod protein compare
Atu0049 +0.7 2.0 hypothetical protein compare
Atu0573 +0.7 3.7 transcriptional regulator compare
Atu0755 +0.7 3.0 hypothetical protein compare
Atu4677 +0.7 1.6 hypothetical protein compare
Atu1467 +0.7 2.6 hypothetical protein compare
Atu6036 +0.7 0.9 entry-exclusion protein compare
Atu0580 +0.7 2.8 flagellar biosynthetic protein compare
Atu1254 +0.7 1.6 transcriptional regulator, ArsR family compare
Atu1223 +0.6 1.8 hypothetical protein compare
Atu2083 +0.6 2.0 DNA repair protein RecN compare
Atu0550 +0.6 5.1 flagellar P-ring protein precursor compare
Atu0563 +0.6 4.3 flagellar motor switch protein FliG compare
Atu0119 +0.6 1.3 hypothetical protein compare
Atu8116 +0.6 3.7 hypothetical protein compare
Atu0578 +0.6 3.4 FlbT post-transcriptional regulator of flagellin compare
Atu0547 +0.6 4.3 flagellar protein compare
Atu0576 +0.6 3.9 flagellar hook-associated protein compare
Atu0570 +0.6 5.2 Chemotaxis protein compare
Atu0784 +0.6 2.5 hypothetical protein compare
Atu0549 +0.6 3.4 hypothetical protein compare
Atu3712 +0.6 1.4 hypothetical protein compare
Atu0579 +0.6 4.0 hook formation protein compare
Atu0566 +0.6 1.5 hypothetical protein compare
Atu3763 +0.6 1.6 hypothetical protein compare
Atu5163 +0.6 1.4 type IV secretion protein AvhB2 compare
Atu0574 +0.6 4.9 flagellar hook protein compare
Atu0559 +0.6 4.6 hypothetical protein compare
Atu0569 +0.6 4.9 flagellar motor protein, PAL/OmpA family compare
Atu0435 +0.6 0.7 tRNA-Gly compare
Atu1565 +0.6 3.0 serine acetyltransferase compare
Atu1846 +0.5 1.2 hypothetical protein compare
Atu0584 +0.5 3.5 hypothetical protein compare
Atu1026 +0.5 1.7 hypothetical protein compare
Atu0546 +0.5 4.6 flagellar biosynthetic protein compare
Atu2626 +0.5 1.4 hypothetical protein compare
Atu8133 +0.5 1.6 hypothetical protein compare
Atu1449 +0.5 1.9 potassium uptake protein compare
Atu5427 +0.5 1.6 hypothetical protein compare
Atu0581 +0.5 4.3 flagellar biosynthesis protein compare
Atu0564 +0.5 3.8 flagellar biosynthetic protein compare
Atu0552 +0.5 3.4 flagellar basal-body rod protein compare
Atu1232 +0.5 1.0 hypothetical protein compare
Atu1660 +0.5 1.4 hypothetical protein compare
Atu0571 +0.5 3.7 chemotaxis MotD protein compare
Atu0984 +0.5 3.4 aminopeptidase N compare
Atu1608 +0.5 2.4 hypothetical protein compare
Atu1083 +0.5 1.6 hypothetical protein compare
Atu0953 +0.5 0.9 hypothetical protein compare
Atu2677 +0.5 1.8 protein tyrosine phosphatase compare
Atu3006 +0.5 1.9 hypothetical protein compare
Atu2662 +0.5 0.8 acetyltransferase compare
Atu0120 +0.5 2.7 hypothetical protein compare
Atu8082 +0.5 1.6 hypothetical protein compare
Atu3527 +0.5 2.8 hypothetical protein compare
Atu4486 +0.5 1.9 nitroreductase compare
Atu0925 +0.5 1.4 hypothetical protein compare
Atu0319 +0.4 0.9 ubiquinone biosynthesis protein compare
Atu5501 +0.4 1.1 hypothetical protein compare
Atu8012 +0.4 1.1 hypothetical protein compare
Atu1760 +0.4 0.8 hypothetical protein compare
Atu4896 +0.4 0.8 acetyltransferase compare
Atu5438 +0.4 2.7 3-oxoacyl-ACP reductase compare
Atu1048 +0.4 1.6 ABC transporter, membrane spanning protein compare
Atu4144 +0.4 0.7 hypothetical protein compare
Atu0553 +0.4 3.5 flagellar hook-basal body complex protein compare
Atu0206 +0.4 1.8 hypothetical protein compare
Atu3291 +0.4 2.6 Lpr family transcriptional regulator compare
Atu0653 +0.4 3.6 hypothetical protein compare
Atu4838 +0.4 2.2 outer membrane lipoprotein compare
Atu1729 +0.4 2.0 putative molybdenum cofactor biosynthesis protein compare
Atu1830 +0.4 2.0 bacterioferritin comigratory protein compare
Atu0560 +0.4 3.6 flagellar motor protein compare
Atu0225 +0.4 0.6 hypothetical protein compare
Atu1110 +0.4 1.2 cytosol aminopeptidase compare
Atu5097 +0.4 2.8 ATP-dependent DNA ligase compare
Atu0890 +0.4 2.6 hypothetical protein compare
Atu0575 +0.4 3.3 flagellar hook associated protein compare
Atu8052 +0.4 0.8 hypothetical protein compare
Atu3216 +0.4 2.1 oligopeptide ABC transporter ATPase compare
Atu3120 +0.4 0.7 hypothetical protein compare
Atu4897 +0.4 0.6 hypothetical protein compare
Atu0582 +0.4 2.6 flagellar biosynthetic protein FLIR compare
Atu0836 +0.4 1.5 Glutathione-S-transferase compare
Atu1245 +0.4 2.2 agmatinase compare
Atu0181 +0.4 2.1 hypothetical protein compare
Atu0331 +0.4 1.1 sigma-54 modulation protein compare
Atu1573 +0.4 0.9 hypothetical protein compare
Atu0134 +0.4 1.0 hypothetical protein compare
Atu3466 +0.4 1.2 ArsR family transcriptional regulator compare
Atu6106 +0.4 1.2 conserved hypothetical protein compare
Atu1302 +0.4 1.1 hypothetical protein compare
Atu1483 +0.4 1.5 cytochrome b561 compare
Atu1326 +0.4 1.6 acetyltransferase compare
Atu6108 +0.4 1.8 alkylphosphonate uptake protein compare
Atu4792 +0.4 0.7 hypothetical protein compare
Atu0883 +0.4 1.9 hypothetical protein compare
Atu4831 +0.4 1.8 hypothetical protein compare
Atu1336 +0.4 1.3 hypothetical protein compare
Atu1857 +0.4 2.2 inositol monophosphatase family protein compare
Atu3506 +0.4 1.9 hypothetical protein compare
Atu0790 +0.4 2.0 hypothetical protein compare
Atu3634 +0.4 1.4 penicillin-binding protein dacf precursor compare
Atu4040 +0.4 1.0 hypothetical protein compare
Atu0554 +0.4 2.1 flagellar basal-body rod protein compare
Atu5104 +0.4 1.7 hypothetical protein compare
Atu0943 +0.4 1.0 hypothetical protein compare
Atu0561 +0.4 2.5 flagellar motor switch protein compare
Atu0986 +0.4 0.7 hypothetical protein compare
Atu8190 +0.4 1.6 hypothetical protein compare
Atu4409 +0.4 1.4 periplasmic nitrate reductase small subunit compare
Atu3467 +0.4 1.4 hypothetical protein compare
Atu0025 +0.4 0.7 hypothetical protein compare
Atu2325 +0.4 0.9 hypothetical protein compare
Atu5462 +0.4 1.9 ABC transporter nucleotide binding/ATPase compare
Atu4217 +0.4 0.5 TetR family transcriptional regulator compare
Atu2184 +0.4 1.9 transcriptional regulator, AsnC family compare
Atu2111 +0.4 2.4 sarcosine oxidase compare
Atu4416 +0.4 1.9 phosphopantetheinyl transferase compare
Atu2271 +0.3 1.7 urease accessory protein compare
Atu1848 +0.3 1.5 transcriptional regulator, GntR family compare
Atu8191 +0.3 1.1 hypothetical protein compare
Atu0557 +0.3 2.4 flagellum-specific ATP synthase compare
Atu1225 +0.3 0.7 hypothetical protein compare
Atu1581 +0.3 1.1 hypothetical protein compare
Atu1701 +0.3 0.9 protein-L-isoaspartate O-methyltransferase compare
Atu4530 +0.3 2.0 TetR family transcriptional regulator compare
Atu3085 +0.3 2.0 hydantoin racemase compare
Atu1147 +0.3 1.8 hypothetical protein compare
Atu8200 +0.3 1.3 hypothetical protein compare
Atu0147 +0.3 1.2 hypothetical protein compare
Atu0274 +0.3 2.3 aminopeptidase compare
Atu1333 +0.3 0.9 outer membrane protein compare
Atu0892 +0.3 1.4 hypothetical protein compare
Atu1494 +0.3 2.2 metal dependent hydrolase compare
Atu2045 +0.3 2.0 HFLK protein compare
Atu5448 +0.3 1.4 hypothetical protein compare
Atu0523 +0.3 2.5 flagellar M-ring protein compare
Atu0568 +0.3 1.5 hypothetical protein compare
Atu2789 +0.3 1.3 hypothetical protein compare
Atu6030 +0.3 1.8 ORF13 hypothetical protein compare
Atu0555 +0.3 2.3 flagellar basal-body rod protein FlgB compare
Atu4449 +0.3 1.9 sorbitol/mannitol ABC transporter permease compare
Atu0968 +0.3 2.0 hypothetical protein compare
Atu5475 +0.3 1.1 hypothetical protein compare
Atu1865 +0.3 1.2 hypothetical protein compare
Atu0827 +0.3 1.9 hypothetical protein compare
Atu2084 +0.3 0.4 hypothetical protein compare
Atu4279 +0.3 1.4 LysR family transcriptional regulator compare
Atu3177 +0.3 1.3 ribonuclease H compare
Atu0152 +0.3 0.8 hypothetical protein compare
Atu3457 +0.3 1.8 ABC transporter permease compare
Atu2286 +0.3 0.4 hypothetical protein compare
Atu4345 +0.3 1.4 hypothetical protein compare
Atu1162 +0.3 2.0 hypothetical protein compare
Atu0263 +0.3 1.6 oxidoreductase compare
Atu1209 +0.3 1.9 transcriptional regulator, LysR family compare
Atu4589 +0.3 1.9 transmembrane transport protein compare
Atu0339 +0.3 1.0 hypothetical protein compare
Atu4458 +0.3 1.8 hypothetical protein compare
Atu1237 +0.3 2.0 glycosyl transferase compare
Atu2812 +0.3 1.2 hypothetical protein compare
Atu0413 +0.3 0.6 stress induced protein compare
Atu4489 +0.3 2.1 outer membrane lipoprotein compare
Atu8177 +0.3 1.3 hypothetical protein compare
Atu5014 +0.3 1.6 plasmid stabilization protein compare
Atu3926 +0.3 1.2 translation initiation inhibitor compare
Atu0081 +0.3 1.8 ribosomal RNA small subunit methyltransferase compare
Atu2752 +0.3 1.2 hypothetical protein compare
Atu0105 +0.3 1.4 hypothetical protein compare
Atu1185 +0.3 1.3 hypothetical protein compare
Atu1617 +0.3 2.1 hypothetical protein compare
Atu3415 +0.3 1.3 ABC transporter substrate binding protein compare
Atu3641 +0.3 2.1 hypothetical protein compare
Atu1346 +0.3 1.6 phenazine antibiotic biosynthesis related protein compare
Atu3541 +0.3 2.0 hypothetical protein compare
Atu3185 +0.3 1.9 glycerol-3-phosphate ABC transporter substrate-binding protein compare
Atu3688 +0.3 1.7 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu1189 +0.3 1.0 hypothetical protein compare
Atu4120 +0.3 1.8 mandelate racemase compare
Atu1640 +0.3 1.1 hypothetical protein compare
Atu0485 +0.3 1.6 hypothetical protein compare
Atu8112 +0.3 2.3 hypothetical protein compare


Specific Phenotypes

For 15 genes in this experiment

For carbon source Mannobiose in Agrobacterium fabrum C58

For carbon source Mannobiose across organisms