Experiment set7IT016 for Agrobacterium fabrum C58

Compare to:

Sucrose carbon source

200 most important genes:

  gene name fitness t score description  
Atu0432 -8.0 -7.8 O-succinylhomoserine sulfhydrylase compare
Atu0679 -7.4 -7.2 ATP phosphoribosyltransferase compare
Atu1687 -7.3 -11.2 anthranilate phosphoribosyltransferase compare
Atu3707 -6.8 -4.7 phosphoserine aminotransferase compare
Atu3754 -6.7 -4.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0099 -6.7 -14.2 prephenate dehydratase compare
Atu3706 -6.5 -8.9 D-3-phosphoglycerate dehydrogenase compare
Atu2264 -6.5 -14.4 2-isopropylmalate synthase compare
Atu0017 -6.4 -4.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1588 -6.3 -12.1 homoserine dehydrogenase compare
Atu2036 -6.2 -17.0 acetolactate synthase III, large subunit compare
Atu2289 -6.1 -21.4 anthranilate synthase component I and II compare
Atu1205 -6.1 -15.8 threonine dehydratase compare
Atu2726 -6.1 -25.2 pyruvate carboxylase compare
Atu2791 -6.1 -10.9 3-isopropylmalate dehydrogenase compare
Atu2718 -6.0 -8.2 homoserine O-succinyltransferase compare
Atu1688 -5.9 -8.1 indole-3-glycerol-phosphate synthase compare
Atu2709 -5.9 -21.6 3-isopropylmalate dehydratase, large subunit compare
Atu0043 -5.8 -4.0 imidazoleglycerol-phosphate dehydratase compare
Atu1750 -5.7 -4.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu2040 -5.7 -7.8 phosphoserine phosphatase compare
Atu0678 -5.7 -9.5 histidyl-tRNA synthetase compare
Atu0298 -5.7 -5.5 orotidine 5 compare
Atu2274 -5.6 -9.7 cation efflux system protein compare
Atu2155 -5.6 -22.0 methionine synthase compare
Atu0537 -5.5 -9.8 histidinol dehydrogenase compare
Atu3784 -5.4 -27.6 glutamate synthase large subunit compare
Atu2747 -5.3 -14.3 hypothetical protein compare
Atu3783 -5.3 -19.2 glutamate synthase subunit beta compare
Atu0400 -5.3 -5.1 orotate phosphoribosyltransferase compare
Atu0038 -5.3 -7.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1140 -5.2 -5.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1845 -5.1 -6.3 phosphoribosylformylglycinamidine synthase I compare
Atu3885 -5.0 -13.0 inositol monophosphatase compare
Atu1141 -5.0 -6.7 Phosphoribosylglycinamide synthetase compare
Atu2790 -4.9 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu1307 -4.9 -6.7 dihydroorotase compare
Atu2650 -4.7 -14.3 glycerol-3-phosphate dehydrogenase compare
Atu0184 -4.7 -3.2 glucokinase compare
Atu0041 -4.7 -4.5 glutamine amidotransferase compare
Atu1075 -4.6 -9.7 amidophosphoribosyltransferase compare
Atu0486 -4.5 -7.5 dihydroorotate dehydrogenase compare
Atu0399 -4.5 -6.8 dihydroorotase compare
Atu1850 -4.4 -3.8 phosphoribosylformylglycinamidine synthetase II compare
Atu1308 -4.3 -6.6 aspartate carbamoyl transferase catalytic subunit compare
Atu1844 -4.2 -4.2 Phosphoribosylformylglycinamidine synthetase compare
Atu3469 -3.9 -4.6 phosphoglyceromutase compare
Atu0647 -3.9 -10.1 phosphoribosylamine--glycine ligase compare
Atu0039 -3.9 -2.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu2015 -3.7 -14.3 aminotransferase compare
Atu3755 -3.7 -7.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0040 -3.7 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2548 -3.6 -17.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1686 -3.6 -17.5 peptidyl-prolyl cis-trans isomerse D compare
Atu0598 -3.6 -13.1 phosphogluconate dehydratase compare
Atu3739 -3.4 -5.1 phosphoglycerate kinase compare
Atu1589 -3.4 -10.4 aminotransferase, class I compare
Atu1456 -3.4 -14.6 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0641 -3.3 -5.7 hypothetical protein compare
Atu0595 -3.1 -10.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3482 -3.1 -14.0 pantoate--beta-alanine ligase compare
Atu1030 -3.1 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1620 -3.1 -13.9 triosephosphate isomerase compare
Atu3483 -3.0 -10.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1454 -2.8 -9.2 siroheme synthase compare
Atu1446 -2.8 -3.5 two component response regulator compare
Atu2123 -2.5 -9.9 methylenetetrahydrofolate reductase compare
Atu4616 -2.4 -3.5 dTDP-4-dehydrorhamnose reductase compare
Atu1359 -2.4 -1.8 dnaK deletion suppressor protein compare
Atu0592 -2.3 -6.7 ABC transporter, membrane spanning protein compare
Atu0591 -2.3 -11.0 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1455 -2.2 -4.9 hypothetical protein compare
Atu0421 -2.2 -2.2 ABC transporter, membrane spanning protein compare
Atu0401 -2.0 -8.6 fructokinase compare
Atu4166 -2.0 -3.3 UDP-glucose 4-epimerase compare
Atu0030 -1.9 -2.6 phosphocarrier protein HPr compare
Atu1685 -1.9 -1.8 hypothetical protein compare
Atu0346 -1.9 -3.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3731 -1.8 -8.1 5-formyltetrahydrofolate cyclo-ligase compare
Atu0332 -1.8 -8.9 RNA polymerase sigma-54 factor compare
Atu8115 -1.7 -4.5 Hypothetical Protein compare
Atu0593 -1.6 -5.8 ABC transporter, membrane spanning protein compare
Atu1163 -1.6 -2.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu6098 -1.5 -0.8 transcriptional regulator, HTH family compare
Atu1028 -1.5 -2.3 hypothetical protein compare
Atu0594 -1.5 -6.7 alpha-glucosidase conserved
Atu0029 -1.5 -5.3 S-adenosylhomocysteine hydrolase compare
Atu1457 -1.5 -1.8 hypothetical protein compare
Atu4075 -1.5 -5.8 glycogen synthase compare
Atu1604 -1.5 -10.6 poly-beta-hydroxybutyrate synthase compare
Atu5430 -1.4 -1.2 hypothetical protein compare
Atu0086 -1.4 -1.6 ribosome-binding factor A compare
Atu1462 -1.4 -9.2 glycine cleavage system protein P2 compare
Atu4711 -1.4 -6.2 two component sensor kinase compare
Atu0422 -1.4 -2.5 ABC transporter, membrane spanning protein compare
Atu1463 -1.3 -5.1 glycine cleavage system component H compare
Atu0185 -1.3 -2.2 methylglyoxal synthase compare
Atu4418 -1.3 -3.7 glutaryl-CoA dehydrogenase compare
Atu1464 -1.2 -5.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu4613 -1.2 -9.9 glycosyltransferase compare
Atu4317 -1.2 -3.4 TetR family transcriptional regulator compare
Atu2017 -1.1 -1.0 hypothetical protein compare
Atu3730 -1.1 -2.2 hypothetical protein compare
Atu4618 -1.1 -7.9 dTDP-rhamnose-3,5-epimerase compare
Atu4614 -1.1 -6.6 glycosyltransferase compare
Atu4615 -1.1 -7.5 glucose-1-phosphate thymidylyltransferase compare
Atu1445 -1.0 -3.0 two component sensor kinase compare
Atu2163 -0.9 -1.6 hypothetical protein compare
Atu4527 -0.9 -1.9 hypothetical protein compare
Atu2209 -0.9 -2.8 pyrroline-5-carboxylate reductase compare
Atu3009 -0.9 -0.7 exopolysaccharide production protein compare
Atu3486 -0.9 -2.9 DeoR family transcriptional regulator compare
Atu3311 -0.9 -7.2 phosphomannose isomerase compare
Atu3496 -0.9 -2.8 hypothetical protein compare
Atu1327 -0.9 -2.8 NADH-ubiquinone oxidoreductase compare
Atu4617 -0.8 -4.8 dTDP-D-glucose-4,6-dehydratase compare
Atu0977 -0.8 -3.6 serine protease DO-like protease compare
Atu8018 -0.8 -1.0 hypothetical protein compare
Atu0953 -0.8 -1.1 hypothetical protein compare
Atu0361 -0.8 -2.0 transcriptional regulator compare
Atu2183 -0.8 -4.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1182 -0.8 -1.4 hypothetical protein compare
Atu1439 -0.8 -1.5 hypothetical protein compare
Atu1076 -0.7 -2.8 colicin V production protein compare
Atu0846 -0.7 -3.2 transcriptional regulator, MarR family compare
Atu4050 -0.7 -1.8 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0435 -0.7 -1.2 tRNA-Gly compare
Atu3727 -0.7 -2.0 hypothetical protein compare
Atu0565 -0.7 -2.3 hypothetical protein compare
Atu8046 -0.7 -1.8 hypothetical protein compare
Atu4887 -0.7 -2.2 hypothetical protein compare
Atu0354 -0.7 -2.0 ferric uptake regulator compare
Atu2728 -0.7 -3.0 beta (1-->2) glucan export ATP-binding protein compare
Atu3353 -0.7 -3.9 mannose-1-phosphate guanylyltransferase compare
Atu0190 -0.7 -4.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0300 -0.7 -3.7 methyltransferase compare
Atu2376 -0.7 -0.5 hypothetical protein compare
Atu4200 -0.7 -1.8 hypothetical protein compare
Atu1572 -0.7 -4.0 hydrolase compare
Atu2205 -0.7 -3.1 transcriptional regulator, MarR family compare
Atu0031 -0.7 -0.9 PTS system, IIA component compare
Atu3426 -0.7 -5.0 sulfonate monooxygenase compare
Atu4173 -0.7 -1.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu3740 -0.6 -3.9 fructose bisphosphate aldolase compare
Atu0188 -0.6 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2192 -0.6 -1.2 hypothetical protein compare
Atu6114 -0.6 -0.9 hypothetical protein compare
Atu2554 -0.6 -1.2 lysyl-tRNA synthetase compare
Atu0723 -0.6 -0.9 FAD dependent oxidoreductase compare
Atu4217 -0.6 -0.8 TetR family transcriptional regulator compare
Atu0368 -0.6 -2.6 tRNA pseudouridine synthase I compare
Atu1677 -0.6 -2.4 queuine tRNA-ribosyltransferase compare
Atu2200 -0.6 -1.4 cold shock protein compare
Atu4773 -0.6 -1.1 two component response regulator compare
Atu2484 -0.6 -1.1 hypothetical protein compare
Atu1447 -0.6 -1.5 two component sensor kinase compare
Atu0885 -0.6 -2.3 hypothetical protein compare
Atu4093 -0.6 -2.5 hypothetical protein compare
Atu2379 -0.6 -4.5 phosphomannomutase compare
Atu1774 -0.6 -3.9 ABC transporter, substrate binding protein (peptide) compare
Atu0535 -0.6 -2.4 hypothetical protein compare
Atu2831 -0.6 -2.3 glucose inhibited division protein A compare
Atu5115 -0.6 -0.5 hypothetical protein compare
Atu0225 -0.6 -0.7 hypothetical protein compare
Atu2115 -0.6 -3.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3267 -0.6 -1.6 dipeptide ABC transporter permease compare
Atu2127 -0.6 -3.7 L-carnitine dehydratase compare
Atu1683 -0.6 -1.5 hypothetical protein compare
Atu1546 -0.6 -2.3 transcriptional regulator, MerR family compare
Atu0479 -0.6 -2.7 ABC transporter, substrate binding protein (amino acid) compare
Atu2034 -0.6 -1.5 transcriptional regulator, ArsR family compare
Atu0931 -0.5 -3.9 penicillin binding protein compare
Atu0845 -0.5 -2.9 hypothetical protein compare
Atu4609 -0.5 -4.1 glycosyltransferase compare
Atu2489 -0.5 -3.0 hypothetical protein compare
Atu3732 -0.5 -3.9 hemolysin compare
Atu2462 -0.5 -1.2 hypothetical protein compare
Atu1344 -0.5 -0.9 hypothetical protein compare
Atu4406 -0.5 -1.3 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu6133 -0.5 -1.7 conserved hypothetical protein compare
Atu8191 -0.5 -0.8 hypothetical protein compare
Atu1339 -0.5 -1.9 ribonuclease E compare
Atu1372 -0.5 -2.4 hypothetical protein compare
Atu0319 -0.5 -0.8 ubiquinone biosynthesis protein compare
Atu6020 -0.5 -1.8 conserved hypothetical protein compare
Atu1469 -0.5 -1.2 hypothetical protein compare
Atu2237 -0.5 -2.0 cytochrome c1 compare
Atu2770 -0.5 -2.1 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2640 -0.5 -2.0 hypothetical protein compare
Atu0124 -0.5 -1.4 hypothetical protein compare
Atu4055 -0.5 -3.0 endo-1,3-1,4-beta-glycanase compare
Atu0971 -0.5 -2.2 two component sensor kinase compare
Atu3495 -0.5 -3.2 diguanylate cyclase compare
Atu0601 -0.4 -2.6 oxidoreductase compare
Atu1788 -0.4 -3.1 transcriptional regulator, GntR family compare
Atu4226 -0.4 -3.3 transcriptional regulator compare
Atu1737 -0.4 -0.9 hypothetical protein compare
Atu1592 -0.4 -1.8 hypothetical protein compare
Atu3572 -0.4 -3.0 transcriptional regulator compare
Atu0538 -0.4 -1.6 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Sucrose in Agrobacterium fabrum C58

For carbon source Sucrose across organisms