Experiment set7IT014 for Agrobacterium fabrum C58

Compare to:

Beta-Lactose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1308 -7.0 -4.8 aspartate carbamoyl transferase catalytic subunit compare
Atu2040 -6.7 -6.5 phosphoserine phosphatase compare
Atu1307 -6.7 -4.6 dihydroorotase compare
Atu3707 -6.6 -4.6 phosphoserine aminotransferase compare
Atu2709 -6.6 -18.6 3-isopropylmalate dehydratase, large subunit compare
Atu2289 -6.6 -19.5 anthranilate synthase component I and II compare
Atu1750 -6.5 -5.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu0432 -6.5 -9.9 O-succinylhomoserine sulfhydrylase compare
Atu0038 -6.4 -6.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1075 -6.4 -7.6 amidophosphoribosyltransferase compare
Atu0679 -6.3 -6.8 ATP phosphoribosyltransferase compare
Atu2036 -6.3 -18.6 acetolactate synthase III, large subunit compare
Atu0017 -6.2 -4.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2650 -6.2 -15.0 glycerol-3-phosphate dehydrogenase compare
Atu1687 -6.2 -11.9 anthranilate phosphoribosyltransferase compare
Atu0099 -6.1 -13.0 prephenate dehydratase compare
Atu2726 -6.1 -24.1 pyruvate carboxylase compare
Atu2791 -6.1 -10.9 3-isopropylmalate dehydrogenase compare
Atu2264 -6.0 -16.0 2-isopropylmalate synthase compare
Atu2155 -5.9 -22.8 methionine synthase compare
Atu1844 -5.7 -5.5 Phosphoribosylformylglycinamidine synthetase compare
Atu0678 -5.7 -6.8 histidyl-tRNA synthetase compare
Atu1141 -5.7 -9.5 Phosphoribosylglycinamide synthetase compare
Atu1588 -5.6 -13.5 homoserine dehydrogenase compare
Atu0400 -5.6 -3.8 orotate phosphoribosyltransferase compare
Atu1845 -5.5 -6.3 phosphoribosylformylglycinamidine synthase I compare
Atu1205 -5.5 -17.0 threonine dehydratase compare
Atu3754 -5.4 -9.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3784 -5.3 -26.7 glutamate synthase large subunit compare
Atu3706 -5.3 -11.9 D-3-phosphoglycerate dehydrogenase compare
Atu3783 -5.3 -17.8 glutamate synthase subunit beta compare
Atu0537 -5.3 -8.9 histidinol dehydrogenase compare
Atu1688 -5.3 -8.1 indole-3-glycerol-phosphate synthase compare
Atu0041 -5.3 -3.6 glutamine amidotransferase compare
Atu3885 -5.2 -10.3 inositol monophosphatase compare
Atu3755 -5.2 -7.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2747 -5.1 -12.5 hypothetical protein compare
Atu0647 -5.1 -8.5 phosphoribosylamine--glycine ligase compare
Atu1850 -5.0 -6.8 phosphoribosylformylglycinamidine synthetase II compare
Atu1140 -4.8 -5.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0486 -4.8 -6.6 dihydroorotate dehydrogenase compare
Atu3151 -4.8 -8.9 sugar ABC transporter substrate-binding protein conserved
Atu2790 -4.8 -4.0 3-isopropylmalate dehydratase, small subunit compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0346 -4.7 -3.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0298 -4.6 -6.3 orotidine 5 compare
Atu2718 -4.6 -10.2 homoserine O-succinyltransferase compare
Atu0043 -4.5 -4.4 imidazoleglycerol-phosphate dehydratase compare
Atu2274 -4.3 -11.4 cation efflux system protein compare
Atu3147 -4.3 -19.0 oxidoreductase compare
Atu3150 -4.1 -8.7 sugar ABC transporter permease conserved
Atu3152 -3.9 -10.0 AraC family transcriptional regulator compare
Atu3149 -3.8 -12.2 sugar ABC transporter permease compare
Atu3469 -3.7 -4.4 phosphoglyceromutase compare
Atu0399 -3.7 -7.1 dihydroorotase compare
Atu0590 -3.7 -11.0 transcriptional regulator repressor compare
Atu3148 -3.7 -12.1 sugar ABC transporter ATPase conserved
Atu3347 -3.7 -14.3 hypothetical protein compare
Atu1685 -3.7 -2.2 hypothetical protein compare
Atu2015 -3.6 -17.3 aminotransferase compare
Atu1589 -3.6 -7.4 aminotransferase, class I compare
Atu2123 -3.6 -9.5 methylenetetrahydrofolate reductase compare
Atu1456 -3.6 -16.2 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0040 -3.5 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3739 -3.5 -4.3 phosphoglycerate kinase compare
Atu1454 -3.5 -8.8 siroheme synthase compare
Atu6098 -3.4 -1.4 transcriptional regulator, HTH family compare
Atu1359 -3.4 -2.0 dnaK deletion suppressor protein compare
Atu1686 -3.3 -19.1 peptidyl-prolyl cis-trans isomerse D compare
Atu3348 -3.3 -9.4 hypothetical protein compare
Atu0184 -3.2 -4.2 glucokinase compare
Atu0641 -3.1 -5.8 hypothetical protein compare
Atu1030 -3.0 -2.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3483 -3.0 -6.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2548 -2.7 -14.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3482 -2.7 -7.5 pantoate--beta-alanine ligase compare
Atu1113 -2.4 -9.2 dehydrogenase compare
Atu2209 -2.4 -5.1 pyrroline-5-carboxylate reductase compare
Atu1446 -2.4 -3.0 two component response regulator compare
Atu1455 -2.4 -4.2 hypothetical protein compare
Atu1620 -2.4 -11.8 triosephosphate isomerase compare
Atu3731 -2.4 -8.5 5-formyltetrahydrofolate cyclo-ligase compare
Atu0185 -2.3 -2.7 methylglyoxal synthase compare
Atu0598 -2.3 -12.2 phosphogluconate dehydratase compare
Atu2684 -2.2 -2.5 hypothetical protein compare
Atu0029 -2.2 -6.8 S-adenosylhomocysteine hydrolase compare
Atu4711 -2.2 -9.6 two component sensor kinase compare
Atu0030 -1.9 -2.7 phosphocarrier protein HPr compare
Atu1462 -1.9 -11.6 glycine cleavage system protein P2 compare
Atu1463 -1.9 -7.4 glycine cleavage system component H compare
Atu0422 -1.8 -3.3 ABC transporter, membrane spanning protein compare
Atu1445 -1.8 -4.5 two component sensor kinase compare
Atu3350 -1.6 -9.0 ABC transporter permease compare
Atu1457 -1.6 -1.8 hypothetical protein compare
Atu0769 -1.6 -1.9 protoheme IX farnesyltransferase compare
Atu3352 -1.5 -8.7 sugar ABC transporter substrate-binding protein compare
Atu1464 -1.5 -5.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu1028 -1.5 -3.2 hypothetical protein compare
Atu3349 -1.5 -6.3 ABC transporter permease compare
Atu3351 -1.5 -7.3 sugar ABC transporter permease compare
Atu0606 -1.4 -3.5 hypothetical protein compare
Atu0141 -1.3 -2.3 cytochrome O ubiquinol oxidase subunit I compare
Atu1103 -1.3 -4.6 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0047 -1.3 -9.3 malate synthase G compare
Atu2335 -1.3 -2.6 hypothetical protein compare
Atu4176 -1.2 -4.3 hypothetical protein compare
Atu1566 -1.2 -1.7 hypothetical protein compare
Atu1546 -1.2 -4.4 transcriptional regulator, MerR family compare
Atu4773 -1.1 -1.8 two component response regulator compare
Atu2787 -1.1 -1.3 hypothetical protein compare
Atu8115 -1.1 -3.5 Hypothetical Protein compare
Atu1077 -1.1 -2.8 DNA repair protein compare
Atu3598 -1.1 -2.4 thiol:disulfide interchange protein compare
Atu0434 -1.1 -2.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -1.1 -3.5 ABC transporter, membrane spanning protein (peptide) compare
Atu0188 -1.1 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0031 -1.1 -1.3 PTS system, IIA component compare
Atu4665 -1.0 -6.3 alpha-galactosidase compare
Atu1327 -1.0 -2.4 NADH-ubiquinone oxidoreductase compare
Atu6114 -1.0 -1.8 hypothetical protein compare
Atu1163 -1.0 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2376 -1.0 -0.9 hypothetical protein compare
Atu0809 -1.0 -2.0 hypothetical protein compare
Atu0803 -1.0 -7.1 pyruvate,orthophosphate dikinase compare
Atu4161 -1.0 -2.1 hypothetical protein compare
Atu1019 -0.9 -2.9 hypothetical protein compare
Atu3740 -0.9 -5.4 fructose bisphosphate aldolase compare
Atu3219 -0.9 -6.8 dihydroxy-acid dehydratase compare
Atu0535 -0.9 -2.8 hypothetical protein compare
Atu0536 -0.9 -3.6 hypothetical protein compare
Atu5125 -0.9 -3.5 GntR family transcriptional regulator compare
Atu2205 -0.9 -4.3 transcriptional regulator, MarR family compare
Atu0190 -0.9 -5.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0565 -0.9 -2.6 hypothetical protein compare
Atu1503 -0.8 -1.3 hypothetical protein compare
Atu8054 -0.8 -0.7 hypothetical protein compare
Atu3763 -0.8 -1.5 hypothetical protein compare
Atu3732 -0.8 -4.5 hemolysin compare
Atu2270 -0.8 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu0895 -0.8 -2.1 ABC transporter, substrate binding protein compare
Atu4485 -0.8 -4.8 beta-glucosidase conserved
Atu1677 -0.8 -3.7 queuine tRNA-ribosyltransferase compare
Atu0354 -0.7 -1.2 ferric uptake regulator compare
Atu2238 -0.7 -3.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0300 -0.7 -3.3 methyltransferase compare
Atu0142 -0.7 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu5107 -0.7 -2.5 hypothetical protein compare
Atu0703 -0.7 -2.5 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0205 -0.7 -5.0 methylmalonate-semialdehyde dehydrogenase compare
Atu0086 -0.7 -0.8 ribosome-binding factor A compare
Atu0062 -0.7 -4.4 transcriptional regulator, ROK family compare
Atu0636 -0.7 -3.1 hypothetical protein compare
Atu3613 -0.7 -4.0 hypothetical protein compare
Atu2745 -0.7 -5.3 acetyl-coenzyme A synthetase compare
Atu1286 -0.7 -2.2 hypothetical protein compare
Atu3963 -0.7 -3.5 GntR family transcriptional regulator compare
Atu4502 -0.7 -3.7 cobalamin synthesis protein compare
Atu0926 -0.7 -4.0 hypothetical protein compare
Atu2657 -0.7 -1.9 hypothetical protein compare
Atu2591 -0.7 -4.3 glucosyltransferase compare
Atu3750 -0.7 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu1774 -0.7 -3.1 ABC transporter, substrate binding protein (peptide) compare
Atu2694 -0.6 -1.4 hypothetical protein compare
Atu4505 -0.6 -3.5 LacI family transcriptional regulator compare
Atu3727 -0.6 -3.0 hypothetical protein compare
Atu0973 -0.6 -3.0 cycH protein compare
Atu1074 -0.6 -4.5 NAD/NADP dependent oxidoreductase compare
Atu8053 -0.6 -2.1 hypothetical protein compare
Atu1439 -0.6 -2.2 hypothetical protein compare
Atu4514 -0.6 -3.2 RpiR family transcriptional regulator compare
Atu1149 -0.6 -1.2 adenylate cyclase compare
Atu1952 -0.6 -1.4 hypothetical protein compare
Atu0368 -0.6 -3.1 tRNA pseudouridine synthase I compare
Atu1344 -0.6 -1.2 hypothetical protein compare
Atu8032 -0.6 -2.2 hypothetical protein compare
Atu3730 -0.6 -1.3 hypothetical protein compare
Atu4149 -0.6 -4.4 UDP-glucose 6-dehydrogenase compare
Atu1373 -0.6 -4.2 hypothetical protein compare
Atu4166 -0.6 -1.7 UDP-glucose 4-epimerase compare
Atu3578 -0.6 -2.8 glycerol-3-phosphate dehydrogenase compare
Atu0886 -0.6 -1.1 hypothetical protein compare
Atu4617 -0.6 -4.4 dTDP-D-glucose-4,6-dehydratase compare
Atu1573 -0.6 -0.7 hypothetical protein compare
Atu5095 -0.6 -2.1 hypothetical protein compare
Atu5511 -0.6 -1.4 hypothetical protein compare
Atu0291 -0.6 -3.1 hypothetical protein compare
Atu1678 -0.6 -2.5 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu0479 -0.6 -2.8 ABC transporter, substrate binding protein (amino acid) compare
Atu1722 -0.6 -1.7 hypothetical protein compare
Atu1139 -0.6 -2.5 hypothetical protein compare
Atu2770 -0.6 -2.4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2592 -0.6 -2.5 hypothetical protein compare
Atu4613 -0.6 -4.1 glycosyltransferase compare
Atu0777 -0.5 -0.7 hypothetical protein compare
Atu0953 -0.5 -0.9 hypothetical protein compare
Atu4106 -0.5 -2.4 hypothetical protein compare
Atu4686 -0.5 -1.3 hypothetical protein compare
Atu4346 -0.5 -2.7 hypothetical protein compare
Atu3697 -0.5 -2.1 ATP-dependent protease LA 2 compare
Atu0768 -0.5 -3.7 cytochrome-c oxidase chain I compare


Specific Phenotypes

For 14 genes in this experiment

For carbon source Beta-Lactose in Agrobacterium fabrum C58

For carbon source Beta-Lactose across organisms