Experiment set7IT013 for Agrobacterium fabrum C58

Compare to:

Maltitol carbon source

200 most important genes:

  gene name fitness t score description  
Atu1850 -7.6 -5.3 phosphoribosylformylglycinamidine synthetase II compare
Atu0679 -6.9 -8.2 ATP phosphoribosyltransferase compare
Atu2264 -6.8 -14.4 2-isopropylmalate synthase compare
Atu1307 -6.7 -4.6 dihydroorotase compare
Atu1687 -6.6 -11.9 anthranilate phosphoribosyltransferase compare
Atu3706 -6.5 -10.0 D-3-phosphoglycerate dehydrogenase compare
Atu0537 -6.4 -6.3 histidinol dehydrogenase compare
Atu0017 -6.3 -4.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2709 -6.3 -20.5 3-isopropylmalate dehydratase, large subunit compare
Atu2036 -6.2 -17.5 acetolactate synthase III, large subunit compare
Atu2726 -6.2 -23.2 pyruvate carboxylase compare
Atu0432 -6.1 -12.3 O-succinylhomoserine sulfhydrylase compare
Atu3754 -6.0 -9.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1688 -6.0 -5.8 indole-3-glycerol-phosphate synthase compare
Atu2791 -5.9 -10.2 3-isopropylmalate dehydrogenase compare
Atu2289 -5.9 -19.1 anthranilate synthase component I and II compare
Atu1140 -5.8 -5.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2040 -5.8 -7.9 phosphoserine phosphatase compare
Atu0043 -5.7 -3.9 imidazoleglycerol-phosphate dehydratase compare
Atu0678 -5.7 -7.8 histidyl-tRNA synthetase compare
Atu2790 -5.6 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu0099 -5.6 -13.7 prephenate dehydratase compare
Atu1844 -5.6 -4.5 Phosphoribosylformylglycinamidine synthetase compare
Atu1205 -5.5 -12.7 threonine dehydratase compare
Atu1588 -5.4 -13.1 homoserine dehydrogenase compare
Atu0038 -5.4 -6.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2155 -5.3 -23.9 methionine synthase compare
Atu0041 -5.3 -3.7 glutamine amidotransferase compare
Atu1141 -5.3 -8.1 Phosphoribosylglycinamide synthetase compare
Atu0486 -5.3 -6.3 dihydroorotate dehydrogenase compare
Atu1030 -5.3 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1845 -5.2 -5.1 phosphoribosylformylglycinamidine synthase I compare
Atu1075 -5.2 -10.2 amidophosphoribosyltransferase compare
Atu1446 -5.2 -3.6 two component response regulator compare
Atu3469 -5.2 -3.6 phosphoglyceromutase compare
Atu3707 -5.1 -4.9 phosphoserine aminotransferase compare
Atu2718 -5.1 -10.3 homoserine O-succinyltransferase compare
Atu3783 -5.0 -21.9 glutamate synthase subunit beta compare
Atu0647 -5.0 -8.3 phosphoribosylamine--glycine ligase compare
Atu2274 -4.9 -10.8 cation efflux system protein compare
Atu3784 -4.9 -27.4 glutamate synthase large subunit compare
Atu1750 -4.9 -6.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0399 -4.8 -4.6 dihydroorotase compare
Atu3885 -4.7 -13.0 inositol monophosphatase compare
Atu1308 -4.6 -7.0 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -4.6 -5.4 orotate phosphoribosyltransferase compare
Atu0298 -4.5 -6.8 orotidine 5 compare
Atu2650 -4.4 -14.4 glycerol-3-phosphate dehydrogenase compare
Atu3739 -4.3 -4.6 phosphoglycerate kinase compare
Atu3343 -4.2 -10.6 trehalose utilization-like protein conserved
Atu3755 -4.2 -7.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2747 -4.0 -13.1 hypothetical protein compare
Atu0040 -3.6 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3342 -3.6 -10.5 trehalose utilization-like protein compare
Atu2015 -3.5 -12.7 aminotransferase compare
Atu2548 -3.0 -16.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3482 -2.8 -9.5 pantoate--beta-alanine ligase compare
Atu1686 -2.7 -16.4 peptidyl-prolyl cis-trans isomerse D compare
Atu1456 -2.7 -12.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0401 -2.5 -7.0 fructokinase compare
Atu1454 -2.5 -7.6 siroheme synthase compare
Atu0598 -2.5 -11.1 phosphogluconate dehydratase compare
Atu3338 -2.4 -15.6 trehalose/maltose ABC transporter substrate-binding protein conserved
Atu0641 -2.4 -5.4 hypothetical protein compare
Atu3340 -2.3 -11.4 trehalose/maltose ABC transporter permease conserved
Atu1589 -2.3 -7.2 aminotransferase, class I compare
Atu3483 -2.3 -5.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1163 -2.2 -3.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0346 -2.2 -3.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2123 -2.2 -9.6 methylenetetrahydrofolate reductase compare
Atu3339 -2.1 -7.8 trehalose/maltose ABC transporter permease conserved
Atu3341 -2.0 -8.3 trehalose/maltose ABC transporter ATPase conserved
Atu0185 -2.0 -3.7 methylglyoxal synthase compare
Atu0031 -1.9 -1.8 PTS system, IIA component compare
Atu1620 -1.9 -8.5 triosephosphate isomerase compare
Atu3731 -1.9 -7.3 5-formyltetrahydrofolate cyclo-ligase compare
Atu0421 -1.8 -1.9 ABC transporter, membrane spanning protein compare
Atu1464 -1.8 -8.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu4318 -1.7 -9.8 xylitol dehydrogenase compare
Atu4711 -1.7 -6.0 two component sensor kinase compare
Atu1462 -1.6 -9.9 glycine cleavage system protein P2 compare
Atu4075 -1.5 -6.5 glycogen synthase compare
Atu0332 -1.4 -9.4 RNA polymerase sigma-54 factor compare
Atu2125 -1.4 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu0422 -1.4 -2.4 ABC transporter, membrane spanning protein compare
Atu2163 -1.4 -2.0 hypothetical protein compare
Atu1359 -1.3 -1.3 dnaK deletion suppressor protein compare
Atu1455 -1.3 -3.3 hypothetical protein compare
Atu0876 -1.2 -2.2 superoxide dismutase compare
Atu1463 -1.2 -3.4 glycine cleavage system component H compare
Atu1457 -1.2 -1.4 hypothetical protein compare
Atu0029 -1.2 -4.7 S-adenosylhomocysteine hydrolase compare
Atu3730 -1.2 -1.4 hypothetical protein compare
Atu0184 -1.2 -1.5 glucokinase compare
Atu1445 -1.1 -2.8 two component sensor kinase compare
Atu1685 -1.1 -1.3 hypothetical protein compare
Atu4618 -1.1 -8.2 dTDP-rhamnose-3,5-epimerase compare
Atu0434 -1.1 -1.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2728 -1.1 -4.4 beta (1-->2) glucan export ATP-binding protein compare
Atu8115 -1.1 -3.5 Hypothetical Protein compare
Atu4617 -1.1 -7.1 dTDP-D-glucose-4,6-dehydratase compare
Atu4613 -1.1 -7.4 glycosyltransferase compare
Atu0361 -1.0 -2.8 transcriptional regulator compare
Atu0590 -1.0 -5.9 transcriptional regulator repressor compare
Atu0030 -1.0 -1.8 phosphocarrier protein HPr compare
Atu2209 -1.0 -3.9 pyrroline-5-carboxylate reductase compare
Atu2237 -1.0 -3.6 cytochrome c1 compare
Atu4614 -1.0 -5.6 glycosyltransferase compare
Atu3712 -1.0 -1.1 hypothetical protein compare
Atu0188 -1.0 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1327 -0.9 -2.5 NADH-ubiquinone oxidoreductase compare
Atu4615 -0.9 -7.1 glucose-1-phosphate thymidylyltransferase compare
Atu0189 -0.9 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu2554 -0.9 -1.8 lysyl-tRNA synthetase compare
Atu4346 -0.9 -3.4 hypothetical protein compare
Atu1604 -0.9 -7.1 poly-beta-hydroxybutyrate synthase compare
Atu0769 -0.9 -1.0 protoheme IX farnesyltransferase compare
Atu3121 -0.9 -1.2 cold shock protein compare
Atu1546 -0.8 -3.7 transcriptional regulator, MerR family compare
Atu2183 -0.8 -5.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0062 -0.8 -4.7 transcriptional regulator, ROK family compare
Atu0103 -0.8 -5.9 penicillin-binding protein compare
Atu2205 -0.8 -2.2 transcriptional regulator, MarR family compare
Atu4616 -0.8 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu1602 -0.8 -3.4 transcriptional activator, Crp family compare
Atu2555 -0.8 -2.6 L-lysine 2,3-aminomutase compare
Atu4540 -0.8 -1.9 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0971 -0.8 -3.1 two component sensor kinase compare
Atu1774 -0.8 -4.6 ABC transporter, substrate binding protein (peptide) compare
Atu0966 -0.7 -1.4 hypothetical protein compare
Atu6114 -0.7 -2.1 hypothetical protein compare
Atu0976 -0.7 -2.2 cycL protein compare
Atu0640 -0.7 -1.0 hypothetical protein compare
Atu4317 -0.7 -2.2 TetR family transcriptional regulator compare
Atu4161 -0.7 -1.6 hypothetical protein compare
Atu4187 -0.7 -1.2 tRNA-Met compare
Atu0687 -0.7 -1.1 hypothetical protein compare
Atu4477 -0.7 -3.8 TetR family transcriptional regulator compare
Atu3008 -0.7 -0.7 hypothetical protein compare
Atu0722 -0.7 -2.2 hypothetical protein compare
Atu2063 -0.7 -1.6 hypothetical protein compare
Atu4897 -0.7 -1.0 hypothetical protein compare
Atu0086 -0.7 -0.8 ribosome-binding factor A compare
Atu4763 -0.7 -2.3 AsnC family transcriptional regulator compare
Atu1223 -0.6 -1.2 hypothetical protein compare
Atu3387 -0.6 -1.6 sigma factor compare
Atu2456 -0.6 -2.7 lactoylglutathione lyase compare
Atu3311 -0.6 -5.3 phosphomannose isomerase compare
Atu1573 -0.6 -0.9 hypothetical protein compare
Atu1714 -0.6 -1.2 exonuclease III compare
Atu8052 -0.6 -0.8 hypothetical protein compare
Atu3353 -0.6 -4.5 mannose-1-phosphate guanylyltransferase compare
Atu1074 -0.6 -4.7 NAD/NADP dependent oxidoreductase compare
Atu3963 -0.6 -3.5 GntR family transcriptional regulator compare
Atu0190 -0.6 -3.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu5125 -0.6 -2.6 GntR family transcriptional regulator compare
Atu2192 -0.6 -1.1 hypothetical protein compare
Atu4608 -0.6 -4.7 hypothetical protein compare
Atu2803 -0.6 -2.1 Cobalamin biosynthesis associated protein compare
Atu2238 -0.6 -3.2 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4053 -0.6 -1.1 succinoglycan biosynthesis protein compare
Atu2522 -0.6 -4.2 agrobacterium chromosomal virulence protein B compare
Atu4061 -0.6 -2.2 exopolysaccharide production repressor protein compare
Atu6040 -0.6 -2.2 conjugal transfer protein compare
Atu0142 -0.6 -1.6 cytochrome o ubiquinol oxidase subunit II compare
Atu0152 -0.5 -1.1 hypothetical protein compare
Atu4093 -0.5 -1.9 hypothetical protein compare
Atu0535 -0.5 -2.3 hypothetical protein compare
Atu1566 -0.5 -0.9 hypothetical protein compare
Atu4156 -0.5 -3.2 aliphatic sulfonate ABC transporter ATPase compare
Atu1537 -0.5 -3.5 cytochrome-c oxidase, FixN chain compare
Atu1528 -0.5 -3.7 nitrogen fixation protein FixI compare
Atu1495 -0.5 -2.0 hypothetical protein compare
Atu3910 -0.5 -1.4 LamB/YcsF family protein compare
Atu3518 -0.5 -3.4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3598 -0.5 -0.8 thiol:disulfide interchange protein compare
Atu1028 -0.5 -1.0 hypothetical protein compare
Atu0837 -0.5 -1.4 transcriptional regulator, MarR family compare
Atu0768 -0.5 -3.4 cytochrome-c oxidase chain I compare
Atu6126 -0.5 -2.2 conjugal transfer protein, Dtr system compare
Atu2191 -0.5 -2.0 transcriptional regulator, LysR family compare
Atu4609 -0.5 -3.5 glycosyltransferase compare
Atu1286 -0.5 -2.4 hypothetical protein compare
Atu2113 -0.5 -1.4 N-acetylmuramoyl-L-alanine amidase compare
Atu3727 -0.5 -1.8 hypothetical protein compare
Atu1530 -0.5 -2.9 nitrogen fixation protein FixG compare
Atu1323 -0.5 -1.4 hypothetical protein compare
Atu0368 -0.5 -2.0 tRNA pseudouridine synthase I compare
Atu4097 -0.5 -2.7 L-aspartate oxidase compare
Atu1527 -0.5 -2.4 nitrogen fixation protein FixS compare
Atu2719 -0.5 -3.2 aldose epimerase compare
Atu1701 -0.5 -1.3 protein-L-isoaspartate O-methyltransferase compare
Atu0245 -0.5 -3.2 transcriptional regulator compare
Atu3517 -0.5 -2.9 acetyltransferase compare
Atu5146 -0.5 -0.8 hypothetical protein compare
Atu0230 -0.5 -1.2 hypothetical protein compare
Atu1364 -0.5 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4232 -0.5 -2.7 GntR family transcriptional regulator compare
Atu0201 -0.5 -1.3 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Maltitol in Agrobacterium fabrum C58

For carbon source Maltitol across organisms