Experiment set7IT010 for Agrobacterium fabrum C58

Compare to:

Mannobiose carbon source

200 most important genes:

  gene name fitness t score description  
Atu3707 -5.5 -4.5 phosphoserine aminotransferase compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu0017 -5.1 -5.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1030 -5.1 -3.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1446 -5.0 -3.4 two component response regulator compare
Atu1359 -4.7 -1.9 dnaK deletion suppressor protein compare
Atu0678 -4.4 -9.7 histidyl-tRNA synthetase compare
Atu3706 -4.2 -13.5 D-3-phosphoglycerate dehydrogenase compare
Atu1844 -4.2 -5.0 Phosphoribosylformylglycinamidine synthetase compare
Atu0399 -4.2 -6.3 dihydroorotase compare
Atu2036 -4.1 -16.6 acetolactate synthase III, large subunit compare
Atu2040 -4.1 -8.5 phosphoserine phosphatase compare
Atu0099 -3.9 -17.7 prephenate dehydratase compare
Atu0647 -3.9 -8.6 phosphoribosylamine--glycine ligase compare
Atu2289 -3.8 -19.4 anthranilate synthase component I and II compare
Atu2718 -3.8 -11.3 homoserine O-succinyltransferase compare
Atu0537 -3.7 -9.9 histidinol dehydrogenase compare
Atu2155 -3.7 -19.3 methionine synthase compare
Atu3754 -3.6 -6.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0039 -3.6 -2.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu1687 -3.6 -14.3 anthranilate phosphoribosyltransferase compare
Atu0346 -3.5 -6.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2264 -3.5 -17.2 2-isopropylmalate synthase compare
Atu0040 -3.5 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2726 -3.5 -20.2 pyruvate carboxylase compare
Atu1845 -3.5 -7.7 phosphoribosylformylglycinamidine synthase I compare
Atu0432 -3.5 -9.7 O-succinylhomoserine sulfhydrylase compare
Atu0679 -3.4 -6.4 ATP phosphoribosyltransferase compare
Atu0486 -3.4 -4.8 dihydroorotate dehydrogenase compare
Atu0401 -3.4 -6.5 fructokinase compare
Atu1141 -3.4 -10.4 Phosphoribosylglycinamide synthetase compare
Atu2791 -3.4 -10.3 3-isopropylmalate dehydrogenase compare
Atu1688 -3.4 -9.6 indole-3-glycerol-phosphate synthase compare
Atu0038 -3.4 -4.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2709 -3.4 -18.2 3-isopropylmalate dehydratase, large subunit compare
Atu1850 -3.3 -4.8 phosphoribosylformylglycinamidine synthetase II compare
Atu1750 -3.3 -9.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu1588 -3.3 -10.6 homoserine dehydrogenase compare
Atu1140 -3.3 -7.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2650 -3.2 -13.1 glycerol-3-phosphate dehydrogenase compare
Atu0590 -3.2 -13.4 transcriptional regulator repressor compare
Atu3885 -3.1 -10.0 inositol monophosphatase compare
Atu3469 -3.1 -4.6 phosphoglyceromutase compare
Atu0043 -3.1 -3.8 imidazoleglycerol-phosphate dehydratase compare
Atu1205 -3.0 -14.3 threonine dehydratase compare
Atu2156 -2.8 -7.5 hypothetical protein compare
Atu0400 -2.8 -5.3 orotate phosphoribosyltransferase compare
Atu2790 -2.8 -3.3 3-isopropylmalate dehydratase, small subunit compare
Atu1075 -2.7 -7.9 amidophosphoribosyltransferase compare
Atu0593 -2.6 -11.3 ABC transporter, membrane spanning protein compare
Atu2747 -2.6 -15.0 hypothetical protein compare
Atu0591 -2.6 -15.9 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0298 -2.6 -7.4 orotidine 5 compare
Atu4773 -2.4 -1.9 two component response regulator compare
Atu3783 -2.4 -14.5 glutamate synthase subunit beta compare
Atu3351 -2.4 -10.4 sugar ABC transporter permease conserved
Atu2123 -2.4 -6.1 methylenetetrahydrofolate reductase compare
Atu3784 -2.3 -18.6 glutamate synthase large subunit compare
Atu1307 -2.3 -4.0 dihydroorotase compare
Atu1456 -2.3 -9.9 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3739 -2.3 -3.7 phosphoglycerate kinase compare
Atu3755 -2.3 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0592 -2.3 -8.3 ABC transporter, membrane spanning protein compare
Atu3348 -2.1 -8.1 hypothetical protein compare
Atu3352 -2.1 -15.0 sugar ABC transporter substrate-binding protein conserved
Atu1308 -2.1 -4.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1523 -2.1 -13.0 beta-mannosidase precursor conserved
Atu0641 -2.0 -5.0 hypothetical protein compare
Atu3350 -2.0 -12.1 ABC transporter permease conserved
Atu2274 -1.9 -8.2 cation efflux system protein compare
Atu3347 -1.9 -8.4 hypothetical protein compare
Atu1454 -1.9 -8.6 siroheme synthase compare
Atu3349 -1.8 -9.4 ABC transporter permease conserved
Atu2548 -1.8 -13.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1437 -1.8 -8.3 hypothetical protein compare
Atu3483 -1.7 -6.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2015 -1.7 -9.8 aminotransferase compare
Atu1810 -1.7 -1.8 hypothetical protein compare
Atu4711 -1.7 -5.0 two component sensor kinase compare
Atu3482 -1.6 -9.1 pantoate--beta-alanine ligase compare
Atu1589 -1.6 -4.6 aminotransferase, class I compare
Atu1686 -1.6 -10.6 peptidyl-prolyl cis-trans isomerse D compare
Atu1455 -1.6 -2.9 hypothetical protein compare
Atu6098 -1.6 -1.0 transcriptional regulator, HTH family compare
Atu3731 -1.6 -7.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu1438 -1.5 -4.8 transcriptional regulator, AraC family compare
Atu1327 -1.4 -3.6 NADH-ubiquinone oxidoreductase compare
Atu0361 -1.4 -4.4 transcriptional regulator compare
Atu2684 -1.4 -1.9 hypothetical protein compare
Atu0876 -1.4 -2.1 superoxide dismutase compare
Atu0031 -1.3 -1.4 PTS system, IIA component compare
Atu0184 -1.3 -2.4 glucokinase compare
Atu0029 -1.3 -5.9 S-adenosylhomocysteine hydrolase compare
Atu2787 -1.2 -1.6 hypothetical protein compare
Atu4685 -1.2 -5.9 LacI family transcriptional regulator compare
Atu1503 -1.2 -1.5 hypothetical protein compare
Atu4618 -1.1 -7.7 dTDP-rhamnose-3,5-epimerase compare
Atu4614 -1.1 -6.5 glycosyltransferase compare
Atu2113 -1.1 -3.7 N-acetylmuramoyl-L-alanine amidase compare
Atu1462 -1.1 -7.6 glycine cleavage system protein P2 compare
Atu3730 -1.1 -1.9 hypothetical protein compare
Atu1685 -1.1 -1.3 hypothetical protein compare
Atu0062 -1.1 -6.4 transcriptional regulator, ROK family compare
Atu2554 -1.1 -2.3 lysyl-tRNA synthetase compare
Atu4613 -1.1 -8.1 glycosyltransferase compare
Atu4161 -1.1 -1.5 hypothetical protein compare
Atu3337 -1.1 -5.9 LacI family transcriptional regulator compare
Atu1163 -1.1 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4166 -1.1 -2.5 UDP-glucose 4-epimerase compare
Atu2209 -1.1 -3.1 pyrroline-5-carboxylate reductase compare
Atu1573 -1.1 -1.5 hypothetical protein compare
Atu4615 -1.1 -6.2 glucose-1-phosphate thymidylyltransferase compare
Atu0030 -1.0 -1.8 phosphocarrier protein HPr compare
Atu4317 -1.0 -2.8 TetR family transcriptional regulator compare
Atu2183 -1.0 -6.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0291 -1.0 -6.3 hypothetical protein compare
Atu4617 -1.0 -6.0 dTDP-D-glucose-4,6-dehydratase compare
Atu0595 -1.0 -5.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0047 -0.9 -6.7 malate synthase G compare
Atu2238 -0.9 -4.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1891 -0.9 -2.3 cobalamin biosynthesis protein compare
Atu5125 -0.9 -4.0 GntR family transcriptional regulator compare
Atu0803 -0.9 -7.2 pyruvate,orthophosphate dikinase compare
Atu0941 -0.9 -0.9 hypothetical protein compare
Atu1457 -0.9 -1.7 hypothetical protein compare
Atu0598 -0.9 -4.6 phosphogluconate dehydratase compare
Atu0536 -0.9 -4.3 hypothetical protein compare
Atu1463 -0.9 -3.2 glycine cleavage system component H compare
Atu0770 -0.9 -4.3 cytochrome C oxidase assembly protein compare
Atu3353 -0.9 -5.1 mannose-1-phosphate guanylyltransferase compare
Atu1464 -0.9 -4.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu0189 -0.9 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu3311 -0.9 -6.8 phosphomannose isomerase compare
Atu0912 -0.8 -1.4 Na+/H+ antiporter compare
Atu1570 -0.8 -0.9 hypothetical protein compare
Atu3963 -0.8 -5.5 GntR family transcriptional regulator compare
Atu3898 -0.8 -3.5 DeoR family transcriptional regulator compare
Atu1219 -0.8 -1.2 hypothetical protein compare
Atu3598 -0.8 -1.8 thiol:disulfide interchange protein compare
Atu1774 -0.8 -4.0 ABC transporter, substrate binding protein (peptide) compare
Atu2441 -0.8 -1.5 RNA methylase compare
Atu8176 -0.8 -1.9 hypothetical protein compare
Atu1074 -0.8 -4.6 NAD/NADP dependent oxidoreductase compare
Atu1445 -0.8 -3.6 two component sensor kinase compare
Atu2237 -0.8 -2.9 cytochrome c1 compare
Atu0769 -0.8 -1.2 protoheme IX farnesyltransferase compare
Atu1286 -0.8 -2.3 hypothetical protein compare
Atu0190 -0.7 -4.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2532 -0.7 -2.9 transcriptional regulator, MarR family compare
Atu0718 -0.7 -1.8 hypothetical protein compare
Atu0846 -0.7 -1.5 transcriptional regulator, MarR family compare
Atu2821 -0.7 -2.7 transcriptional regulator, GntR family compare
Atu1439 -0.7 -1.5 hypothetical protein compare
Atu2239 -0.7 -1.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu0565 -0.7 -3.3 hypothetical protein compare
Atu0842 -0.7 -1.5 hypothetical protein compare
Atu3577 -0.7 -4.7 transcriptional regulator compare
Atu0188 -0.7 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0205 -0.7 -4.6 methylmalonate-semialdehyde dehydrogenase compare
Atu3727 -0.7 -3.0 hypothetical protein compare
Atu4576 -0.7 -4.6 ROK family transcriptional regulator compare
Atu0421 -0.7 -1.0 ABC transporter, membrane spanning protein compare
Atu3008 -0.7 -0.7 hypothetical protein compare
Atu1419 -0.7 -4.1 transcriptional regulator, GntR family compare
Atu4514 -0.7 -2.1 RpiR family transcriptional regulator compare
Atu1182 -0.6 -1.3 hypothetical protein compare
Atu2035 -0.6 -3.2 acetolactate synthase, small subunit compare
Atu2124 -0.6 -2.0 transcriptional regulator, ArsR family compare
Atu0768 -0.6 -4.3 cytochrome-c oxidase chain I compare
Atu0422 -0.6 -1.0 ABC transporter, membrane spanning protein compare
Atu1634 -0.6 -1.4 hypothetical protein compare
Atu0809 -0.6 -1.4 hypothetical protein compare
Atu1535 -0.6 -2.7 cytochrome c oxidase, FixQ chain compare
Atu0230 -0.6 -1.4 hypothetical protein compare
Atu4061 -0.6 -2.0 exopolysaccharide production repressor protein compare
Atu2376 -0.6 -0.4 hypothetical protein compare
Atu0939 -0.6 -1.9 PemI protein compare
Atu4406 -0.6 -1.4 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu0702 -0.6 -1.6 calcium-binding protein, regucalcin compare
Atu3750 -0.6 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu5045 -0.6 -1.1 hypothetical protein compare
Atu4502 -0.6 -2.9 cobalamin synthesis protein compare
Atu3740 -0.6 -3.7 fructose bisphosphate aldolase compare
Atu8115 -0.6 -3.1 Hypothetical Protein compare
Atu0357 -0.6 -2.8 phosphate starvation inducible protein compare
Atu0777 -0.6 -0.7 hypothetical protein compare
Atu3509 -0.6 -2.8 hypothetical protein compare
Atu0895 -0.6 -1.5 ABC transporter, substrate binding protein compare
Atu8158 -0.6 -1.3 hypothetical protein compare
Atu8191 -0.6 -1.3 hypothetical protein compare
Atu4446 -0.6 -4.2 hypothetical protein compare
Atu4232 -0.6 -3.0 GntR family transcriptional regulator compare
Atu3144 -0.6 -2.7 GntR family transcriptional regulator compare
Atu3496 -0.6 -1.7 hypothetical protein compare
Atu1677 -0.6 -2.2 queuine tRNA-ribosyltransferase compare
Atu2406 -0.6 -1.1 hypothetical protein compare
Atu3465 -0.6 -2.2 metallo-beta-lactamase superfamily protein compare
Atu4187 -0.6 -1.0 tRNA-Met compare
Atu0925 -0.6 -2.3 hypothetical protein compare
Atu1705 -0.5 -1.5 SEC-independent protein translocase protein compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source Mannobiose in Agrobacterium fabrum C58

For carbon source Mannobiose across organisms