Experiment set7IT008 for Agrobacterium fabrum C58

Compare to:

Lactulose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4896 +2.1 5.0 acetyltransferase compare
Atu4893 +1.5 6.8 hypothetical protein compare
Atu3011 +1.5 5.1 ArsR family transcriptional regulator compare
Atu3001 +1.5 3.9 hypothetical protein compare
Atu3013 +1.4 8.5 hypothetical protein compare
Atu3006 +1.4 6.1 hypothetical protein compare
Atu3009 +1.3 2.1 exopolysaccharide production protein compare
Atu3010 +1.3 8.9 hypothetical protein compare
Atu4892 +1.2 9.6 hypothetical protein compare
Atu3663 +1.2 2.4 hypothetical protein compare
Atu4897 +1.2 3.0 hypothetical protein compare
Atu8202 +1.2 3.5 hypothetical protein compare
Atu4888 +1.2 6.0 hypothetical protein compare
Atu4894 +1.2 8.5 transposase compare
Atu4887 +1.1 7.0 hypothetical protein compare
Atu3019 +1.1 6.9 hypothetical protein compare
Atu4882 +1.1 4.0 hypothetical protein compare
Atu3015 +1.1 5.1 hypothetical protein compare
Atu4875 +1.1 6.3 hypothetical protein compare
Atu3021 +1.1 7.8 sugar ABC transporter ATPase compare
Atu3012 +1.0 2.8 hypothetical protein compare
Atu1846 +1.0 2.4 hypothetical protein compare
Atu4884 +1.0 4.2 hypothetical protein compare
Atu3018 +1.0 3.9 hypothetical protein compare
Atu3008 +1.0 1.5 hypothetical protein compare
Atu4890 +1.0 2.5 IS426 transposase compare
Atu3016 +1.0 5.5 phosphoglyceromutase compare
Atu2057 +1.0 3.1 DNA helicase II compare
Atu4880 +0.9 6.8 AraC family transcriptional regulator compare
Atu3026 +0.9 5.7 short chain dehydrogenase compare
Atu3020 +0.9 6.0 GntR family transcriptional regulator compare
Atu5451 +0.9 1.8 hypothetical protein compare
Atu3023 +0.9 6.6 sugar ABC transporter permease compare
Atu4889 +0.9 4.4 hypothetical protein compare
Atu2017 +0.9 1.2 hypothetical protein compare
Atu4876 +0.9 7.4 oxidoreductase compare
Atu3014 +0.9 2.6 hypothetical protein compare
Atu3022 +0.9 5.5 sugar ABC transporter permease compare
Atu8052 +0.9 1.1 hypothetical protein compare
Atu4881 +0.9 4.4 hypothetical protein compare
Atu4879 +0.9 5.2 hypothetical protein compare
Atu3025 +0.8 7.0 oligo alginate lyase compare
Atu3028 +0.8 5.6 hypothetical protein compare
Atu4877 +0.8 5.4 short-chain dehydrogenase compare
Atu4870 +0.8 6.1 NADP-dependent quinone oxidoreductase compare
Atu1522 +0.8 5.8 transcriptional regulator, LacI family compare
Atu1760 +0.8 1.5 hypothetical protein compare
Atu4869 +0.7 3.3 hypothetical protein compare
Atu8093 +0.7 3.8 hypothetical protein compare
Atu3024 +0.7 5.3 sugar ABC transporter permease compare
Atu3461 +0.7 2.3 GntR family transcriptional regulator compare
Atu3017 +0.7 1.4 phosphoglyceromutase compare
Atu5427 +0.7 2.3 hypothetical protein compare
Atu3183 +0.6 1.0 hypothetical protein compare
Atu4040 +0.6 1.7 hypothetical protein compare
Atu4867 +0.6 4.2 hypothetical protein compare
Atu4874 +0.6 4.3 hypothetical protein compare
Atu4866 +0.6 4.3 hypothetical protein compare
Atu3027 +0.6 4.5 dehydrogenase compare
Atu1836 +0.6 1.7 hypothetical protein compare
Atu3038 +0.6 3.8 dipeptide ABC transporter ATPase compare
Atu3688 +0.6 2.1 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu1701 +0.6 1.5 protein-L-isoaspartate O-methyltransferase compare
Atu0525 +0.6 3.2 transcriptional regulator, LuxR family compare
Atu4878 +0.6 3.5 hypothetical protein compare
Atu1302 +0.6 2.0 hypothetical protein compare
Atu1660 +0.6 2.6 hypothetical protein compare
Atu5121 +0.6 3.5 two component response regulator compare
Atu4872 +0.6 4.4 LysR family transcriptional regulator compare
Atu2648 +0.6 1.6 hypothetical protein compare
Atu8034 +0.6 1.3 hypothetical protein compare
Atu1679 +0.5 1.1 peptidyl prolyl cis-trans isomerase compare
Atu5047 +0.5 2.8 hypothetical protein compare
Atu0577 +0.5 2.0 FLAF protein compare
Atu4865 +0.5 3.5 oxidoreductase compare
Atu0063 +0.5 3.0 ABC transporter, substrate binding protein (sugar) compare
Atu2317 +0.5 2.4 hypothetical protein compare
Atu3030 +0.5 3.2 hypothetical protein compare
Atu2432 +0.5 1.1 hypothetical protein compare
Atu4792 +0.5 1.0 hypothetical protein compare
Atu0563 +0.5 3.5 flagellar motor switch protein FliG compare
Atu5444 +0.5 2.6 short-chain dehydrogenase compare
Atu1190 +0.5 1.6 hypothetical protein compare
Atu2344 +0.5 1.6 lactoylglutathione lyase compare
Atu4868 +0.5 3.6 oxidoreductase compare
Atu0756 +0.5 3.4 phosphoglycerate mutase compare
Atu2354 +0.5 2.7 transcriptional regulator, MarR family compare
Atu1333 +0.5 1.9 outer membrane protein compare
Atu3036 +0.5 2.3 dipeptide ABC transporter permease compare
Atu0558 +0.5 3.2 flagellar basal body rod protein compare
Atu2631 +0.5 2.3 hypothetical protein compare
Atu6189 +0.5 0.9 protein secretion chaperone compare
Atu2777 +0.5 2.9 hypothetical protein compare
Atu0905 +0.5 1.7 dnaK suppressor protein compare
Atu0559 +0.5 3.2 hypothetical protein compare
Atu4862 +0.5 3.9 IS21 family transposase compare
Atu0552 +0.5 3.7 flagellar basal-body rod protein compare
Atu3045 +0.5 1.7 hypothetical protein compare
Atu4072 +0.4 0.6 nodulation protein N compare
Atu0819 +0.4 1.4 hypothetical protein compare
Atu4217 +0.4 0.9 TetR family transcriptional regulator compare
Atu0883 +0.4 1.5 hypothetical protein compare
Atu2672 +0.4 2.3 hypothetical protein compare
Atu1573 +0.4 0.7 hypothetical protein compare
Atu2662 +0.4 0.4 acetyltransferase compare
Atu1031 +0.4 2.1 hypothetical protein compare
Atu4543 +0.4 2.8 LysR family transcriptional regulator compare
Atu4677 +0.4 1.0 hypothetical protein compare
Atu0940 +0.4 1.9 PemK protein compare
Atu4864 +0.4 2.1 MarR family transcriptional regulator compare
Atu0755 +0.4 1.5 hypothetical protein compare
Atu0576 +0.4 2.9 flagellar hook-associated protein compare
Atu2789 +0.4 2.1 hypothetical protein compare
Atu0555 +0.4 2.9 flagellar basal-body rod protein FlgB compare
Atu0550 +0.4 3.3 flagellar P-ring protein precursor compare
Atu4391 +0.4 1.3 nitric oxide reductase NorE protein compare
Atu1869 +0.4 1.6 hypothetical protein compare
Atu2163 +0.4 0.9 hypothetical protein compare
Atu0581 +0.4 3.2 flagellar biosynthesis protein compare
Atu0788 +0.4 1.6 hypothetical protein compare
Atu4854 +0.4 2.4 hypothetical protein compare
Atu4530 +0.4 1.9 TetR family transcriptional regulator compare
Atu2394 +0.4 2.0 Regulator of Biofilm formation, Fnr Family compare
Atu5158 +0.4 1.9 hypothetical protein compare
Atu0573 +0.4 2.3 transcriptional regulator compare
Atu0050 +0.4 2.0 two component response regulator compare
Atu4859 +0.4 3.0 hypothetical protein compare
Atu2794 +0.4 1.6 uroporphyrin-III C-methyltransferase compare
Atu0524 +0.4 2.2 transcriptional regulator, LuxR family compare
Atu1466 +0.4 0.8 hypothetical protein compare
Atu2125 +0.4 0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu3554 +0.4 2.0 hypothetical protein compare
Atu3031 +0.4 0.9 hypothetical protein compare
Atu4857 +0.4 1.6 mobilization protein C compare
Atu4025 +0.4 2.3 ferrichrome ABC transporter ATPase compare
Atu2265 +0.4 2.9 benzoate transport protein compare
Atu3032 +0.4 1.4 hypothetical protein compare
Atu5115 +0.4 0.7 hypothetical protein compare
Atu0280 +0.4 0.9 hypothetical protein compare
Atu0570 +0.4 3.1 Chemotaxis protein compare
Atu3807 +0.4 2.4 AsnC family transcriptional regulator compare
Atu3169 +0.4 2.0 sorbitol/mannitol ABC transporter permease compare
Atu3035 +0.4 3.2 two component response regulator compare
Atu1490 +0.4 1.2 arsenate reductase compare
Atu2201 +0.4 0.9 hydrolase compare
Atu6030 +0.4 1.8 ORF13 hypothetical protein compare
Atu1472 +0.4 1.6 hydrolase compare
Atu6123 +0.4 1.8 conserved hypothetical protein compare
Atu3034 +0.4 1.7 ROK family transcriptional regulator compare
Atu3267 +0.4 1.1 dipeptide ABC transporter permease compare
Atu1301 +0.4 2.0 hypothetical protein compare
Atu0413 +0.4 1.3 stress induced protein compare
Atu8154 +0.4 1.2 Plasmid stabilization system protein compare
Atu8063 +0.4 1.3 hypothetical protein compare
Atu5475 +0.4 1.0 hypothetical protein compare
Atu8155 +0.4 1.2 hypothetical protein compare
Atu2193 +0.4 0.5 hypothetical protein compare
Atu0545 +0.4 2.7 flagella associated protein compare
Atu8123 +0.4 2.0 hypothetical protein compare
Atu2659 +0.4 2.3 MFS permease compare
Atu1254 +0.4 0.8 transcriptional regulator, ArsR family compare
Atu0865 +0.4 2.0 transcriptional regulator, AraC family compare
Atu4856 +0.4 2.5 nucleotidyltransferase compare
Atu0546 +0.4 2.1 flagellar biosynthetic protein compare
Atu3394 +0.4 2.3 iron ABC transporter ATPase compare
Atu8025 +0.4 0.9 hypothetical protein compare
Atu0557 +0.4 2.6 flagellum-specific ATP synthase compare
Atu0206 +0.4 1.5 hypothetical protein compare
Atu2268 +0.4 2.4 ECF family sigma factor compare
Atu1744 +0.4 1.3 nitroreductase family protein compare
Atu1864 +0.4 2.3 putative homoserine/homoserine lactone efflux protein compare
Atu2282 +0.4 1.8 thymidine kinase compare
Atu3029 +0.4 2.3 glucarate dehydratase compare
Atu3040 +0.4 2.4 hypothetical protein compare
Atu2708 +0.3 1.9 MFS permease compare
Atu3033 +0.3 1.8 hypothetical protein compare
Atu0943 +0.3 0.6 hypothetical protein compare
Atu1175 +0.3 0.9 hypothetical protein compare
Atu1492 +0.3 1.0 transcriptional regulator, ArsR family compare
Atu1897 +0.3 2.0 short chain dehydrogenase compare
Atu3969 +0.3 1.8 sugar ABC transporter permease compare
Atu0734 +0.3 2.2 hypothetical protein compare
Atu0551 +0.3 1.3 flagellar protein FLGA precursor compare
Atu0569 +0.3 2.7 flagellar motor protein, PAL/OmpA family compare
Atu2258 +0.3 1.7 acetyltransferase compare
Atu4028 +0.3 1.4 recombination regulator RecX compare
Atu1639 +0.3 1.5 hypothetical protein compare
Atu1584 +0.3 2.0 hypothetical protein compare
Atu0579 +0.3 2.3 hook formation protein compare
Atu4633 +0.3 1.8 phosphate permease (N-terminal) compare
Atu0548 +0.3 2.7 flagellar L-ring protein precursor compare
Atu4486 +0.3 1.5 nitroreductase compare
Atu2025 +0.3 1.1 transcriptional regulator compare
Atu8054 +0.3 0.3 hypothetical protein compare
Atu1994 +0.3 1.7 acyl-CoA hydrolase compare
Atu3999 +0.3 0.8 dithiobiotin synthetase compare
Atu0784 +0.3 1.2 hypothetical protein compare
Atu4352 +0.3 1.5 hypothetical protein compare
Atu2738 +0.3 1.6 nucleoside-diphosphate-sugar epimerase compare
Atu8132 +0.3 2.0 hypothetical protein compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source Lactulose in Agrobacterium fabrum C58

For carbon source Lactulose across organisms