Experiment set7IT005 for Agrobacterium fabrum C58

Compare to:

D-Trehalose dihydrate carbon source

200 most important genes:

  gene name fitness t score description  
Atu1844 -7.4 -5.1 Phosphoribosylformylglycinamidine synthetase compare
Atu1075 -7.3 -5.0 amidophosphoribosyltransferase compare
Atu0679 -7.2 -7.0 ATP phosphoribosyltransferase compare
Atu2791 -7.0 -9.6 3-isopropylmalate dehydrogenase compare
Atu0486 -7.0 -4.8 dihydroorotate dehydrogenase compare
Atu0099 -6.6 -13.4 prephenate dehydratase compare
Atu2264 -6.6 -15.9 2-isopropylmalate synthase compare
Atu1688 -6.6 -4.5 indole-3-glycerol-phosphate synthase compare
Atu1308 -6.5 -6.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2036 -6.5 -17.9 acetolactate synthase III, large subunit compare
Atu1687 -6.5 -10.9 anthranilate phosphoribosyltransferase compare
Atu0017 -6.4 -4.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2709 -6.1 -22.1 3-isopropylmalate dehydratase, large subunit compare
Atu3783 -6.1 -17.1 glutamate synthase subunit beta compare
Atu3739 -6.1 -3.3 phosphoglycerate kinase compare
Atu0537 -6.0 -8.2 histidinol dehydrogenase compare
Atu0678 -5.9 -7.1 histidyl-tRNA synthetase compare
Atu2726 -5.9 -25.9 pyruvate carboxylase compare
Atu0432 -5.9 -12.6 O-succinylhomoserine sulfhydrylase compare
Atu3784 -5.9 -31.4 glutamate synthase large subunit compare
Atu1588 -5.9 -13.1 homoserine dehydrogenase compare
Atu2289 -5.9 -21.4 anthranilate synthase component I and II compare
Atu3706 -5.8 -11.9 D-3-phosphoglycerate dehydrogenase compare
Atu1750 -5.8 -8.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu3754 -5.8 -9.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0400 -5.7 -4.0 orotate phosphoribosyltransferase compare
Atu1850 -5.7 -5.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3707 -5.7 -5.5 phosphoserine aminotransferase compare
Atu2790 -5.7 -3.1 3-isopropylmalate dehydratase, small subunit compare
Atu3885 -5.6 -12.5 inositol monophosphatase compare
Atu0647 -5.5 -6.6 phosphoribosylamine--glycine ligase compare
Atu1205 -5.5 -16.6 threonine dehydratase compare
Atu2650 -5.4 -16.1 glycerol-3-phosphate dehydrogenase compare
Atu0298 -5.4 -6.4 orotidine 5 compare
Atu1140 -5.3 -4.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2040 -5.2 -7.4 phosphoserine phosphatase compare
Atu0399 -5.2 -3.6 dihydroorotase compare
Atu1141 -5.1 -7.8 Phosphoribosylglycinamide synthetase compare
Atu2155 -5.1 -21.9 methionine synthase compare
Atu2718 -5.0 -10.7 homoserine O-succinyltransferase compare
Atu1307 -4.8 -7.5 dihydroorotase compare
Atu2747 -4.7 -13.2 hypothetical protein compare
Atu0184 -4.7 -3.2 glucokinase compare
Atu0038 -4.7 -4.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2274 -4.7 -10.1 cation efflux system protein compare
Atu1845 -4.4 -4.2 phosphoribosylformylglycinamidine synthase I compare
Atu3755 -4.4 -7.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0039 -4.3 -4.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu1030 -4.1 -3.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2548 -3.7 -21.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0598 -3.7 -14.3 phosphogluconate dehydratase compare
Atu2015 -3.7 -16.7 aminotransferase compare
Atu0040 -3.6 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4075 -3.6 -8.8 glycogen synthase compare
Atu0185 -3.6 -5.6 methylglyoxal synthase compare
Atu0043 -3.5 -3.6 imidazoleglycerol-phosphate dehydratase compare
Atu1686 -3.4 -17.9 peptidyl-prolyl cis-trans isomerse D compare
Atu1620 -3.3 -16.2 triosephosphate isomerase compare
Atu3483 -3.3 -11.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3482 -3.2 -12.8 pantoate--beta-alanine ligase compare
Atu1589 -3.2 -8.1 aminotransferase, class I compare
Atu3469 -3.1 -3.4 phosphoglyceromutase compare
Atu1456 -3.0 -14.2 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0346 -3.0 -5.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1446 -2.9 -3.0 two component response regulator compare
Atu1454 -2.9 -8.8 siroheme synthase compare
Atu2123 -2.7 -4.8 methylenetetrahydrofolate reductase compare
Atu0641 -2.7 -5.8 hypothetical protein compare
Atu0595 -2.5 -9.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0041 -2.5 -3.1 glutamine amidotransferase compare
Atu0592 -2.5 -7.8 ABC transporter, membrane spanning protein compare
Atu1359 -2.4 -1.9 dnaK deletion suppressor protein compare
Atu0591 -2.4 -11.8 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0593 -2.3 -8.0 ABC transporter, membrane spanning protein compare
Atu0723 -2.2 -2.4 FAD dependent oxidoreductase compare
Atu4613 -2.2 -15.1 glycosyltransferase compare
Atu3731 -2.2 -11.3 5-formyltetrahydrofolate cyclo-ligase compare
Atu1685 -2.1 -2.0 hypothetical protein compare
Atu1455 -2.1 -6.2 hypothetical protein compare
Atu2209 -2.0 -4.6 pyrroline-5-carboxylate reductase compare
Atu0332 -1.8 -8.3 RNA polymerase sigma-54 factor compare
Atu0594 -1.8 -9.2 alpha-glucosidase conserved
Atu4615 -1.7 -9.9 glucose-1-phosphate thymidylyltransferase compare
Atu2684 -1.7 -2.3 hypothetical protein compare
Atu1464 -1.7 -7.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu1462 -1.6 -11.1 glycine cleavage system protein P2 compare
Atu0029 -1.6 -6.2 S-adenosylhomocysteine hydrolase compare
Atu0031 -1.6 -1.7 PTS system, IIA component compare
Atu1604 -1.6 -10.8 poly-beta-hydroxybutyrate synthase compare
Atu1445 -1.5 -4.7 two component sensor kinase compare
Atu4618 -1.5 -9.7 dTDP-rhamnose-3,5-epimerase compare
Atu8115 -1.5 -4.4 Hypothetical Protein compare
Atu4617 -1.5 -8.9 dTDP-D-glucose-4,6-dehydratase compare
Atu0030 -1.4 -2.3 phosphocarrier protein HPr compare
Atu4614 -1.4 -7.9 glycosyltransferase compare
Atu3353 -1.4 -9.3 mannose-1-phosphate guanylyltransferase compare
Atu4166 -1.4 -2.7 UDP-glucose 4-epimerase compare
Atu3311 -1.4 -10.8 phosphomannose isomerase compare
Atu6098 -1.4 -0.7 transcriptional regulator, HTH family compare
Atu1457 -1.3 -1.5 hypothetical protein compare
Atu1463 -1.3 -4.3 glycine cleavage system component H compare
Atu2728 -1.3 -4.3 beta (1-->2) glucan export ATP-binding protein compare
Atu0361 -1.2 -4.2 transcriptional regulator compare
Atu4711 -1.2 -4.6 two component sensor kinase compare
Atu0086 -1.2 -1.6 ribosome-binding factor A compare
Atu2183 -1.2 -6.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3486 -1.1 -3.8 DeoR family transcriptional regulator compare
Atu0971 -1.1 -3.7 two component sensor kinase compare
Atu4616 -1.0 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu2376 -1.0 -0.7 hypothetical protein compare
Atu3763 -0.9 -1.4 hypothetical protein compare
Atu1447 -0.9 -3.0 two component sensor kinase compare
Atu1566 -0.9 -1.3 hypothetical protein compare
Atu0953 -0.9 -1.2 hypothetical protein compare
Atu0188 -0.9 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu4317 -0.9 -1.9 TetR family transcriptional regulator compare
Atu4773 -0.9 -1.4 two component response regulator compare
Atu1062 -0.8 -1.9 phosphatidylserine synthase compare
Atu3730 -0.8 -1.4 hypothetical protein compare
Atu5115 -0.8 -1.2 hypothetical protein compare
Atu3289 -0.8 -2.3 thiamine-phosphate pyrophosphorylase compare
Atu2554 -0.8 -1.8 lysyl-tRNA synthetase compare
Atu2379 -0.8 -4.9 phosphomannomutase compare
Atu0190 -0.8 -4.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0434 -0.8 -1.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2406 -0.8 -1.5 hypothetical protein compare
Atu2442 -0.7 -1.3 hypothetical protein compare
Atu4609 -0.7 -5.5 glycosyltransferase compare
Atu0842 -0.7 -1.9 hypothetical protein compare
Atu1439 -0.7 -2.1 hypothetical protein compare
Atu2770 -0.7 -4.2 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2335 -0.7 -1.9 hypothetical protein compare
Atu3017 -0.7 -1.1 phosphoglyceromutase compare
Atu0812 -0.7 -2.6 hypothetical protein compare
Atu4608 -0.7 -5.4 hypothetical protein compare
Atu1572 -0.7 -3.3 hydrolase compare
Atu0846 -0.7 -2.7 transcriptional regulator, MarR family compare
Atu2439 -0.7 -1.2 hypothetical protein compare
Atu0422 -0.7 -1.3 ABC transporter, membrane spanning protein compare
Atu0894 -0.7 -1.6 ABC transporter, membrane spanning protein compare
Atu0124 -0.7 -3.6 hypothetical protein compare
Atu1163 -0.7 -1.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1028 -0.7 -1.7 hypothetical protein compare
Atu3740 -0.7 -4.6 fructose bisphosphate aldolase compare
Atu0702 -0.7 -1.4 calcium-binding protein, regucalcin compare
Atu2831 -0.6 -3.2 glucose inhibited division protein A compare
Atu0845 -0.6 -3.1 hypothetical protein compare
Atu0777 -0.6 -0.8 hypothetical protein compare
Atu3496 -0.6 -3.5 hypothetical protein compare
Atu1546 -0.6 -3.2 transcriptional regulator, MerR family compare
Atu4366 -0.6 -2.4 short chain dehydrogenase compare
Atu2787 -0.6 -1.0 hypothetical protein compare
Atu3343 -0.6 -3.9 trehalose utilization-like protein compare
Atu8162 -0.6 -0.9 hypothetical protein compare
Atu4418 -0.6 -2.5 glutaryl-CoA dehydrogenase compare
Atu3342 -0.6 -3.5 trehalose utilization-like protein compare
Atu2115 -0.6 -4.1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2832 -0.6 -2.7 tRNA modification GTPase compare
Atu0876 -0.6 -1.3 superoxide dismutase compare
Atu4187 -0.6 -1.1 tRNA-Met compare
Atu1076 -0.6 -2.3 colicin V production protein compare
Atu1007 -0.6 -2.2 hypothetical protein compare
Atu2205 -0.6 -2.1 transcriptional regulator, MarR family compare
Atu6112 -0.6 -1.8 conserved hypothetical protein compare
Atu1774 -0.6 -3.1 ABC transporter, substrate binding protein (peptide) compare
Atu1902 -0.6 -2.7 transketolase compare
Atu3757 -0.6 -1.5 hypothetical protein compare
Atu0319 -0.5 -0.9 ubiquinone biosynthesis protein compare
Atu4148 -0.5 -2.9 UDP-glucuronic acid epimerase compare
Atu2555 -0.5 -1.8 L-lysine 2,3-aminomutase compare
Atu3339 -0.5 -3.5 trehalose/maltose ABC transporter permease compare
Atu4068 -0.5 -1.1 sarcosine oxidase delta subunit compare
Atu0421 -0.5 -0.8 ABC transporter, membrane spanning protein compare
Atu3426 -0.5 -3.7 sulfonate monooxygenase compare
Atu0189 -0.5 -2.2 ABC transporter, membrane spanning protein (peptide) compare
Atu2349 -0.5 -1.4 hypothetical protein compare
Atu0535 -0.5 -2.7 hypothetical protein compare
Atu0565 -0.5 -1.8 hypothetical protein compare
Atu4477 -0.5 -3.4 TetR family transcriptional regulator compare
Atu5517 -0.5 -1.0 hypothetical protein compare
Atu1103 -0.5 -1.3 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3341 -0.5 -3.2 trehalose/maltose ABC transporter ATPase compare
Atu2127 -0.5 -3.1 L-carnitine dehydratase compare
Atu0895 -0.5 -1.6 ABC transporter, substrate binding protein compare
Atu3750 -0.5 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu0977 -0.5 -2.8 serine protease DO-like protease compare
Atu0025 -0.5 -1.3 hypothetical protein compare
Atu6133 -0.5 -2.4 conserved hypothetical protein compare
Atu2063 -0.5 -1.4 hypothetical protein compare
Atu2489 -0.5 -2.4 hypothetical protein compare
Atu0300 -0.5 -3.0 methyltransferase compare
Atu2267 -0.5 -2.7 hypothetical protein compare
Atu2798 -0.5 -2.0 precorrin-6y methyltransferase compare
Atu4077 -0.5 -3.2 glycogen branching protein compare
Atu5155 -0.5 -2.0 MarR family transcriptional regulator compare
Atu0630 -0.5 -1.4 hypothetical protein compare
Atu2125 -0.5 -1.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1518 -0.5 -2.4 transcriptional regulator, Fur family compare
Atu0836 -0.5 -1.5 Glutathione-S-transferase compare
Atu0926 -0.5 -2.3 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Trehalose dihydrate in Agrobacterium fabrum C58

For carbon source D-Trehalose dihydrate across organisms