Experiment set7IT003 for Agrobacterium fabrum C58

Compare to:

Maltitol carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -7.6 -6.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu0679 -6.9 -6.7 ATP phosphoribosyltransferase compare
Atu1845 -6.6 -4.5 phosphoribosylformylglycinamidine synthase I compare
Atu0099 -6.6 -13.4 prephenate dehydratase compare
Atu3706 -6.6 -7.9 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -6.6 -6.4 phosphoserine phosphatase compare
Atu3707 -6.6 -4.5 phosphoserine aminotransferase compare
Atu0678 -6.5 -4.5 histidyl-tRNA synthetase compare
Atu0432 -6.4 -10.7 O-succinylhomoserine sulfhydrylase compare
Atu2289 -6.3 -19.8 anthranilate synthase component I and II compare
Atu1687 -6.3 -12.0 anthranilate phosphoribosyltransferase compare
Atu0038 -6.3 -7.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2726 -6.1 -23.3 pyruvate carboxylase compare
Atu0537 -6.1 -7.2 histidinol dehydrogenase compare
Atu2036 -6.0 -16.4 acetolactate synthase III, large subunit compare
Atu1075 -5.9 -8.1 amidophosphoribosyltransferase compare
Atu2791 -5.9 -10.6 3-isopropylmalate dehydrogenase compare
Atu0486 -5.8 -5.7 dihydroorotate dehydrogenase compare
Atu2709 -5.8 -21.5 3-isopropylmalate dehydratase, large subunit compare
Atu1205 -5.8 -16.8 threonine dehydratase compare
Atu0298 -5.8 -4.0 orotidine 5 compare
Atu2264 -5.8 -15.8 2-isopropylmalate synthase compare
Atu1308 -5.7 -5.9 aspartate carbamoyl transferase catalytic subunit compare
Atu2650 -5.6 -16.1 glycerol-3-phosphate dehydrogenase compare
Atu2155 -5.3 -24.0 methionine synthase compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu2274 -5.2 -11.5 cation efflux system protein compare
Atu1030 -5.1 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3783 -5.1 -19.3 glutamate synthase subunit beta compare
Atu1446 -5.1 -3.5 two component response regulator compare
Atu1688 -4.9 -8.2 indole-3-glycerol-phosphate synthase compare
Atu1588 -4.9 -11.8 homoserine dehydrogenase compare
Atu1307 -4.8 -5.4 dihydroorotase compare
Atu1140 -4.8 -4.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2718 -4.8 -9.7 homoserine O-succinyltransferase compare
Atu0039 -4.7 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu2790 -4.7 -3.9 3-isopropylmalate dehydratase, small subunit compare
Atu0399 -4.7 -5.6 dihydroorotase compare
Atu3784 -4.7 -25.5 glutamate synthase large subunit compare
Atu0043 -4.7 -4.1 imidazoleglycerol-phosphate dehydratase compare
Atu3754 -4.7 -6.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3885 -4.6 -9.6 inositol monophosphatase compare
Atu0017 -4.6 -5.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3342 -4.6 -10.5 trehalose utilization-like protein compare
Atu0400 -4.5 -5.3 orotate phosphoribosyltransferase compare
Atu1850 -4.4 -5.3 phosphoribosylformylglycinamidine synthetase II compare
Atu3343 -4.4 -12.0 trehalose utilization-like protein conserved
Atu2747 -4.3 -13.3 hypothetical protein compare
Atu1141 -4.2 -8.6 Phosphoribosylglycinamide synthetase compare
Atu0647 -4.2 -8.0 phosphoribosylamine--glycine ligase compare
Atu1844 -3.6 -4.3 Phosphoribosylformylglycinamidine synthetase compare
Atu3739 -3.6 -4.2 phosphoglycerate kinase compare
Atu0040 -3.5 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3755 -3.5 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2015 -3.5 -17.3 aminotransferase compare
Atu3469 -3.2 -4.1 phosphoglyceromutase compare
Atu0184 -3.0 -4.0 glucokinase compare
Atu2548 -2.9 -16.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1589 -2.9 -9.7 aminotransferase, class I compare
Atu1456 -2.7 -11.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0401 -2.7 -7.2 fructokinase compare
Atu0346 -2.7 -6.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1686 -2.6 -15.3 peptidyl-prolyl cis-trans isomerse D compare
Atu3482 -2.6 -8.8 pantoate--beta-alanine ligase compare
Atu0598 -2.6 -12.6 phosphogluconate dehydratase compare
Atu1359 -2.5 -1.8 dnaK deletion suppressor protein compare
Atu0641 -2.5 -5.4 hypothetical protein compare
Atu1454 -2.5 -8.3 siroheme synthase compare
Atu3339 -2.5 -10.5 trehalose/maltose ABC transporter permease conserved
Atu3730 -2.5 -2.8 hypothetical protein compare
Atu3483 -2.4 -4.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3731 -2.3 -10.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu4166 -2.3 -3.6 UDP-glucose 4-epimerase compare
Atu3338 -2.2 -11.6 trehalose/maltose ABC transporter substrate-binding protein conserved
Atu1620 -2.2 -10.2 triosephosphate isomerase compare
Atu3340 -2.1 -11.6 trehalose/maltose ABC transporter permease conserved
Atu1457 -2.0 -2.3 hypothetical protein compare
Atu2123 -2.0 -8.2 methylenetetrahydrofolate reductase compare
Atu0421 -1.9 -2.0 ABC transporter, membrane spanning protein compare
Atu3341 -1.9 -8.5 trehalose/maltose ABC transporter ATPase conserved
Atu1455 -1.8 -4.6 hypothetical protein compare
Atu4711 -1.7 -7.8 two component sensor kinase compare
Atu4318 -1.7 -8.7 xylitol dehydrogenase compare
Atu1463 -1.6 -4.5 glycine cleavage system component H compare
Atu1464 -1.6 -8.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu4616 -1.6 -2.7 dTDP-4-dehydrorhamnose reductase compare
Atu1462 -1.6 -9.3 glycine cleavage system protein P2 compare
Atu0031 -1.5 -1.6 PTS system, IIA component compare
Atu0332 -1.4 -7.6 RNA polymerase sigma-54 factor compare
Atu4075 -1.4 -6.2 glycogen synthase compare
Atu0029 -1.4 -4.4 S-adenosylhomocysteine hydrolase compare
Atu2209 -1.3 -4.5 pyrroline-5-carboxylate reductase compare
Atu1327 -1.3 -3.7 NADH-ubiquinone oxidoreductase compare
Atu1028 -1.3 -2.7 hypothetical protein compare
Atu0185 -1.3 -2.3 methylglyoxal synthase compare
Atu8115 -1.2 -4.4 Hypothetical Protein compare
Atu4613 -1.1 -7.6 glycosyltransferase compare
Atu0062 -1.0 -6.6 transcriptional regulator, ROK family compare
Atu2684 -1.0 -1.5 hypothetical protein compare
Atu1447 -1.0 -2.8 two component sensor kinase compare
Atu4773 -1.0 -1.6 two component response regulator compare
Atu1182 -1.0 -2.4 hypothetical protein compare
Atu0188 -1.0 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0590 -1.0 -4.6 transcriptional regulator repressor compare
Atu8054 -1.0 -0.6 hypothetical protein compare
Atu4615 -1.0 -6.1 glucose-1-phosphate thymidylyltransferase compare
Atu4618 -1.0 -6.9 dTDP-rhamnose-3,5-epimerase compare
Atu4617 -1.0 -7.7 dTDP-D-glucose-4,6-dehydratase compare
Atu1685 -0.9 -1.1 hypothetical protein compare
Atu2205 -0.9 -4.1 transcriptional regulator, MarR family compare
Atu4614 -0.9 -6.2 glycosyltransferase compare
Atu8087 -0.9 -0.8 putative peptidoglycan binding protein compare
Atu0422 -0.9 -0.7 ABC transporter, membrane spanning protein compare
Atu2376 -0.9 -0.7 hypothetical protein compare
Atu0846 -0.9 -2.8 transcriptional regulator, MarR family compare
Atu1163 -0.8 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2057 -0.8 -2.2 DNA helicase II compare
Atu1604 -0.8 -5.1 poly-beta-hydroxybutyrate synthase compare
Atu1536 -0.8 -3.0 cytochrome C oxidase, FixO chain compare
Atu1847 -0.8 -1.5 hypothetical protein compare
Atu2237 -0.8 -3.1 cytochrome c1 compare
Atu0086 -0.8 -1.2 ribosome-binding factor A compare
Atu1535 -0.8 -1.7 cytochrome c oxidase, FixQ chain compare
Atu2800 -0.8 -1.1 precorrin-3B C17-methyltransferase compare
Atu0189 -0.8 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu6153 -0.8 -1.8 conserved hypothetical protein compare
Atu0190 -0.8 -5.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4346 -0.8 -4.4 hypothetical protein compare
Atu5142 -0.8 -1.2 hypothetical protein compare
Atu2694 -0.8 -1.0 hypothetical protein compare
Atu1445 -0.7 -2.2 two component sensor kinase compare
Atu0837 -0.7 -2.2 transcriptional regulator, MarR family compare
Atu4317 -0.7 -2.3 TetR family transcriptional regulator compare
Atu2249 -0.7 -1.0 hypothetical protein compare
Atu1714 -0.7 -1.3 exonuclease III compare
Atu8020 -0.7 -1.8 hypothetical protein compare
Atu4155 -0.7 -3.9 aliphatic sulfonate ABC transporter permease compare
Atu1529 -0.7 -3.0 nitrogen fixation protein FixH compare
Atu0103 -0.7 -4.5 penicillin-binding protein compare
Atu2113 -0.7 -2.5 N-acetylmuramoyl-L-alanine amidase compare
Atu8194 -0.7 -2.1 hypothetical protein compare
Atu1149 -0.7 -1.4 adenylate cyclase compare
Atu3353 -0.7 -4.8 mannose-1-phosphate guanylyltransferase compare
Atu3763 -0.7 -1.0 hypothetical protein compare
Atu3311 -0.7 -5.7 phosphomannose isomerase compare
Atu2183 -0.7 -5.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4477 -0.7 -3.9 TetR family transcriptional regulator compare
Atu2238 -0.7 -4.0 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2522 -0.7 -4.4 agrobacterium chromosomal virulence protein B compare
Atu0812 -0.7 -1.9 hypothetical protein compare
Atu2235 -0.6 -0.8 hypothetical protein compare
Atu1602 -0.6 -2.7 transcriptional activator, Crp family compare
Atu0976 -0.6 -1.2 cycL protein compare
Atu5451 -0.6 -0.8 hypothetical protein compare
Atu2207 -0.6 -2.2 two component sensor kinase compare
Atu1694 -0.6 -1.8 hypothetical protein compare
Atu1364 -0.6 -2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2728 -0.6 -2.1 beta (1-->2) glucan export ATP-binding protein compare
Atu1076 -0.6 -2.7 colicin V production protein compare
Atu0973 -0.6 -3.0 cycH protein compare
Atu1774 -0.6 -2.9 ABC transporter, substrate binding protein (peptide) compare
Atu0703 -0.6 -1.7 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu1252 -0.6 -2.7 hypothetical protein compare
Atu2555 -0.6 -1.8 L-lysine 2,3-aminomutase compare
Atu8191 -0.6 -1.0 hypothetical protein compare
Atu0795 -0.6 -1.3 hypothetical protein compare
Atu0124 -0.6 -2.7 hypothetical protein compare
Atu0030 -0.6 -1.1 phosphocarrier protein HPr compare
Atu8023 -0.6 -1.5 hypothetical protein compare
Atu1031 -0.6 -2.1 hypothetical protein compare
Atu5155 -0.6 -1.7 MarR family transcriptional regulator compare
Atu0565 -0.6 -2.1 hypothetical protein compare
Atu3486 -0.6 -2.0 DeoR family transcriptional regulator compare
Atu1219 -0.6 -0.9 hypothetical protein compare
Atu0535 -0.6 -1.9 hypothetical protein compare
Atu3518 -0.6 -3.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0109 -0.5 -1.3 transcriptional regulator, MarR family compare
Atu3740 -0.5 -3.6 fructose bisphosphate aldolase compare
Atu1546 -0.5 -2.4 transcriptional regulator, MerR family compare
Atu0361 -0.5 -1.3 transcriptional regulator compare
Atu4609 -0.5 -4.2 glycosyltransferase compare
Atu6045 -0.5 -0.8 replication protein C compare
Atu2585 -0.5 -3.2 hypothetical protein compare
Atu3313 -0.5 -2.5 hypothetical protein compare
Atu0201 -0.5 -1.3 hypothetical protein compare
Atu5167 -0.5 -1.9 type IV secretion protein AvhB6 compare
Atu1537 -0.5 -3.3 cytochrome-c oxidase, FixN chain compare
Atu1980 -0.5 -1.8 hypothetical protein compare
Atu1607 -0.5 -1.7 DNA repair protein compare
Atu1748 -0.5 -3.9 NIFU-like protein compare
Atu2020 -0.5 -1.8 transcriptional regulator, TetR family compare
Atu2592 -0.5 -2.8 hypothetical protein compare
Atu0770 -0.5 -1.8 cytochrome C oxidase assembly protein compare
Atu0153 -0.5 -2.5 transcriptional regulator, Fur family compare
Atu3160 -0.5 -1.6 hypothetical protein compare
Atu1344 -0.5 -0.9 hypothetical protein compare
Atu1528 -0.5 -3.5 nitrogen fixation protein FixI compare
Atu2746 -0.5 -2.0 hypothetical protein compare
Atu4161 -0.5 -0.6 hypothetical protein compare
Atu0971 -0.5 -1.9 two component sensor kinase compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Maltitol in Agrobacterium fabrum C58

For carbon source Maltitol across organisms