Experiment set7IT001 for Agrobacterium fabrum C58

Compare to:

palatinose hydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu1846 +0.9 1.8 hypothetical protein compare
Atu2193 +0.8 1.4 hypothetical protein compare
Atu5451 +0.8 1.0 hypothetical protein compare
Atu6189 +0.8 1.3 protein secretion chaperone compare
Atu8161 +0.7 1.5 hypothetical protein compare
Atu0976 +0.7 2.0 cycL protein compare
Atu8054 +0.7 0.7 hypothetical protein compare
Atu1775 +0.7 1.9 polyketide biosynthesis associated protein compare
Atu6098 +0.7 0.7 transcriptional regulator, HTH family compare
Atu1760 +0.7 1.3 hypothetical protein compare
Atu6138 +0.6 3.5 Repressor of the acc and arc operons compare
Atu1869 +0.6 2.1 hypothetical protein compare
Atu1225 +0.6 1.3 hypothetical protein compare
Atu1573 +0.6 1.4 hypothetical protein compare
Atu2433 +0.6 1.2 hypothetical protein compare
Atu1325 +0.6 1.7 acetyltransferase compare
Atu0883 +0.5 2.1 hypothetical protein compare
Atu0640 +0.5 1.9 hypothetical protein compare
Atu4144 +0.5 0.9 hypothetical protein compare
Atu1260 +0.5 1.4 hypothetical protein compare
Atu3429 +0.5 1.3 hypothetical protein compare
Atu4290 +0.5 1.9 hypothetical protein compare
Atu8168 +0.5 1.5 hypothetical protein compare
Atu2432 +0.5 1.0 hypothetical protein compare
Atu5427 +0.5 1.6 hypothetical protein compare
Atu2662 +0.5 0.6 acetyltransferase compare
Atu1264 +0.5 2.3 hypothetical protein compare
Atu3177 +0.5 2.4 ribonuclease H compare
Atu4159 +0.5 1.6 AsnC family transcriptional regulator compare
Atu3031 +0.5 1.2 hypothetical protein compare
Atu1254 +0.5 1.0 transcriptional regulator, ArsR family compare
Atu1952 +0.5 0.7 hypothetical protein compare
Atu5502 +0.5 1.6 hypothetical protein compare
Atu2484 +0.5 1.3 hypothetical protein compare
Atu6131 +0.5 2.1 TraR Antiactivator compare
Atu3466 +0.5 2.1 ArsR family transcriptional regulator compare
Atu8055 +0.5 1.5 hypothetical protein compare
Atu2236 +0.5 2.3 adenine phosphoribosyltransferase compare
Atu3566 +0.4 2.0 hypothetical protein compare
Atu6186 +0.4 1.4 virA/G regulated protein compare
Atu1004 +0.4 1.4 hypothetical protein compare
Atu5540 +0.4 0.5 hypothetical protein compare
Atu0566 +0.4 1.1 hypothetical protein compare
Atu6149 +0.4 2.1 hypothetical protein compare
Atu2317 +0.4 2.3 hypothetical protein compare
Atu3265 +0.4 2.7 hypothetical protein compare
Atu3216 +0.4 2.6 oligopeptide ABC transporter ATPase compare
Atu0317 +0.4 2.3 hypothetical protein compare
Atu5475 +0.4 1.3 hypothetical protein compare
Atu1083 +0.4 1.7 hypothetical protein compare
Atu4897 +0.4 0.8 hypothetical protein compare
Atu0983 +0.4 1.2 hypothetical protein compare
Atu2384 +0.4 1.3 transcriptional regulator, TetR family compare
Atu0413 +0.4 0.9 stress induced protein compare
Atu0784 +0.4 1.4 hypothetical protein compare
Atu1660 +0.4 1.9 hypothetical protein compare
Atu0707 +0.4 2.1 transcriptional regulator, LuxR family compare
Atu3299 +0.4 1.7 hypothetical protein compare
Atu1701 +0.4 1.1 protein-L-isoaspartate O-methyltransferase compare
Atu1203 +0.4 2.3 hypothetical protein compare
Atu2248 +0.4 2.2 hypothetical protein compare
Atu3822 +0.4 2.1 hypothetical protein compare
Atu4449 +0.4 2.0 sorbitol/mannitol ABC transporter permease compare
Atu4223 +0.4 1.1 sarcosine oxidase delta subunit compare
Atu0280 +0.4 1.0 hypothetical protein compare
Atu1830 +0.4 1.8 bacterioferritin comigratory protein compare
Atu4792 +0.4 0.8 hypothetical protein compare
Atu2772 +0.4 1.9 Invasion protein A compare
Atu3915 +0.4 1.6 MerR family transcriptional regulator compare
Atu0755 +0.4 1.7 hypothetical protein compare
Atu1919 +0.4 2.4 hypothetical protein compare
Atu1584 +0.4 1.6 hypothetical protein compare
Atu3663 +0.4 0.7 hypothetical protein compare
Atu2055 +0.4 2.5 HlyD family secretion protein compare
Atu5116 +0.4 2.1 transcriptional regulator protein compare
Atu8023 +0.4 1.2 hypothetical protein compare
Atu0115 +0.4 0.6 hypothetical protein compare
Atu5057 +0.4 0.7 hypothetical protein compare
Atu0905 +0.4 1.8 dnaK suppressor protein compare
Atu1897 +0.4 1.3 short chain dehydrogenase compare
Atu0924 +0.4 1.1 hypothetical protein compare
Atu1321 +0.4 1.9 hypothetical protein compare
Atu0174 +0.4 1.9 ABC transporter, nucleotide binding/ATPase protein (phosphonate) compare
Atu0546 +0.4 3.0 flagellar biosynthetic protein compare
Atu2574 +0.4 2.1 hypothetical protein compare
Atu0564 +0.3 2.8 flagellar biosynthetic protein compare
Atu1232 +0.3 1.3 hypothetical protein compare
Atu3071 +0.3 1.9 hypothetical protein compare
Atu8017 +0.3 1.7 hypothetical protein compare
Atu0782 +0.3 1.7 hypothetical protein compare
Atu0340 +0.3 0.6 SAM dependent methyltransferase compare
Atu2465 +0.3 1.2 two component sensor kinase compare
Atu0703 +0.3 1.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2464 +0.3 1.4 formyltetrahydrofolate deformylase compare
Atu5547 +0.3 1.9 metallo-beta-lactamase superfamily protein compare
Atu4589 +0.3 1.4 transmembrane transport protein compare
Atu0419 +0.3 0.9 two component sensor kinase compare
Atu1026 +0.3 0.9 hypothetical protein compare
Atu0550 +0.3 2.8 flagellar P-ring protein precursor compare
Atu0105 +0.3 1.7 hypothetical protein compare
Atu8174 +0.3 1.5 hypothetical protein compare
Atu8024 +0.3 1.8 hypothetical protein compare
Atu2437 +0.3 1.4 hypothetical protein compare
Atu0836 +0.3 1.1 Glutathione-S-transferase compare
Atu0681 +0.3 1.8 hypothetical protein compare
Atu6026 +0.3 1.7 ABC transporter, membrane spanning protein (nopaline) compare
Atu2394 +0.3 1.4 Regulator of Biofilm formation, Fnr Family compare
Atu0577 +0.3 1.4 FLAF protein compare
Atu5457 +0.3 1.9 dihydrodipicolinate synthase compare
Atu6040 +0.3 1.6 conjugal transfer protein compare
Atu4875 +0.3 1.7 hypothetical protein compare
Atu1291 +0.3 1.0 hypothetical protein compare
Atu1220 +0.3 1.8 methylated-DNA--protein-cysteine methyltransferase compare
Atu0011 +0.3 1.8 transcriptional regulator compare
Atu1634 +0.3 1.0 hypothetical protein compare
Atu0797 +0.3 1.9 hydrolase compare
Atu5030 +0.3 1.9 hypothetical protein compare
Atu3657 +0.3 2.0 hypothetical protein compare
Atu1470 +0.3 0.6 Camphor resistance protein compare
Atu1994 +0.3 1.5 acyl-CoA hydrolase compare
Atu8138 +0.3 0.8 hypothetical protein compare
Atu0996 +0.3 1.3 zinc-binding dehydrogenase compare
Atu2478 +0.3 1.4 hypothetical protein compare
Atu3018 +0.3 1.2 hypothetical protein compare
Atu0746 +0.3 1.2 hypothetical protein compare
Atu3085 +0.3 1.8 hydantoin racemase compare
Atu0547 +0.3 2.1 flagellar protein compare
Atu1886 +0.3 1.5 hypothetical protein compare
Atu4496 +0.3 1.5 acetyltransferase compare
Atu1031 +0.3 1.5 hypothetical protein compare
Atu0777 +0.3 0.5 hypothetical protein compare
Atu3767 +0.3 1.7 diguanylate cyclase compare
Atu2072 +0.3 1.6 ribosomal protein L11 methyltransferase compare
Atu4287 +0.3 2.1 NonF-like protein compare
Atu2163 +0.3 0.7 hypothetical protein compare
Atu8156 +0.3 1.4 hypothetical protein compare
Atu0558 +0.3 1.9 flagellar basal body rod protein compare
Atu1302 +0.3 0.8 hypothetical protein compare
Atu2494 +0.3 1.9 NAD(P)+ transhydrogenase beta chain compare
Atu3028 +0.3 2.0 hypothetical protein compare
Atu1836 +0.3 0.9 hypothetical protein compare
Atu0545 +0.3 2.1 flagella associated protein compare
Atu5473 +0.3 1.5 D-alanine aminotransferase compare
Atu1549 +0.3 1.5 hypothetical protein compare
Atu1741 +0.3 1.6 hypothetical protein compare
Atu1043 +0.3 1.5 hypothetical protein compare
Atu0544 +0.3 0.8 hypothetical protein compare
Atu6145 +0.3 1.6 arabinose phosphate phosphatase compare
Atu3953 +0.3 1.9 hydroxyproline-2-epimerase compare
Atu0107 +0.3 0.8 hypothetical protein compare
Atu3011 +0.3 1.1 ArsR family transcriptional regulator compare
Atu2187 +0.3 1.0 transcriptional regulator, ArsR family compare
Atu1892 +0.3 1.5 hypothetical protein compare
Atu1038 +0.3 1.6 two component response regulator compare
Atu4870 +0.3 2.3 NADP-dependent quinone oxidoreductase compare
Atu0063 +0.3 1.7 ABC transporter, substrate binding protein (sugar) compare
Atu8060 +0.3 1.9 hypothetical protein compare
Atu0734 +0.3 1.4 hypothetical protein compare
Atu6157 +0.3 1.5 conserved hypothetical protein compare
Atu0249 +0.3 1.9 ABC transporter, substrate binding protein (sugar) compare
Atu1887 +0.3 2.1 succinoglycan biosynthesis protein compare
Atu0955 +0.3 0.8 hypothetical protein compare
Atu1466 +0.3 0.3 hypothetical protein compare
Atu0627 +0.3 0.9 carboxymethylenebutenolidase compare
Atu2041 +0.3 0.9 acetyltransferase compare
Atu4694 +0.3 2.0 chlorohydrolase compare
Atu3554 +0.3 1.1 hypothetical protein compare
Atu5004 +0.3 1.7 deoxyfructose oxidoreductase compare
Atu3038 +0.3 1.8 dipeptide ABC transporter ATPase compare
Atu8200 +0.3 1.6 hypothetical protein compare
Atu1137 +0.3 1.9 NTP pyrophosphohydrolase, MutT family compare
Atu4866 +0.3 1.5 hypothetical protein compare
Atu3608 +0.3 1.9 hypothetical protein compare
Atu8047 +0.3 0.9 hypothetical protein compare
Atu1209 +0.3 1.8 transcriptional regulator, LysR family compare
Atu2725 +0.3 1.3 transcriptional regulator, DeoR family compare
Atu1482 +0.3 1.5 hypothetical protein compare
Atu8036 +0.3 0.7 protein YBGT-like protein compare
Atu0890 +0.3 1.0 hypothetical protein compare
Atu0152 +0.3 0.7 hypothetical protein compare
Atu6009 +0.3 1.2 indole-3-lactate synthase compare
Atu6160 +0.3 1.5 conserved hypothetical protein compare
Atu0574 +0.3 2.1 flagellar hook protein compare
Atu0287 +0.3 2.1 hypothetical protein compare
Atu0552 +0.3 2.1 flagellar basal-body rod protein compare
Atu0025 +0.3 1.0 hypothetical protein compare
Atu0690 +0.3 0.7 hypothetical protein compare
Atu5539 +0.3 1.6 HlyD family secretion protein compare
Atu8185 +0.3 1.2 hypothetical protein compare
Atu2646 +0.3 1.3 hypothetical protein compare
Atu0147 +0.3 1.0 hypothetical protein compare
Atu4410 +0.3 1.2 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu5406 +0.3 1.7 GntR family transcriptional regulator compare
Atu2174 +0.3 1.9 hypothetical protein compare
Atu0889 +0.3 1.3 hypothetical protein compare
Atu8099 +0.3 0.5 hypothetical protein compare
Atu0570 +0.3 2.1 Chemotaxis protein compare
Atu3616 +0.3 1.7 hypothetical protein compare
Atu1676 +0.3 1.6 para-aminobenzoate synthase component I compare
Atu1052 +0.3 1.0 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source palatinose hydrate in Agrobacterium fabrum C58

For carbon source palatinose hydrate across organisms