| | gene | name | fitness | t score | description | |
|---|
| b0222 | lpcA | -4.1 | -2.8 | phosphoheptose isomerase (NCBI) | compare |
| b3052 | rfaE | -3.7 | -3.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2528 | iscA | -3.4 | -2.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0741 | pal | -3.1 | -3.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3860 | dsbA | -3.1 | -11.8 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0683 | fur | -3.0 | -2.0 | ferric uptake regulator (NCBI) | compare |
| b0737 | tolQ | -3.0 | -2.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3620 | rfaF | -3.0 | -4.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3621 | rfaC | -2.9 | -2.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3390 | aroK | -2.8 | -2.7 | shikimate kinase I (NCBI) | compare |
| b1936 | intG | -2.8 | -1.9 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3839 | tatC | -2.7 | -7.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0049 | apaH | -2.7 | -1.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b2318 | truA | -2.7 | -3.6 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0740 | tolB | -2.7 | -2.6 | translocation protein TolB precursor (NCBI) | compare |
| b4593 | ymgI | -2.6 | -1.8 | hypothetical protein (RefSeq) | compare |
| b2285 | nuoE | -2.6 | -3.5 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0739 | tolA | -2.6 | -1.8 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2906 | visC | -2.5 | -7.9 | hypothetical protein (NCBI) | compare |
| b3619 | rfaD | -2.5 | -1.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2284 | nuoF | -2.5 | -5.9 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b4171 | miaA | -2.4 | -3.6 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2504 | yfgG | -2.4 | -1.6 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b3935 | priA | -2.3 | -3.4 | primosome assembly protein PriA (NCBI) | compare |
| b1185 | dsbB | -2.3 | -2.9 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2330 | yfcB | -2.2 | -2.6 | putative adenine-specific methylase (VIMSS) | compare |
| b0142 | folK | -2.1 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2277 | nuoM | -2.1 | -6.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2830 | nudH | -2.1 | -1.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4041 | plsB | -2.0 | -2.1 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b2288 | nuoA | -2.0 | -4.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1863 | ruvC | -2.0 | -1.3 | Holliday junction resolvase (NCBI) | compare |
| b2283 | nuoG | -2.0 | -7.2 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1855 | lpxM | -1.9 | -3.7 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1291 | sapD | -1.9 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2286 | nuoC | -1.9 | -5.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0726 | sucA | -1.8 | -4.3 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0738 | tolR | -1.8 | -1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3778 | rep | -1.8 | -7.8 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1860 | ruvB | -1.8 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b3169 | nusA | -1.8 | -2.2 | transcription elongation factor NusA (NCBI) | compare |
| b1192 | ldcA | -1.8 | -3.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b2276 | nuoN | -1.7 | -5.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3613 | yibP | -1.7 | -1.6 | putative membrane protein (VIMSS) | compare |
| b0439 | lon | -1.7 | -5.1 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2282 | nuoH | -1.7 | -3.7 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0018 | mokC | -1.7 | -2.0 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3816 | corA | -1.7 | -7.1 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b3792 | wzxE | -1.7 | -6.3 | O-antigen translocase (NCBI) | compare |
| b0232 | yafN | -1.6 | -0.9 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2576 | srmB | -1.6 | -3.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b2278 | nuoL | -1.6 | -8.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4042 | dgkA | -1.6 | -1.6 | diacylglycerol kinase (NCBI) | compare |
| b1758 | b1758 | -1.6 | -1.9 | putative cytochrome oxidase (VIMSS) | compare |
| b3838 | tatB | -1.6 | -5.7 | sec-independent translocase (NCBI) | compare |
| b2281 | nuoI | -1.6 | -2.9 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0386 | proC | -1.5 | -3.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0890 | ftsK | -1.5 | -1.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2287 | nuoB | -1.5 | -3.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1252 | tonB | -1.5 | -3.0 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3761 | trpT | -1.5 | -1.8 | tRNA-Trp (NCBI) | compare |
| b3844 | fre | -1.4 | -4.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0051 | ksgA | -1.4 | -4.0 | dimethyladenosine transferase (NCBI) | compare |
| b4146 | yjeK | -1.4 | -1.4 | predicted lysine aminomutase (NCBI) | compare |
| b3183 | obgE | -1.4 | -1.3 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1290 | sapF | -1.4 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0729 | sucD | -1.4 | -2.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3405 | ompR | -1.4 | -3.7 | osmolarity response regulator (NCBI) | compare |
| b0200 | gmhB | -1.4 | -0.9 | hypothetical protein (NCBI) | compare |
| b4053 | alr | -1.4 | -6.0 | alanine racemase (NCBI) | compare |
| b2620 | smpB | -1.3 | -1.2 | SsrA-binding protein (NCBI) | compare |
| b3426 | glpD | -1.3 | -2.0 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2947 | gshB | -1.3 | -2.5 | glutathione synthetase (NCBI) | compare |
| b2688 | gshA | -1.3 | -5.3 | glutamate--cysteine ligase (NCBI) | compare |
| b3204 | ptsN | -1.3 | -3.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0688 | pgm | -1.3 | -2.8 | phosphoglucomutase (NCBI) | compare |
| b4202 | rpsR | -1.3 | -1.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b1286 | rnb | -1.2 | -1.8 | exoribonuclease II (NCBI) | compare |
| b4375 | prfC | -1.2 | -4.0 | peptide chain release factor 3 (NCBI) | compare |
| b4179 | vacB | -1.2 | -5.3 | putative enzyme (VIMSS) | compare |
| b4655 | ythA | -1.2 | -1.7 | expressed protein (RefSeq) | compare |
| b3630 | rfaP | -1.2 | -6.7 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3414 | gntY | -1.2 | -3.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b2340 | sixA | -1.2 | -3.8 | phosphohistidine phosphatase (NCBI) | compare |
| b3916 | pfkA | -1.2 | -2.0 | 6-phosphofructokinase (NCBI) | compare |
| b1480 | sra | -1.2 | -1.9 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b2280 | nuoJ | -1.2 | -3.5 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0724 | sdhB | -1.2 | -4.0 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b4178 | yjeB | -1.2 | -3.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0438 | clpX | -1.2 | -4.6 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b4158 | yjeO | -1.1 | -3.5 | conserved inner membrane protein (NCBI) | compare |
| b1161 | ycgX | -1.1 | -1.0 | hypothetical protein (NCBI) | compare |
| b0015 | dnaJ | -1.1 | -5.2 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3493 | pitA | -1.1 | -4.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b2017 | yefM | -1.1 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3631 | rfaG | -1.1 | -7.9 | glucosyltransferase I (NCBI) | compare |
| b1231 | tyrT | -1.1 | -1.1 | tRNA-Tyr (NCBI) | compare |
| b0145 | dksA | -1.1 | -2.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2248 | yfaX | -1.0 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0428 | cyoE | -1.0 | -5.3 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1861 | ruvA | -1.0 | -0.7 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3500 | gor | -1.0 | -1.5 | glutathione reductase (NCBI) | compare |
| b4201 | priB | -1.0 | -2.2 | primosomal replication protein N (NCBI) | compare |
| b1257 | yciE | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b1293 | sapB | -1.0 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1613 | manA | -1.0 | -2.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2279 | nuoK | -1.0 | -1.8 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3741 | gidA | -1.0 | -1.7 | glucose-inhibited division protein A (NCBI) | compare |
| b3281 | aroE | -1.0 | -6.9 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3706 | trmE | -1.0 | -2.7 | tRNA modification GTPase (NCBI) | compare |
| b2531 | iscR | -1.0 | -1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2808 | gcvA | -1.0 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3791 | rffA | -1.0 | -3.6 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1084 | rne | -1.0 | -4.5 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3389 | aroB | -1.0 | -5.1 | 3-dehydroquinate synthase (NCBI) | compare |
| b4503 | yafF | -1.0 | -0.9 | no description | compare |
| b3836 | b3836 | -1.0 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b0431 | cyoB | -0.9 | -6.4 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b2188 | yejM | -0.9 | -5.4 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0053 | surA | -0.9 | -3.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2935 | tktA | -0.9 | -0.9 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2175 | spr | -0.9 | -2.9 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0167 | glnD | -0.9 | -3.2 | PII uridylyl-transferase (NCBI) | compare |
| b4596 | yciZ | -0.9 | -1.2 | hypothetical protein (RefSeq) | compare |
| b2189 | proL | -0.9 | -1.6 | tRNA-Pro (NCBI) | compare |
| b1677 | lpp | -0.9 | -1.8 | murein lipoprotein (NCBI) | compare |
| b0720 | gltA | -0.9 | -3.4 | citrate synthase (NCBI) | compare |
| b1109 | ndh | -0.9 | -2.1 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b1429 | tehA | -0.9 | -1.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1330 | ynaI | -0.9 | -3.1 | conserved inner membrane protein (NCBI) | compare |
| b0721 | sdhC | -0.9 | -3.6 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0429 | cyoD | -0.9 | -3.8 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b0437 | clpP | -0.9 | -2.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0723 | sdhA | -0.9 | -6.1 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b4538 | yoeF | -0.9 | -1.5 | hypothetical protein (RefSeq) | compare |
| b1951 | rcsA | -0.9 | -1.0 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1269 | rluB | -0.9 | -2.6 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3236 | mdh | -0.9 | -4.4 | malate dehydrogenase (NCBI) | compare |
| b2699 | recA | -0.9 | -0.8 | recombinase A (NCBI) | compare |
| b3889 | yiiE | -0.9 | -1.6 | predicted transcriptional regulator (RefSeq) | compare |
| b3387 | dam | -0.8 | -5.4 | DNA adenine methylase (NCBI) | compare |
| b1299 | puuR | -0.8 | -3.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3629 | rfaS | -0.8 | -2.6 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1236 | galU | -0.8 | -2.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1292 | sapC | -0.8 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2168 | fruK | -0.8 | -0.9 | 1-phosphofructokinase (NCBI) | compare |
| b2476 | purC | -0.8 | -2.0 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b1506 | yneL | -0.8 | -1.3 | predicted transcriptional regulator (NCBI) | compare |
| b3164 | pnp | -0.8 | -1.7 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2822 | recC | -0.8 | -1.9 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4414 | tff | -0.8 | -1.7 | unknown RNA (NCBI) | compare |
| b2904 | gcvH | -0.8 | -1.4 | glycine cleavage system protein H (NCBI) | compare |
| b3398 | yrfF | -0.8 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b0677 | nagA | -0.8 | -3.1 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0632 | dacA | -0.8 | -4.0 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3875 | ompL | -0.8 | -1.6 | predicted outer membrane porin L (NCBI) | compare |
| b1502 | ydeQ | -0.8 | -1.7 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1175 | minD | -0.8 | -2.9 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0430 | cyoC | -0.8 | -2.4 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b1058 | yceO | -0.8 | -0.4 | hypothetical protein (NCBI) | compare |
| b4139 | aspA | -0.8 | -4.7 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2684 | mprA | -0.8 | -2.4 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b4195 | ulaC | -0.8 | -1.9 | L-ascorbate-specific enzyme IIA component of PTS (NCBI) | compare |
| b1690 | ydiM | -0.8 | -1.1 | predicted transporter (NCBI) | compare |
| b3728 | pstS | -0.8 | -1.6 | phosphate transporter subunit (NCBI) | compare |
| b0125 | hpt | -0.8 | -2.8 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b4181 | yjfI | -0.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b1235 | rssB | -0.8 | -3.2 | response regulator of RpoS (NCBI) | compare |
| b4410 | ecnA | -0.8 | -1.1 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b0953 | rmf | -0.8 | -1.7 | ribosome modulation factor (NCBI) | compare |
| b3933 | ftsN | -0.8 | -4.9 | essential cell division protein (NCBI) | compare |
| b3107 | yhaL | -0.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1558 | cspF | -0.8 | -2.2 | Qin prophage; cold shock protein (NCBI) | compare |
| b3811 | xerC | -0.8 | -0.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0082 | mraW | -0.7 | -1.8 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4481 | rffT | -0.7 | -3.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2398 | yfeC | -0.7 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b1351 | racC | -0.7 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b4648 | ysaC | -0.7 | -2.4 | no description | compare |
| b4313 | fimE | -0.7 | -4.6 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b2814 | metZ | -0.7 | -1.1 | tRNA-Met (NCBI) | compare |
| b3035 | tolC | -0.7 | -3.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3863 | polA | -0.7 | -0.7 | DNA polymerase I (NCBI) | compare |
| b1847 | yebF | -0.7 | -1.1 | predicted protein (RefSeq) | compare |
| b4640 | yoeG | -0.7 | -1.6 | no description | compare |
| b1153 | ymfQ | -0.7 | -1.5 | e14 prophage; conserved protein (NCBI) | compare |
| b1103 | ycfF | -0.7 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b2314 | dedD | -0.7 | -2.2 | putative lipoprotein (VIMSS) | compare |
| b0432 | cyoA | -0.7 | -4.6 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b2080 | b2080 | -0.7 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0908 | aroA | -0.7 | -3.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1205 | ychH | -0.7 | -1.2 | predicted inner membrane protein (NCBI) | compare |
| b0247 | ykfG | -0.7 | -1.1 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b4191 | ulaR | -0.7 | -1.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2501 | ppk | -0.7 | -3.6 | polyphosphate kinase (NCBI) | compare |
| b3229 | sspA | -0.7 | -1.7 | stringent starvation protein A (NCBI) | compare |
| b0957 | ompA | -0.7 | -2.4 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4418 | sraB | -0.7 | -1.3 | unknown RNA (NCBI) | compare |
| b2111 | yehD | -0.7 | -1.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1536 | ydeI | -0.7 | -0.4 | hypothetical protein (NCBI) | compare |