| | gene | name | fitness | t score | description | |
|---|
| b2168 | fruK | -3.2 | -2.2 | 1-phosphofructokinase (NCBI) | compare |
| b1291 | sapD | -2.9 | -2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3390 | aroK | -2.6 | -2.5 | shikimate kinase I (NCBI) | compare |
| b4593 | ymgI | -2.5 | -1.7 | hypothetical protein (RefSeq) | compare |
| b0049 | apaH | -2.4 | -2.3 | diadenosinetetraphosphatase (NCBI) | compare |
| b3021 | ygiT | -2.3 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0053 | surA | -2.2 | -4.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1103 | ycfF | -2.1 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1850 | eda | -2.1 | -3.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1185 | dsbB | -2.0 | -4.1 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2318 | truA | -1.9 | -3.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1292 | sapC | -1.8 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4520 | ymgF | -1.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b2276 | nuoN | -1.7 | -5.4 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1860 | ruvB | -1.7 | -1.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b3863 | polA | -1.7 | -1.1 | DNA polymerase I (NCBI) | compare |
| b1161 | ycgX | -1.6 | -0.9 | hypothetical protein (NCBI) | compare |
| b1863 | ruvC | -1.5 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b1361 | ydaW | -1.4 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2287 | nuoB | -1.4 | -3.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1847 | yebF | -1.4 | -1.4 | predicted protein (RefSeq) | compare |
| b3183 | obgE | -1.3 | -1.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0737 | tolQ | -1.3 | -2.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1506 | yneL | -1.3 | -2.0 | predicted transcriptional regulator (NCBI) | compare |
| b0564 | appY | -1.3 | -1.3 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3977 | tyrU | -1.3 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b3781 | trxA | -1.3 | -3.5 | thioredoxin 1 (VIMSS) | compare |
| b2284 | nuoF | -1.3 | -4.2 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1235 | rssB | -1.3 | -4.5 | response regulator of RpoS (NCBI) | compare |
| b0438 | clpX | -1.3 | -5.5 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b4179 | vacB | -1.3 | -4.9 | putative enzyme (VIMSS) | compare |
| b4202 | rpsR | -1.3 | -1.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b0740 | tolB | -1.3 | -3.2 | translocation protein TolB precursor (NCBI) | compare |
| b3860 | dsbA | -1.3 | -6.2 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b2498 | upp | -1.2 | -2.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3916 | pfkA | -1.2 | -1.6 | 6-phosphofructokinase (NCBI) | compare |
| b0890 | ftsK | -1.2 | -1.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2935 | tktA | -1.2 | -1.3 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1765 | ydjA | -1.2 | -0.8 | predicted oxidoreductase (NCBI) | compare |
| b1465 | narV | -1.2 | -2.2 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b3493 | pitA | -1.2 | -5.0 | phosphate transporter, low-affinity (NCBI) | compare |
| b0741 | pal | -1.1 | -2.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0706 | ybfD | -1.1 | -1.9 | hypothetical protein (NCBI) | compare |
| b3169 | nusA | -1.1 | -2.0 | transcription elongation factor NusA (NCBI) | compare |
| b1293 | sapB | -1.1 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0080 | fruR | -1.1 | -4.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3728 | pstS | -1.1 | -1.9 | phosphate transporter subunit (NCBI) | compare |
| b1258 | yciF | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b3613 | yibP | -1.1 | -2.2 | putative membrane protein (VIMSS) | compare |
| b0018 | mokC | -1.1 | -1.4 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b2906 | visC | -1.1 | -4.2 | hypothetical protein (NCBI) | compare |
| b2285 | nuoE | -1.1 | -1.9 | NADH dehydrogenase subunit E (NCBI) | compare |
| b4613 | dinQ | -1.1 | -1.7 | Damage inducible, function unknown (RefSeq) | compare |
| b2280 | nuoJ | -1.1 | -3.5 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2699 | recA | -1.1 | -0.7 | recombinase A (NCBI) | compare |
| b1524 | yneH | -1.0 | -1.0 | predicted glutaminase (NCBI) | compare |
| b1648 | b1648 | -1.0 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3619 | rfaD | -1.0 | -2.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2288 | nuoA | -1.0 | -1.6 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2808 | gcvA | -1.0 | -2.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3778 | rep | -1.0 | -4.7 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b0238 | gpt | -1.0 | -2.5 | xanthine phosphoribosyltransferase (NCBI) | compare |
| b2809 | b2809 | -0.9 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1493 | gadB | -0.9 | -0.7 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b0806 | ybiM | -0.9 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1358 | ydaT | -0.9 | -1.4 | Rac prophage; predicted protein (NCBI) | compare |
| b1482 | osmC | -0.9 | -1.8 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0167 | glnD | -0.9 | -3.1 | PII uridylyl-transferase (NCBI) | compare |
| b0439 | lon | -0.9 | -3.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3026 | qseC | -0.9 | -1.9 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0920 | ycbC | -0.9 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b4503 | yafF | -0.9 | -0.8 | no description | compare |
| b3629 | rfaS | -0.9 | -2.8 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1461 | ydcE | -0.9 | -2.4 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b2283 | nuoG | -0.9 | -3.6 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1855 | lpxM | -0.9 | -2.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2277 | nuoM | -0.9 | -3.4 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3341 | rpsG | -0.8 | -0.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b3811 | xerC | -0.8 | -0.6 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2024 | hisA | -0.8 | -1.8 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b3427 | yzgL | -0.8 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -0.8 | -2.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0822 | ybiV | -0.8 | -2.9 | predicted hydrolase (NCBI) | compare |
| b1811 | yoaH | -0.8 | -1.6 | hypothetical protein (NCBI) | compare |
| b1429 | tehA | -0.8 | -1.0 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3621 | rfaC | -0.8 | -2.8 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0200 | gmhB | -0.8 | -0.7 | hypothetical protein (NCBI) | compare |
| b3188 | sfsB | -0.8 | -1.9 | DNA-binding transcriptional activator of maltose metabolism (NCBI) | compare |
| b2313 | cvpA | -0.8 | -3.7 | membrane protein required for colicin V production (NCBI) | compare |
| b2281 | nuoI | -0.8 | -2.1 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1248 | b1248 | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2058 | wcaB | -0.8 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b1558 | cspF | -0.8 | -2.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b1573 | ydfC | -0.8 | -1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b4375 | prfC | -0.8 | -2.7 | peptide chain release factor 3 (NCBI) | compare |
| b0019 | nhaA | -0.8 | -4.4 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b0677 | nagA | -0.8 | -2.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3806 | cyaA | -0.8 | -2.9 | adenylate cyclase (NCBI) | compare |
| b4414 | tff | -0.8 | -2.1 | unknown RNA (NCBI) | compare |
| b0724 | sdhB | -0.7 | -3.8 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1963 | b1963 | -0.7 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4063 | soxR | -0.7 | -3.3 | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) | compare |
| b4608 | ryfC | -0.7 | -2.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b3236 | mdh | -0.7 | -3.7 | malate dehydrogenase (NCBI) | compare |
| b3726 | pstA | -0.7 | -2.6 | phosphate transporter subunit (NCBI) | compare |
| b2948 | yqgE | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1692 | ydiB | -0.7 | -1.9 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b2286 | nuoC | -0.7 | -2.5 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3438 | gntR | -0.7 | -3.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0340 | cynS | -0.7 | -1.0 | cyanate hydratase (NCBI) | compare |
| b3162 | deaD | -0.7 | -2.4 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1058 | yceO | -0.7 | -0.3 | hypothetical protein (NCBI) | compare |
| b4509 | ylcG | -0.7 | -2.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0580 | ybdJ | -0.7 | -1.5 | predicted inner membrane protein (NCBI) | compare |
| b1882 | cheY | -0.7 | -0.4 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2376 | ypdI | -0.7 | -2.1 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b2330 | yfcB | -0.7 | -1.1 | putative adenine-specific methylase (VIMSS) | compare |
| b2704 | srlB | -0.7 | -1.7 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0928 | aspC | -0.7 | -3.0 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b4319 | fimG | -0.7 | -4.7 | minor component of type 1 fimbriae (NCBI) | compare |
| b3870 | glnA | -0.7 | -1.5 | glutamine synthetase (NCBI) | compare |
| b4529 | ydbJ | -0.7 | -0.8 | hypothetical protein (NCBI) | compare |
| b1548 | nohA | -0.7 | -1.2 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b0437 | clpP | -0.7 | -2.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1183 | umuD | -0.7 | -0.9 | DNA polymerase V, subunit D (NCBI) | compare |
| b4025 | pgi | -0.7 | -3.6 | glucose-6-phosphate isomerase (NCBI) | compare |
| b0505 | allA | -0.7 | -1.9 | ureidoglycolate hydrolase (NCBI) | compare |
| b0738 | tolR | -0.7 | -1.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3198 | kdsC | -0.7 | -1.5 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3962 | udhA | -0.7 | -3.0 | putative oxidoreductase (VIMSS) | compare |
| b1252 | tonB | -0.6 | -1.4 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0676 | nagC | -0.6 | -3.2 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b0720 | gltA | -0.6 | -3.1 | citrate synthase (NCBI) | compare |
| b4418 | sraB | -0.6 | -1.3 | unknown RNA (NCBI) | compare |
| b1572 | ydfB | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1514 | lsrC | -0.6 | -1.2 | AI2 transporter (NCBI) | compare |
| b4596 | yciZ | -0.6 | -1.1 | hypothetical protein (RefSeq) | compare |
| b2279 | nuoK | -0.6 | -1.2 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0619 | citA | -0.6 | -3.0 | sensory histidine kinase in two-component regulatory system with citB (NCBI) | compare |
| b2504 | yfgG | -0.6 | -1.0 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b2722 | hycD | -0.6 | -2.3 | hydrogenase 3, membrane subunit (NCBI) | compare |
| b3836 | b3836 | -0.6 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4402 | yjjY | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b4215 | ytfI | -0.6 | -0.9 | hypothetical protein (NCBI) | compare |
| b2959 | yggL | -0.6 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1382 | ynbE | -0.6 | -0.9 | predicted lipoprotein (NCBI) | compare |
| b2363 | yfdT | -0.6 | -1.3 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0232 | yafN | -0.6 | -0.4 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1261 | trpB | -0.6 | -1.8 | tryptophan synthase subunit beta (NCBI) | compare |
| b0858 | ybjO | -0.6 | -1.4 | predicted inner membrane protein (NCBI) | compare |
| b3094 | exuR | -0.6 | -1.9 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b1330 | ynaI | -0.6 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b2915 | yqfE | -0.6 | -1.5 | hypothetical protein (RefSeq) | compare |
| b1658 | purR | -0.6 | -1.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b0721 | sdhC | -0.6 | -1.7 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3652 | recG | -0.6 | -3.3 | ATP-dependent DNA helicase (NCBI) | compare |
| b1160 | elbA | -0.6 | -0.5 | hypothetical protein (NCBI) | compare |
| b4246 | pyrL | -0.6 | -1.3 | pyrBI operon leader peptide (NCBI) | compare |
| b0735 | ybgE | -0.6 | -1.9 | conserved inner membrane protein (NCBI) | compare |
| b4407 | thiS | -0.6 | -0.7 | sulfur carrier protein ThiS (NCBI) | compare |
| b0728 | sucC | -0.6 | -2.7 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1084 | rne | -0.6 | -2.2 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2061 | wzb | -0.6 | -1.3 | protein-tyrosine phosphatase (NCBI) | compare |
| b2646 | ypjF | -0.6 | -1.1 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b3134 | agaW | -0.6 | -1.9 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) | compare |
| b1351 | racC | -0.6 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b1219 | ychN | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b0946 | ycbW | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4104 | phnE | -0.6 | -1.5 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b2309 | hisJ | -0.6 | -1.8 | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | compare |
| b0953 | rmf | -0.6 | -1.6 | ribosome modulation factor (NCBI) | compare |
| b2278 | nuoL | -0.6 | -3.0 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4317 | fimD | -0.6 | -5.0 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b3204 | ptsN | -0.5 | -1.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1399 | paaX | -0.5 | -2.1 | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI) | compare |
| b3451 | ugpE | -0.5 | -1.7 | glycerol-3-phosphate transporter subunit (NCBI) | compare |
| b4146 | yjeK | -0.5 | -0.9 | predicted lysine aminomutase (NCBI) | compare |
| b1176 | minC | -0.5 | -1.4 | septum formation inhibitor (NCBI) | compare |
| b0297 | eaeH | -0.5 | -2.4 | attaching and effacing protein, pathogenesis factor (RefSeq) | compare |
| b0550 | rusA | -0.5 | -1.1 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b3889 | yiiE | -0.5 | -1.1 | predicted transcriptional regulator (RefSeq) | compare |
| b1040 | csgD | -0.5 | -0.6 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1486 | ddpB | -0.5 | -1.6 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1353 | sieB | -0.5 | -2.6 | phage superinfection exclusion protein (VIMSS) | compare |
| b4505 | insX | -0.5 | -0.9 | predicted IS protein (RefSeq) | compare |
| b4571 | wbbL | -0.5 | -1.1 | no description | compare |
| b1569 | dicC | -0.5 | -1.4 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b1679 | sufE | -0.5 | -1.4 | cysteine desufuration protein SufE (NCBI) | compare |
| b3098 | yqjD | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b1214 | ychA | -0.5 | -2.2 | predicted transcriptional regulator (NCBI) | compare |
| b3500 | gor | -0.5 | -0.7 | glutathione reductase (NCBI) | compare |
| b0723 | sdhA | -0.5 | -3.6 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b3626 | rfaJ | -0.5 | -2.0 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b1478 | adhP | -0.5 | -1.8 | alcohol dehydrogenase (VIMSS) | compare |
| b2080 | b2080 | -0.5 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3414 | gntY | -0.5 | -1.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b4345 | mcrC | -0.5 | -0.5 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b1516 | lsrB | -0.5 | -1.3 | AI2 transporter (NCBI) | compare |
| b4011 | yjaA | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b3849 | trkH | -0.5 | -3.3 | potassium transporter (NCBI) | compare |