| | gene | name | fitness | t score | description | |
|---|
| b2620 | smpB | -3.6 | -2.4 | SsrA-binding protein (NCBI) | compare |
| b0053 | surA | -3.5 | -2.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1361 | ydaW | -3.3 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0683 | fur | -3.1 | -1.7 | ferric uptake regulator (NCBI) | compare |
| b0737 | tolQ | -2.7 | -4.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3341 | rpsG | -2.5 | -1.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b3500 | gor | -2.4 | -2.3 | glutathione reductase (NCBI) | compare |
| b2576 | srmB | -2.3 | -4.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b0200 | gmhB | -2.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b2699 | recA | -2.2 | -1.5 | recombinase A (NCBI) | compare |
| b1730 | ydjO | -2.2 | -1.4 | predicted protein (RefSeq) | compare |
| b1860 | ruvB | -2.1 | -1.8 | Holliday junction DNA helicase B (NCBI) | compare |
| b1332 | ynaJ | -2.1 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b4593 | ymgI | -2.0 | -1.4 | hypothetical protein (RefSeq) | compare |
| b1291 | sapD | -2.0 | -2.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2279 | nuoK | -1.9 | -2.1 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2935 | tktA | -1.8 | -2.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2289 | lrhA | -1.7 | -8.6 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b2330 | yfcB | -1.7 | -2.2 | putative adenine-specific methylase (VIMSS) | compare |
| b2528 | iscA | -1.6 | -1.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3162 | deaD | -1.6 | -3.9 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3863 | polA | -1.6 | -1.5 | DNA polymerase I (NCBI) | compare |
| b3082 | ygjM | -1.6 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4647 | mokA | -1.5 | -1.1 | no description | compare |
| b0740 | tolB | -1.5 | -4.4 | translocation protein TolB precursor (NCBI) | compare |
| b0232 | yafN | -1.5 | -0.9 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2820 | recB | -1.5 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b4402 | yjjY | -1.5 | -1.2 | hypothetical protein (NCBI) | compare |
| b3816 | corA | -1.5 | -6.7 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b3621 | rfaC | -1.5 | -5.6 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0890 | ftsK | -1.4 | -3.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3916 | pfkA | -1.4 | -2.9 | 6-phosphofructokinase (NCBI) | compare |
| b1855 | lpxM | -1.4 | -4.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1286 | rnb | -1.4 | -2.3 | exoribonuclease II (NCBI) | compare |
| b2569 | lepA | -1.4 | -3.5 | GTP-binding protein LepA (NCBI) | compare |
| b2168 | fruK | -1.3 | -1.4 | 1-phosphofructokinase (NCBI) | compare |
| b2939 | yqgB | -1.3 | -1.7 | predicted protein (RefSeq) | compare |
| b1765 | ydjA | -1.3 | -1.2 | predicted oxidoreductase (NCBI) | compare |
| b1293 | sapB | -1.3 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0222 | lpcA | -1.3 | -1.6 | phosphoheptose isomerase (NCBI) | compare |
| b3839 | tatC | -1.3 | -4.0 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2567 | rnc | -1.3 | -0.8 | ribonuclease III (NCBI) | compare |
| b3706 | trmE | -1.3 | -4.3 | tRNA modification GTPase (NCBI) | compare |
| b3026 | qseC | -1.2 | -3.5 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1346 | ydaQ | -1.2 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3613 | yibP | -1.2 | -3.3 | putative membrane protein (VIMSS) | compare |
| b3405 | ompR | -1.2 | -3.9 | osmolarity response regulator (NCBI) | compare |
| b4201 | priB | -1.2 | -2.9 | primosomal replication protein N (NCBI) | compare |
| b3205 | yhbJ | -1.2 | -4.4 | hypothetical protein (NCBI) | compare |
| b3778 | rep | -1.2 | -4.8 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b0439 | lon | -1.1 | -3.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0630 | lipB | -1.1 | -1.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1347 | ydaC | -1.1 | -0.6 | Rac prophage; predicted protein (NCBI) | compare |
| b1540 | ydfH | -1.1 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1575 | dicB | -1.1 | -1.2 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b4042 | dgkA | -1.1 | -2.1 | diacylglycerol kinase (NCBI) | compare |
| b4172 | hfq | -1.1 | -0.7 | RNA-binding protein Hfq (NCBI) | compare |
| b3002 | yqhA | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.1 | -3.2 | glucose-inhibited division protein A (NCBI) | compare |
| b2110 | yehC | -1.0 | -1.0 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b1292 | sapC | -1.0 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3935 | priA | -1.0 | -2.6 | primosome assembly protein PriA (NCBI) | compare |
| b3609 | secB | -1.0 | -2.6 | export protein SecB (NCBI) | compare |
| b3052 | rfaE | -1.0 | -3.2 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1951 | rcsA | -1.0 | -1.5 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b2278 | nuoL | -1.0 | -5.3 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4631 | ykgQ | -1.0 | -1.0 | no description | compare |
| b3870 | glnA | -1.0 | -2.8 | glutamine synthetase (NCBI) | compare |
| b0741 | pal | -1.0 | -2.4 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1863 | ruvC | -1.0 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b1594 | dgsA | -1.0 | -3.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2114 | metG | -1.0 | -1.9 | methionyl-tRNA synthetase (NCBI) | compare |
| b0437 | clpP | -1.0 | -3.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0767 | ybhE | -1.0 | -2.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b3792 | wzxE | -0.9 | -4.5 | O-antigen translocase (NCBI) | compare |
| b3183 | obgE | -0.9 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1936 | intG | -0.9 | -0.9 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0784 | moaD | -0.9 | -2.4 | molybdopterin synthase, small subunit (NCBI) | compare |
| b3426 | glpD | -0.9 | -2.8 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2277 | nuoM | -0.9 | -3.4 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1129 | phoQ | -0.9 | -1.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b3619 | rfaD | -0.9 | -3.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1804 | rnd | -0.9 | -3.2 | ribonuclease D (NCBI) | compare |
| b0082 | mraW | -0.9 | -2.5 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0888 | trxB | -0.9 | -1.7 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3545 | proK | -0.9 | -1.9 | tRNA-Pro (NCBI) | compare |
| b2830 | nudH | -0.9 | -1.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2343 | b2343 | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1503 | ydeR | -0.9 | -2.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0471 | ybaB | -0.9 | -2.7 | hypothetical protein (NCBI) | compare |
| b1360 | ydaV | -0.9 | -2.7 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b0049 | apaH | -0.8 | -1.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b2250 | b2250 | -0.8 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3120 | yhaB | -0.8 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2286 | nuoC | -0.8 | -2.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3620 | rfaF | -0.8 | -2.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1824 | yobF | -0.8 | -2.9 | hypothetical protein (NCBI) | compare |
| b4179 | vacB | -0.8 | -3.6 | putative enzyme (VIMSS) | compare |
| b1426 | ydcH | -0.8 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2822 | recC | -0.8 | -3.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0739 | tolA | -0.8 | -2.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2283 | nuoG | -0.8 | -3.4 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3204 | ptsN | -0.8 | -2.8 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3842 | rfaH | -0.8 | -3.1 | transcriptional activator RfaH (NCBI) | compare |
| b3781 | trxA | -0.8 | -2.4 | thioredoxin 1 (VIMSS) | compare |
| b1182 | hlyE | -0.8 | -0.5 | hemolysin E (VIMSS) | compare |
| b4653 | yicT | -0.8 | -1.7 | no description | compare |
| b2061 | wzb | -0.8 | -1.7 | protein-tyrosine phosphatase (NCBI) | compare |
| b1754 | b1754 | -0.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1533 | ydeD | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3398 | yrfF | -0.8 | -2.5 | predicted inner membrane protein (NCBI) | compare |
| b2007 | yeeX | -0.7 | -1.0 | conserved protein (RefSeq) | compare |
| b1159 | mcrA | -0.7 | -1.0 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b3728 | pstS | -0.7 | -2.1 | phosphate transporter subunit (NCBI) | compare |
| b1861 | ruvA | -0.7 | -0.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0051 | ksgA | -0.7 | -2.1 | dimethyladenosine transferase (NCBI) | compare |
| b4177 | purA | -0.7 | -0.9 | adenylosuccinate synthetase (NCBI) | compare |
| b4453 | ldrD | -0.7 | -1.2 | toxic polypeptide, small (NCBI) | compare |
| b2082 | ogrK | -0.7 | -1.1 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b0850 | ybjC | -0.7 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b4511 | ybdZ | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b3844 | fre | -0.7 | -3.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b4535 | yniD | -0.7 | -1.0 | predicted protein (RefSeq) | compare |
| b4191 | ulaR | -0.7 | -1.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2258 | b2258 | -0.7 | -0.9 | putative transport/receptor protein (VIMSS) | compare |
| b3169 | nusA | -0.7 | -1.4 | transcription elongation factor NusA (NCBI) | compare |
| b0858 | ybjO | -0.7 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b1942 | fliJ | -0.7 | -1.1 | flagellar biosynthesis chaperone (NCBI) | compare |
| b2597 | yfiA | -0.7 | -1.3 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b3811 | xerC | -0.7 | -0.8 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3860 | dsbA | -0.7 | -3.6 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0564 | appY | -0.7 | -0.9 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b4414 | tff | -0.7 | -0.8 | unknown RNA (NCBI) | compare |
| b2906 | visC | -0.7 | -3.0 | hypothetical protein (NCBI) | compare |
| b0560 | nohB | -0.7 | -1.1 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1185 | dsbB | -0.7 | -1.6 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b4375 | prfC | -0.7 | -2.6 | peptide chain release factor 3 (NCBI) | compare |
| b3198 | kdsC | -0.7 | -2.5 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b1130 | phoP | -0.7 | -1.4 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2642 | yfjW | -0.7 | -0.6 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2281 | nuoI | -0.7 | -1.0 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0080 | fruR | -0.7 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0624 | crcB | -0.7 | -2.4 | camphor resistance protein CrcB (NCBI) | compare |
| b1969 | yedW | -0.7 | -2.5 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b0018 | mokC | -0.6 | -0.8 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1175 | minD | -0.6 | -2.4 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1709 | btuD | -0.6 | -0.7 | vitamin B12-transporter ATPase (NCBI) | compare |
| b4698 | mgrR | -0.6 | -2.1 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b3021 | ygiT | -0.6 | -0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1269 | rluB | -0.6 | -1.5 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b2318 | truA | -0.6 | -1.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2282 | nuoH | -0.6 | -1.2 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2363 | yfdT | -0.6 | -1.6 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0142 | folK | -0.6 | -0.4 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4203 | rplI | -0.6 | -1.9 | 50S ribosomal protein L9 (NCBI) | compare |
| b0802 | ybiJ | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b4613 | dinQ | -0.6 | -1.0 | Damage inducible, function unknown (RefSeq) | compare |
| b2635 | ypjK | -0.6 | -1.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3226 | yhcK | -0.6 | -2.2 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b2940 | yqgC | -0.6 | -2.5 | hypothetical protein (NCBI) | compare |
| b1160 | elbA | -0.6 | -0.9 | hypothetical protein (NCBI) | compare |
| b4146 | yjeK | -0.6 | -1.3 | predicted lysine aminomutase (NCBI) | compare |
| b2432 | yfeY | -0.6 | -1.7 | hypothetical protein (NCBI) | compare |
| b1290 | sapF | -0.6 | -0.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0937 | ssuE | -0.6 | -1.0 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b3806 | cyaA | -0.6 | -2.7 | adenylate cyclase (NCBI) | compare |
| b1257 | yciE | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b4106 | phnC | -0.6 | -2.3 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b4701 | sokX | -0.6 | -0.4 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4458 | oxyS | -0.6 | -0.7 | global regulatory RNA (NCBI) | compare |
| b3726 | pstA | -0.6 | -1.7 | phosphate transporter subunit (NCBI) | compare |
| b0783 | moaC | -0.6 | -2.4 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b1877 | yecT | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3493 | pitA | -0.6 | -2.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b3838 | tatB | -0.6 | -2.4 | sec-independent translocase (NCBI) | compare |
| b1104 | ycfL | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b1259 | yciG | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0746 | valZ | -0.6 | -1.3 | tRNA-Val (NCBI) | compare |
| b2897 | ygfY | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b0627 | tatE | -0.6 | -1.3 | twin arginine translocase protein E (NCBI) | compare |
| b0623 | cspE | -0.5 | -1.0 | cold shock protein E (NCBI) | compare |
| b1812 | pabB | -0.5 | -2.6 | para-aminobenzoate synthase component I (NCBI) | compare |
| b4180 | rlmB | -0.5 | -2.9 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b3210 | arcB | -0.5 | -2.8 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2586 | yfiM | -0.5 | -1.3 | predicted protein (RefSeq) | compare |
| b3623 | rfaK | -0.5 | -1.4 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b4513 | kdpF | -0.5 | -0.8 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2356 | yfdM | -0.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1921 | fliZ | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0912 | ihfB | -0.5 | -1.6 | integration host factor subunit beta (NCBI) | compare |
| b3148 | yraN | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b0778 | bioD | -0.5 | -2.1 | dethiobiotin synthetase (NCBI) | compare |
| b2809 | b2809 | -0.5 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0014 | dnaK | -0.5 | -0.9 | molecular chaperone DnaK (NCBI) | compare |
| b1712 | ihfA | -0.5 | -0.8 | integration host factor subunit alpha (NCBI) | compare |
| b1658 | purR | -0.5 | -2.2 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1708 | nlpC | -0.5 | -2.4 | predicted lipoprotein (NCBI) | compare |
| b1161 | ycgX | -0.5 | -0.7 | hypothetical protein (NCBI) | compare |
| b1946 | fliN | -0.5 | -2.0 | flagellar motor switch protein (NCBI) | compare |
| b4451 | ryhB | -0.5 | -0.4 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |