| | gene | name | fitness | t score | description | |
|---|
| b2279 | nuoK | -3.4 | -4.1 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1291 | sapD | -2.6 | -3.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1860 | ruvB | -2.4 | -1.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b0232 | yafN | -2.2 | -1.2 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0053 | surA | -2.2 | -9.3 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3811 | xerC | -2.2 | -2.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2935 | tktA | -2.1 | -3.2 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2318 | truA | -2.1 | -4.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0890 | ftsK | -2.1 | -5.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2699 | recA | -2.0 | -1.9 | recombinase A (NCBI) | compare |
| b1861 | ruvA | -1.9 | -1.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3613 | yibP | -1.9 | -5.5 | putative membrane protein (VIMSS) | compare |
| b0142 | folK | -1.9 | -1.0 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1286 | rnb | -1.8 | -3.7 | exoribonuclease II (NCBI) | compare |
| b2287 | nuoB | -1.8 | -4.3 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0741 | pal | -1.8 | -4.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2569 | lepA | -1.7 | -5.3 | GTP-binding protein LepA (NCBI) | compare |
| b0738 | tolR | -1.7 | -4.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0114 | aceE | -1.7 | -1.2 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b3183 | obgE | -1.7 | -2.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2277 | nuoM | -1.7 | -8.0 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2284 | nuoF | -1.6 | -5.2 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b3839 | tatC | -1.6 | -7.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1863 | ruvC | -1.6 | -2.8 | Holliday junction resolvase (NCBI) | compare |
| b2286 | nuoC | -1.5 | -4.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0630 | lipB | -1.5 | -2.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2830 | nudH | -1.5 | -1.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4676 | yoaK | -1.5 | -1.1 | expressed protein (RefSeq) | compare |
| b2278 | nuoL | -1.5 | -8.5 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4593 | ymgI | -1.5 | -1.0 | hypothetical protein (RefSeq) | compare |
| b2283 | nuoG | -1.5 | -7.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3181 | greA | -1.5 | -6.7 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0739 | tolA | -1.4 | -4.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2276 | nuoN | -1.4 | -4.7 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0740 | tolB | -1.4 | -5.0 | translocation protein TolB precursor (NCBI) | compare |
| b0683 | fur | -1.4 | -2.0 | ferric uptake regulator (NCBI) | compare |
| b1185 | dsbB | -1.4 | -2.8 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1677 | lpp | -1.4 | -2.1 | murein lipoprotein (NCBI) | compare |
| b2820 | recB | -1.3 | -1.5 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3741 | gidA | -1.3 | -5.7 | glucose-inhibited division protein A (NCBI) | compare |
| b4239 | treC | -1.3 | -2.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b1550 | b1550 | -1.3 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4146 | yjeK | -1.3 | -3.4 | predicted lysine aminomutase (NCBI) | compare |
| b2894 | xerD | -1.3 | -1.2 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3426 | glpD | -1.2 | -4.1 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b4535 | yniD | -1.2 | -1.4 | predicted protein (RefSeq) | compare |
| b3838 | tatB | -1.2 | -5.6 | sec-independent translocase (NCBI) | compare |
| b1613 | manA | -1.2 | -2.6 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3290 | trkA | -1.2 | -2.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2285 | nuoE | -1.2 | -2.5 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0222 | lpcA | -1.2 | -3.1 | phosphoheptose isomerase (NCBI) | compare |
| b0688 | pgm | -1.2 | -3.9 | phosphoglucomutase (NCBI) | compare |
| b0729 | sucD | -1.2 | -5.2 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b2288 | nuoA | -1.2 | -3.5 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0737 | tolQ | -1.2 | -2.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1607 | ydgC | -1.1 | -1.1 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2188 | yejM | -1.1 | -7.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b4702 | mgtL | -1.1 | -2.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2282 | nuoH | -1.1 | -3.4 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1176 | minC | -1.1 | -3.4 | septum formation inhibitor (NCBI) | compare |
| b0049 | apaH | -1.1 | -2.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b1850 | eda | -1.1 | -2.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0722 | sdhD | -1.1 | -4.0 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b3261 | fis | -1.0 | -2.5 | DNA-binding protein Fis (NCBI) | compare |
| b2297 | pta | -1.0 | -0.9 | phosphate acetyltransferase (NCBI) | compare |
| b3916 | pfkA | -1.0 | -3.0 | 6-phosphofructokinase (NCBI) | compare |
| b2280 | nuoJ | -1.0 | -3.3 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0439 | lon | -1.0 | -4.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3619 | rfaD | -1.0 | -4.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1084 | rne | -1.0 | -3.6 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1281 | pyrF | -1.0 | -1.9 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b0721 | sdhC | -1.0 | -4.1 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b4066 | yjcF | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -1.0 | -3.7 | tRNA modification GTPase (NCBI) | compare |
| b1334 | fnr | -1.0 | -3.2 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0438 | clpX | -1.0 | -5.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0033 | carB | -1.0 | -7.4 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2912 | ygfA | -1.0 | -2.7 | putative ligase (VIMSS) | compare |
| b0728 | sucC | -1.0 | -5.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2620 | smpB | -1.0 | -1.3 | SsrA-binding protein (NCBI) | compare |
| b3778 | rep | -1.0 | -5.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2281 | nuoI | -1.0 | -2.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3405 | ompR | -0.9 | -4.2 | osmolarity response regulator (NCBI) | compare |
| b0726 | sucA | -0.9 | -3.4 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0677 | nagA | -0.9 | -3.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4202 | rpsR | -0.9 | -2.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b3792 | wzxE | -0.9 | -5.2 | O-antigen translocase (NCBI) | compare |
| b1480 | sra | -0.9 | -1.4 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b2424 | cysU | -0.9 | -2.7 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b0437 | clpP | -0.9 | -4.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3725 | pstB | -0.9 | -0.6 | phosphate transporter subunit (NCBI) | compare |
| b0720 | gltA | -0.9 | -4.0 | citrate synthase (NCBI) | compare |
| b1382 | ynbE | -0.9 | -1.5 | predicted lipoprotein (NCBI) | compare |
| b1434 | ydcN | -0.9 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2531 | iscR | -0.9 | -1.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1292 | sapC | -0.9 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3860 | dsbA | -0.9 | -4.9 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3816 | corA | -0.9 | -6.2 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b4699 | fnrS | -0.9 | -0.8 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1429 | tehA | -0.9 | -1.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b2528 | iscA | -0.9 | -2.1 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3386 | rpe | -0.9 | -0.8 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b1855 | lpxM | -0.9 | -3.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2501 | ppk | -0.8 | -5.1 | polyphosphate kinase (NCBI) | compare |
| b0724 | sdhB | -0.8 | -4.2 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b4163 | glyV | -0.8 | -1.0 | tRNA-Gly (NCBI) | compare |
| b2168 | fruK | -0.8 | -1.2 | 1-phosphofructokinase (NCBI) | compare |
| b0888 | trxB | -0.8 | -2.9 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3236 | mdh | -0.8 | -5.0 | malate dehydrogenase (NCBI) | compare |
| b2567 | rnc | -0.8 | -1.1 | ribonuclease III (NCBI) | compare |
| b2082 | ogrK | -0.8 | -1.2 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b4472 | yhdP | -0.8 | -7.1 | conserved membrane protein, predicted transporter (NCBI) | compare |
| b3642 | pyrE | -0.8 | -2.8 | orotate phosphoribosyltransferase (NCBI) | compare |
| b0032 | carA | -0.8 | -4.4 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b1777 | b1777 | -0.8 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1062 | pyrC | -0.8 | -4.3 | dihydroorotase (NCBI) | compare |
| b4172 | hfq | -0.8 | -0.7 | RNA-binding protein Hfq (NCBI) | compare |
| b3621 | rfaC | -0.8 | -4.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0723 | sdhA | -0.8 | -5.5 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b4414 | tff | -0.8 | -2.0 | unknown RNA (NCBI) | compare |
| b2822 | recC | -0.8 | -3.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4521 | ycgI | -0.8 | -2.4 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | -0.8 | -2.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b3387 | dam | -0.8 | -6.0 | DNA adenine methylase (NCBI) | compare |
| b4179 | vacB | -0.8 | -3.4 | putative enzyme (VIMSS) | compare |
| b1105 | ycfM | -0.7 | -2.2 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1236 | galU | -0.7 | -3.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3620 | rfaF | -0.7 | -3.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2707 | srlR | -0.7 | -3.6 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b1175 | minD | -0.7 | -3.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b4375 | prfC | -0.7 | -3.6 | peptide chain release factor 3 (NCBI) | compare |
| b3636 | rpmG | -0.7 | -1.1 | 50S ribosomal protein L33 (NCBI) | compare |
| b3162 | deaD | -0.7 | -2.9 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4245 | pyrB | -0.7 | -4.4 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b0145 | dksA | -0.7 | -2.3 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1685 | ydiH | -0.7 | -1.2 | predicted protein (RefSeq) | compare |
| b0080 | fruR | -0.7 | -3.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1461 | ydcE | -0.7 | -1.6 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b0014 | dnaK | -0.7 | -1.5 | molecular chaperone DnaK (NCBI) | compare |
| b3727 | pstC | -0.7 | -3.7 | phosphate transporter subunit (NCBI) | compare |
| b1839 | yebY | -0.7 | -2.9 | hypothetical protein (NCBI) | compare |
| b2343 | b2343 | -0.7 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0623 | cspE | -0.7 | -1.7 | cold shock protein E (NCBI) | compare |
| b0234 | yafP | -0.7 | -1.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b2768 | ygcP | -0.7 | -2.7 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b1394 | paaG | -0.7 | -1.8 | enoyl-CoA hydratase (NCBI) | compare |
| b1235 | rssB | -0.7 | -4.0 | response regulator of RpoS (NCBI) | compare |
| b3844 | fre | -0.7 | -3.3 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3609 | secB | -0.7 | -2.5 | export protein SecB (NCBI) | compare |
| b0209 | yafD | -0.6 | -3.8 | hypothetical protein (NCBI) | compare |
| b0945 | pyrD | -0.6 | -4.2 | dihydroorotate dehydrogenase (NCBI) | compare |
| b4594 | ymgJ | -0.6 | -2.0 | hypothetical protein (RefSeq) | compare |
| b3414 | gntY | -0.6 | -3.2 | predicted gluconate transport associated protein (NCBI) | compare |
| b3250 | mreC | -0.6 | -0.8 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1192 | ldcA | -0.6 | -3.0 | L,D-carboxypeptidase A (NCBI) | compare |
| b0611 | rna | -0.6 | -3.4 | ribonuclease I (NCBI) | compare |
| b3842 | rfaH | -0.6 | -3.3 | transcriptional activator RfaH (NCBI) | compare |
| b1691 | ydiN | -0.6 | -2.7 | predicted transporter (RefSeq) | compare |
| b2906 | visC | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b4178 | yjeB | -0.6 | -2.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2512 | yfgL | -0.6 | -3.4 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0632 | dacA | -0.6 | -3.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3027 | ygiZ | -0.6 | -0.4 | conserved inner membrane protein (NCBI) | compare |
| b3867 | hemN | -0.6 | -4.6 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b0580 | ybdJ | -0.6 | -1.8 | predicted inner membrane protein (NCBI) | compare |
| b1658 | purR | -0.6 | -2.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b4655 | ythA | -0.6 | -1.1 | expressed protein (RefSeq) | compare |
| b3870 | glnA | -0.6 | -1.8 | glutamine synthetase (NCBI) | compare |
| b2393 | nupC | -0.6 | -4.1 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b1536 | ydeI | -0.6 | -0.7 | hypothetical protein (NCBI) | compare |
| b0450 | glnK | -0.6 | -1.7 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b0928 | aspC | -0.6 | -4.1 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3979 | thrT | -0.6 | -0.4 | tRNA-Thr (NCBI) | compare |
| b0989 | cspH | -0.6 | -1.6 | stress protein, member of the CspA-family (NCBI) | compare |
| b2635 | ypjK | -0.6 | -2.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0386 | proC | -0.6 | -2.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2044 | wcaL | -0.6 | -2.2 | predicted glycosyl transferase (NCBI) | compare |
| b1648 | b1648 | -0.6 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b4203 | rplI | -0.6 | -2.6 | 50S ribosomal protein L9 (NCBI) | compare |
| b2250 | b2250 | -0.6 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2814 | metZ | -0.6 | -1.1 | tRNA-Met (NCBI) | compare |
| b1936 | intG | -0.6 | -0.7 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3884 | yihW | -0.6 | -3.4 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b4001 | yjaH | -0.6 | -2.6 | hypothetical protein (NCBI) | compare |
| b1284 | yciT | -0.6 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1205 | ychH | -0.6 | -1.5 | predicted inner membrane protein (NCBI) | compare |
| b1818 | manY | -0.6 | -1.3 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1530 | marR | -0.6 | -2.4 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b3075 | ebgR | -0.5 | -3.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0937 | ssuE | -0.5 | -1.3 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b3849 | trkH | -0.5 | -4.0 | potassium transporter (NCBI) | compare |
| b4647 | mokA | -0.5 | -0.5 | no description | compare |
| b1679 | sufE | -0.5 | -2.1 | cysteine desufuration protein SufE (NCBI) | compare |
| b2977 | glcG | -0.5 | -2.0 | hypothetical protein (NCBI) | compare |
| b1573 | ydfC | -0.5 | -1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b3911 | cpxA | -0.5 | -4.2 | two-component sensor protein (NCBI) | compare |
| b1630 | rsxD | -0.5 | -2.6 | electron transport complex protein RnfD (NCBI) | compare |
| b0866 | ybjQ | -0.5 | -0.9 | hypothetical protein (NCBI) | compare |
| b2553 | glnB | -0.5 | -2.5 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |