| | gene | name | fitness | t score | description | |
|---|
| b3035 | tolC | -7.1 | -6.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b2531 | iscR | -6.7 | -4.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0759 | galE | -6.5 | -12.5 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b3839 | tatC | -5.4 | -10.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3628 | rfaB | -4.9 | -3.4 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3173 | yhbX | -4.4 | -31.3 | putative alkaline phosphatase I (VIMSS) | conserved |
| b3198 | kdsC | -4.1 | -6.1 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b4171 | miaA | -4.1 | -5.6 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2620 | smpB | -3.8 | -2.6 | SsrA-binding protein (NCBI) | compare |
| b1677 | lpp | -3.8 | -5.6 | murein lipoprotein (NCBI) | compare |
| b2188 | yejM | -3.7 | -11.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0738 | tolR | -3.1 | -5.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3261 | fis | -3.0 | -2.9 | DNA-binding protein Fis (NCBI) | compare |
| b3979 | thrT | -3.0 | -1.1 | tRNA-Thr (NCBI) | compare |
| b2318 | truA | -2.9 | -5.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2528 | iscA | -2.7 | -3.2 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0741 | pal | -2.7 | -6.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2830 | nudH | -2.7 | -2.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3183 | obgE | -2.7 | -2.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0740 | tolB | -2.6 | -6.5 | translocation protein TolB precursor (NCBI) | compare |
| b1861 | ruvA | -2.3 | -2.7 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3977 | tyrU | -2.3 | -1.7 | tRNA-Tyr (NCBI) | compare |
| b0737 | tolQ | -2.3 | -5.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3405 | ompR | -2.2 | -6.5 | osmolarity response regulator (NCBI) | compare |
| b0739 | tolA | -2.2 | -5.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3863 | polA | -2.1 | -2.0 | DNA polymerase I (NCBI) | compare |
| b0890 | ftsK | -2.1 | -6.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2814 | metZ | -2.1 | -2.7 | tRNA-Met (NCBI) | compare |
| b4042 | dgkA | -2.1 | -2.8 | diacylglycerol kinase (NCBI) | compare |
| b2168 | fruK | -2.0 | -2.0 | 1-phosphofructokinase (NCBI) | compare |
| b2699 | recA | -2.0 | -1.9 | recombinase A (NCBI) | compare |
| b4239 | treC | -2.0 | -2.7 | trehalose-6-P hydrolase (NCBI) | compare |
| b1860 | ruvB | -2.0 | -1.8 | Holliday junction DNA helicase B (NCBI) | compare |
| b3792 | wzxE | -1.9 | -8.9 | O-antigen translocase (NCBI) | compare |
| b3341 | rpsG | -1.9 | -2.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b4179 | vacB | -1.9 | -7.6 | putative enzyme (VIMSS) | compare |
| b3838 | tatB | -1.8 | -5.3 | sec-independent translocase (NCBI) | compare |
| b2934 | cmtB | -1.8 | -1.2 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1863 | ruvC | -1.8 | -3.2 | Holliday junction resolvase (NCBI) | compare |
| b0630 | lipB | -1.8 | -2.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0082 | mraW | -1.8 | -4.7 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0406 | tgt | -1.6 | -6.9 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b2894 | xerD | -1.6 | -1.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3613 | yibP | -1.6 | -4.9 | putative membrane protein (VIMSS) | compare |
| b3624 | rfaZ | -1.6 | -1.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0145 | dksA | -1.6 | -4.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4146 | yjeK | -1.6 | -4.0 | predicted lysine aminomutase (NCBI) | compare |
| b0053 | surA | -1.6 | -6.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2029 | gnd | -1.6 | -8.5 | 6-phosphogluconate dehydrogenase (NCBI) | compare |
| b3636 | rpmG | -1.6 | -2.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b2569 | lepA | -1.5 | -5.1 | GTP-binding protein LepA (NCBI) | compare |
| b3500 | gor | -1.5 | -1.8 | glutathione reductase (NCBI) | compare |
| b2820 | recB | -1.5 | -1.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3811 | xerC | -1.5 | -2.3 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2708 | gutQ | -1.4 | -4.7 | orf, hypothetical protein (VIMSS) | compare |
| b3082 | ygjM | -1.4 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2297 | pta | -1.4 | -1.0 | phosphate acetyltransferase (NCBI) | compare |
| b2947 | gshB | -1.4 | -4.9 | glutathione synthetase (NCBI) | compare |
| b2688 | gshA | -1.3 | -6.4 | glutamate--cysteine ligase (NCBI) | compare |
| b0386 | proC | -1.3 | -4.6 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1278 | pgpB | -1.3 | -2.4 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b3229 | sspA | -1.3 | -3.5 | stringent starvation protein A (NCBI) | compare |
| b0167 | glnD | -1.3 | -5.6 | PII uridylyl-transferase (NCBI) | compare |
| b3190 | yrbA | -1.3 | -6.0 | orf, hypothetical protein (VIMSS) | compare |
| b3414 | gntY | -1.3 | -5.1 | predicted gluconate transport associated protein (NCBI) | compare |
| b3871 | bipA | -1.3 | -8.7 | GTP-binding protein (NCBI) | compare |
| b0114 | aceE | -1.3 | -1.2 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0439 | lon | -1.2 | -5.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3784 | rfe | -1.2 | -8.8 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1709 | btuD | -1.2 | -1.4 | vitamin B12-transporter ATPase (NCBI) | compare |
| b3806 | cyaA | -1.2 | -5.5 | adenylate cyclase (NCBI) | compare |
| b0232 | yafN | -1.2 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1865 | nudB | -1.2 | -2.0 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2037 | rfbX | -1.2 | -7.0 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b2567 | rnc | -1.2 | -1.5 | ribonuclease III (NCBI) | compare |
| b3706 | trmE | -1.2 | -4.1 | tRNA modification GTPase (NCBI) | compare |
| b4472 | yhdP | -1.1 | -9.8 | conserved membrane protein, predicted transporter (NCBI) | compare |
| b2501 | ppk | -1.1 | -6.1 | polyphosphate kinase (NCBI) | compare |
| b3426 | glpD | -1.1 | -3.9 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1175 | minD | -1.1 | -3.8 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0462 | acrB | -1.1 | -9.2 | multidrug efflux system protein (NCBI) | compare |
| b2935 | tktA | -1.1 | -2.6 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2284 | nuoF | -1.1 | -4.5 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b3741 | gidA | -1.1 | -4.7 | glucose-inhibited division protein A (NCBI) | compare |
| b4503 | yafF | -1.1 | -1.1 | no description | compare |
| b1607 | ydgC | -1.1 | -1.8 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4414 | tff | -1.0 | -1.9 | unknown RNA (NCBI) | compare |
| b3387 | dam | -1.0 | -8.0 | DNA adenine methylase (NCBI) | compare |
| b2576 | srmB | -1.0 | -3.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b3629 | rfaS | -1.0 | -3.5 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2350 | yfdG | -1.0 | -4.1 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b4155 | yjeA | -1.0 | -0.7 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b2652 | ileY | -1.0 | -1.1 | tRNA-Ile (NCBI) | compare |
| b0033 | carB | -1.0 | -6.9 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b1257 | yciE | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b1648 | b1648 | -0.9 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b4647 | mokA | -0.9 | -0.8 | no description | compare |
| b3778 | rep | -0.9 | -5.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2288 | nuoA | -0.9 | -1.9 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2822 | recC | -0.9 | -3.9 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1293 | sapB | -0.9 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1627 | rsxA | -0.9 | -3.0 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b2040 | rfbD | -0.9 | -6.4 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | compare |
| b4045 | yjbJ | -0.9 | -1.5 | predicted stress response protein (NCBI) | compare |
| b0463 | acrA | -0.9 | -4.4 | multidrug efflux system (NCBI) | compare |
| b0303 | ykgI | -0.9 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b3728 | pstS | -0.9 | -3.1 | phosphate transporter subunit (NCBI) | compare |
| b2278 | nuoL | -0.8 | -5.2 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1192 | ldcA | -0.8 | -3.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b4557 | yidD | -0.8 | -3.2 | hypothetical protein (NCBI) | compare |
| b1334 | fnr | -0.8 | -2.7 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2363 | yfdT | -0.8 | -2.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0683 | fur | -0.8 | -1.1 | ferric uptake regulator (NCBI) | compare |
| b4538 | yoeF | -0.8 | -1.9 | hypothetical protein (RefSeq) | compare |
| b1842 | holE | -0.8 | -2.3 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0032 | carA | -0.8 | -3.6 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b4201 | priB | -0.8 | -2.9 | primosomal replication protein N (NCBI) | compare |
| b3257 | yhdT | -0.8 | -2.9 | conserved inner membrane protein (NCBI) | compare |
| b0405 | queA | -0.8 | -3.7 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b2506 | yfgI | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b1536 | ydeI | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b2944 | sprT | -0.8 | -3.3 | hypothetical protein (NCBI) | compare |
| b4702 | mgtL | -0.8 | -1.2 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1269 | rluB | -0.8 | -2.0 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b4653 | yicT | -0.8 | -1.6 | no description | compare |
| b0677 | nagA | -0.8 | -4.0 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1049 | mdoH | -0.8 | -5.2 | glucosyltransferase MdoH (NCBI) | compare |
| b2684 | mprA | -0.7 | -2.7 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b0730 | mngR | -0.7 | -1.2 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1084 | rne | -0.7 | -3.1 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1907 | tyrP | -0.7 | -3.7 | tyrosine transporter (NCBI) | compare |
| b0149 | mrcB | -0.7 | -5.7 | penicillin-binding protein 1b (NCBI) | compare |
| b2277 | nuoM | -0.7 | -3.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0142 | folK | -0.7 | -0.5 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1105 | ycfM | -0.7 | -3.0 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1850 | eda | -0.7 | -2.5 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3916 | pfkA | -0.7 | -2.0 | 6-phosphofructokinase (NCBI) | compare |
| b4413 | sokC | -0.7 | -1.3 | regulatory antisense RNA (NCBI) | compare |
| b4325 | yjiC | -0.7 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2516 | yfgA | -0.7 | -2.9 | hypothetical protein (NCBI) | compare |
| b0726 | sucA | -0.7 | -2.8 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0767 | ybhE | -0.7 | -2.1 | 6-phosphogluconolactonase (NCBI) | compare |
| b2906 | visC | -0.7 | -4.1 | hypothetical protein (NCBI) | compare |
| b2329 | aroC | -0.7 | -3.8 | chorismate synthase (NCBI) | compare |
| b4509 | ylcG | -0.7 | -1.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0014 | dnaK | -0.7 | -1.8 | molecular chaperone DnaK (NCBI) | compare |
| b3181 | greA | -0.7 | -3.7 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3260 | dusB | -0.7 | -2.9 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b3616 | tdh | -0.7 | -3.2 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1248 | b1248 | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1476 | fdnI | -0.7 | -0.8 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0888 | trxB | -0.7 | -2.4 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2276 | nuoN | -0.7 | -2.9 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0705 | ybfL | -0.7 | -0.4 | putative receptor protein (VIMSS) | compare |
| b4202 | rpsR | -0.7 | -1.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b1040 | csgD | -0.6 | -1.3 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b4506 | ykgO | -0.6 | -3.0 | rpmJ (L36) paralog (NCBI) | compare |
| b4180 | rlmB | -0.6 | -3.7 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b1196 | ycgY | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b4695 | ykgT | -0.6 | -1.8 | no description | compare |
| b2317 | dedA | -0.6 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b3404 | envZ | -0.6 | -4.5 | osmolarity sensor protein (NCBI) | compare |
| b1048 | mdoG | -0.6 | -3.0 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b3021 | ygiT | -0.6 | -0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3727 | pstC | -0.6 | -3.1 | phosphate transporter subunit (NCBI) | compare |
| b1038 | csgF | -0.6 | -2.0 | predicted transport protein (NCBI) | compare |
| b1951 | rcsA | -0.6 | -1.1 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1551 | b1551 | -0.6 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b0503 | ybbB | -0.6 | -2.6 | tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) | compare |
| b3836 | b3836 | -0.6 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b4481 | rffT | -0.6 | -3.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1671 | ydhX | -0.6 | -1.9 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2285 | nuoE | -0.6 | -1.5 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2955 | yggW | -0.6 | -3.6 | coproporphyrinogen III oxidase (NCBI) | compare |
| b0798 | ybiA | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b2637 | yfjT | -0.6 | -1.9 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1804 | rnd | -0.6 | -2.9 | ribonuclease D (NCBI) | compare |
| b1165 | ymgA | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b0819 | ybiS | -0.6 | -4.2 | hypothetical protein (NCBI) | compare |
| b1231 | tyrT | -0.6 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b3095 | yqjA | -0.6 | -4.2 | conserved inner membrane protein (NCBI) | compare |
| b4384 | deoD | -0.6 | -3.8 | purine nucleoside phosphorylase (NCBI) | compare |
| b2064 | asmA | -0.6 | -3.0 | predicted assembly protein (NCBI) | compare |
| b4596 | yciZ | -0.6 | -1.2 | hypothetical protein (RefSeq) | compare |
| b4521 | ycgI | -0.6 | -2.1 | hypothetical protein (NCBI) | compare |
| b4025 | pgi | -0.5 | -3.6 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3742 | mioC | -0.5 | -2.0 | flavodoxin (NCBI) | compare |
| b3617 | kbl | -0.5 | -3.6 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b4049 | dusA | -0.5 | -3.6 | tRNA-dihydrouridine synthase A (RefSeq) | compare |
| b0585 | fes | -0.5 | -3.4 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b0945 | pyrD | -0.5 | -3.4 | dihydroorotate dehydrogenase (NCBI) | compare |
| b2286 | nuoC | -0.5 | -2.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b4535 | yniD | -0.5 | -0.6 | predicted protein (RefSeq) | compare |
| b2319 | usg | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b2156 | lysP | -0.5 | -3.5 | lysine transporter (NCBI) | compare |
| b0436 | tig | -0.5 | -3.2 | trigger factor (NCBI) | compare |
| b1553 | ydfP | -0.5 | -1.4 | Qin prophage; conserved protein (NCBI) | compare |
| b2504 | yfgG | -0.5 | -0.9 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b3622 | rfaL | -0.5 | -1.6 | O-antigen ligase (NCBI) | compare |