| | gene | name | fitness | t score | description | |
|---|
| b1332 | ynaJ | +2.1 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b3979 | thrT | +1.9 | 1.3 | tRNA-Thr (NCBI) | compare |
| b2741 | rpoS | +1.7 | 7.2 | RNA polymerase sigma factor (NCBI) | compare |
| b1429 | tehA | +1.4 | 1.5 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b2939 | yqgB | +1.3 | 1.8 | predicted protein (RefSeq) | compare |
| b3933 | ftsN | +1.2 | 6.2 | essential cell division protein (NCBI) | compare |
| b1607 | ydgC | +1.1 | 1.1 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4373 | rimI | +1.1 | 2.3 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b0746 | valZ | +1.1 | 2.8 | tRNA-Val (NCBI) | compare |
| b3199 | yrbK | +1.1 | 4.3 | hypothetical protein (NCBI) | compare |
| b3021 | ygiT | +1.0 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1205 | ychH | +1.0 | 2.6 | predicted inner membrane protein (NCBI) | compare |
| b0407 | yajC | +1.0 | 1.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b1293 | sapB | +1.0 | 1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1147 | ymfL | +1.0 | 3.5 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0247 | ykfG | +1.0 | 1.6 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1358 | ydaT | +1.0 | 1.5 | Rac prophage; predicted protein (NCBI) | compare |
| b0784 | moaD | +1.0 | 2.8 | molybdopterin synthase, small subunit (NCBI) | compare |
| b2642 | yfjW | +0.9 | 1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4595 | yciY | +0.9 | 2.7 | hypothetical protein (RefSeq) | compare |
| b2646 | ypjF | +0.9 | 2.7 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b2904 | gcvH | +0.9 | 2.9 | glycine cleavage system protein H (NCBI) | compare |
| b1830 | prc | +0.9 | 4.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b4676 | yoaK | +0.9 | 0.5 | expressed protein (RefSeq) | compare |
| b1278 | pgpB | +0.9 | 0.9 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b1038 | csgF | +0.8 | 2.8 | predicted transport protein (NCBI) | compare |
| b4655 | ythA | +0.8 | 1.4 | expressed protein (RefSeq) | compare |
| b4594 | ymgJ | +0.8 | 2.9 | hypothetical protein (RefSeq) | compare |
| b1819 | manZ | +0.8 | 4.8 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b4402 | yjjY | +0.8 | 0.8 | hypothetical protein (NCBI) | compare |
| b3753 | rbsR | +0.8 | 5.7 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b3027 | ygiZ | +0.8 | 0.6 | conserved inner membrane protein (NCBI) | compare |
| b1085 | b1085 | +0.8 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1095 | fabF | +0.8 | 4.7 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b4174 | hflK | +0.8 | 4.9 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b0989 | cspH | +0.8 | 2.3 | stress protein, member of the CspA-family (NCBI) | compare |
| b1725 | yniA | +0.8 | 3.2 | predicted phosphotransferase/kinase (NCBI) | compare |
| b4370 | leuQ | +0.8 | 1.5 | tRNA-Leu (NCBI) | compare |
| b0706 | ybfD | +0.8 | 1.4 | hypothetical protein (NCBI) | compare |
| b3484 | yhhI | +0.7 | 2.5 | predicted transposase (NCBI) | compare |
| b2569 | lepA | +0.7 | 2.6 | GTP-binding protein LepA (NCBI) | compare |
| b2199 | ccmC | +0.7 | 2.8 | heme exporter subunit (NCBI) | compare |
| b1231 | tyrT | +0.7 | 0.8 | tRNA-Tyr (NCBI) | compare |
| b1550 | b1550 | +0.7 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4458 | oxyS | +0.7 | 1.1 | global regulatory RNA (NCBI) | compare |
| b3929 | rraA | +0.7 | 3.8 | ribonuclease activity regulator protein RraA (NCBI) | compare |
| b0998 | torD | +0.7 | 1.0 | chaperone protein TorD (NCBI) | compare |
| b3229 | sspA | +0.7 | 2.3 | stringent starvation protein A (NCBI) | compare |
| b3916 | pfkA | +0.7 | 1.7 | 6-phosphofructokinase (NCBI) | compare |
| b2005 | yeeV | +0.7 | 3.1 | CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b4505 | insX | +0.7 | 1.3 | predicted IS protein (RefSeq) | compare |
| b1336 | ydaH | +0.7 | 3.0 | putative pump protein (transport) (VIMSS) | compare |
| b4048 | yjbM | +0.7 | 1.7 | hypothetical protein (NCBI) | compare |
| b1593 | b1593 | +0.7 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1493 | gadB | +0.7 | 0.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1542 | ydfI | +0.7 | 1.9 | predicted mannonate dehydrogenase (NCBI) | compare |
| b1806 | yeaY | +0.7 | 3.9 | predicted lipoprotein (NCBI) | compare |
| b1013 | ycdC | +0.7 | 2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3163 | nlpI | +0.7 | 3.1 | hypothetical protein (NCBI) | compare |
| b4279 | yjhB | +0.7 | 0.5 | putative transport protein (VIMSS) | compare |
| b2726 | hypA | +0.7 | 2.7 | protein involved in nickel insertion into hydrogenases 3 (NCBI) | compare |
| b0641 | rlpB | +0.6 | 2.0 | minor lipoprotein (NCBI) | compare |
| b1572 | ydfB | +0.6 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4406 | yaeP | +0.6 | 1.1 | hypothetical protein (NCBI) | compare |
| b1581 | rspA | +0.6 | 1.5 | predicted dehydratase (NCBI) | compare |
| b1362 | rzpR | +0.6 | 1.3 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b1758 | b1758 | +0.6 | 0.8 | putative cytochrome oxidase (VIMSS) | compare |
| b1615 | uidC | +0.6 | 2.3 | membrane-associated protein (VIMSS) | compare |
| b1553 | ydfP | +0.6 | 0.9 | Qin prophage; conserved protein (NCBI) | compare |
| b3138 | agaB | +0.6 | 2.3 | N-acetylgalactosamine-specific enzyme IIB component of PTS (NCBI) | compare |
| b2195 | ccmG | +0.6 | 2.6 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b1438 | ydcQ | +0.6 | 3.3 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4513 | kdpF | +0.6 | 1.9 | potassium ion accessory transporter subunit (NCBI) | compare |
| b0966 | hspQ | +0.6 | 3.2 | DNA-binding protein, hemimethylated (RefSeq) | compare |
| b1946 | fliN | +0.6 | 2.0 | flagellar motor switch protein (NCBI) | compare |
| b0809 | glnQ | +0.6 | 2.9 | glutamine ABC transporter ATP-binding protein (NCBI) | compare |
| b1667 | ydhR | +0.6 | 0.8 | hypothetical protein (NCBI) | compare |
| b1813 | yeaB | +0.6 | 3.3 | predicted NUDIX hydrolase (NCBI) | compare |
| b0865 | ybjP | +0.6 | 2.3 | predicted lipoprotein (NCBI) | compare |
| b2426 | ucpA | +0.6 | 0.9 | putative oxidoreductase (VIMSS) | compare |
| b1685 | ydiH | +0.6 | 0.9 | predicted protein (RefSeq) | compare |
| b2419 | yfeK | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b1992 | cobS | +0.6 | 1.4 | cobalamin synthase (NCBI) | compare |
| b4408 | csrB | +0.6 | 2.4 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b3778 | rep | +0.6 | 3.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1505 | ydeT | +0.6 | 1.3 | hypothetical protein (RefSeq) | compare |
| b3029 | ygiN | +0.6 | 2.2 | quinol monooxygenase (NCBI) | compare |
| b4631 | ykgQ | +0.6 | 1.1 | no description | compare |
| b1427 | rimL | +0.6 | 1.8 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b2248 | yfaX | +0.6 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3012 | yqhE | +0.6 | 3.8 | orf, hypothetical protein (VIMSS) | compare |
| b1519 | tam | +0.5 | 2.8 | trans-aconitate 2-methyltransferase (NCBI) | compare |
| b4163 | glyV | +0.5 | 0.9 | tRNA-Gly (NCBI) | compare |
| b1882 | cheY | +0.5 | 0.3 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b4477 | dgoA | +0.5 | 1.9 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) | compare |
| b1001 | yccE | +0.5 | 0.4 | hypothetical protein (NCBI) | compare |
| b2183 | rsuA | +0.5 | 2.3 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b2317 | dedA | +0.5 | 2.5 | conserved inner membrane protein (NCBI) | compare |
| b1302 | puuE | +0.5 | 2.0 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b4653 | yicT | +0.5 | 1.3 | no description | compare |
| b1567 | intK | +0.5 | 1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b1847 | yebF | +0.5 | 1.0 | predicted protein (RefSeq) | compare |
| b0240 | crl | +0.5 | 2.4 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1862 | yebB | +0.5 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b3164 | pnp | +0.5 | 1.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4543 | ypaA | +0.5 | 2.0 | predicted protein (NCBI) | compare |
| b2272 | yfbM | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b2794 | yqcD | +0.5 | 2.7 | hypothetical protein (NCBI) | compare |
| b3999 | yjaG | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b1762 | b1762 | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0263 | afuB | +0.5 | 1.7 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b3718 | yieK | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b1683 | ynhE | +0.5 | 3.7 | orf, hypothetical protein (VIMSS) | compare |
| b2314 | dedD | +0.5 | 2.0 | putative lipoprotein (VIMSS) | compare |
| b1380 | ldhA | +0.5 | 1.6 | D-lactate dehydrogenase (NCBI) | compare |
| b3658 | selC | +0.5 | 1.7 | tRNA-Sec (NCBI) | compare |
| b1194 | ycgR | +0.5 | 1.8 | protein involved in flagellar function (NCBI) | compare |
| b0610 | rnk | +0.5 | 1.7 | nucleoside diphosphate kinase regulator (NCBI) | compare |
| b1880 | flhB | +0.5 | 2.5 | flagellar biosynthesis protein B (NCBI) | compare |
| b1650 | nemA | +0.5 | 2.5 | N-ethylmaleimide reductase, FMN-linked (NCBI) | compare |
| b4391 | yjjK | +0.5 | 3.4 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2572 | rseA | +0.5 | 1.6 | anti-sigma factor (NCBI) | compare |
| b0548 | ninE | +0.5 | 1.5 | DLP12 prophage; conserved protein (NCBI) | compare |
| b3977 | tyrU | +0.5 | 0.4 | tRNA-Tyr (NCBI) | compare |
| b0454 | ybaZ | +0.5 | 2.9 | predicted methyltransferase (NCBI) | compare |
| b0059 | hepA | +0.5 | 3.6 | ATP-dependent helicase HepA (NCBI) | compare |
| b4316 | fimC | +0.5 | 2.7 | periplasmic chaperone, required for type 1 fimbriae (VIMSS) | compare |
| b2717 | hycI | +0.5 | 3.1 | protease involved in processing C-terminal end of HycE (NCBI) | compare |
| b0461 | ybaJ | +0.5 | 2.7 | hypothetical protein (NCBI) | compare |
| b0736 | ybgC | +0.5 | 1.3 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b1822 | rrmA | +0.5 | 1.3 | 23S rRNA m1G745 methyltransferase (NCBI) | compare |
| b2058 | wcaB | +0.5 | 0.7 | predicted acyl transferase (NCBI) | compare |
| b3443 | yrhA | +0.5 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2905 | gcvT | +0.5 | 2.6 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b1757 | b1757 | +0.5 | 2.1 | putative thiosulfate sulfur transferase (VIMSS) | compare |
| b4097 | phnK | +0.5 | 1.5 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b1524 | yneH | +0.5 | 0.5 | predicted glutaminase (NCBI) | compare |
| b0212 | gloB | +0.5 | 1.0 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b3292 | zntR | +0.5 | 2.0 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b1315 | ycjS | +0.5 | 1.8 | predicted oxidoreductase, NADH-binding (NCBI) | compare |
| b1824 | yobF | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b3068 | ygjF | +0.5 | 1.9 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b1360 | ydaV | +0.5 | 1.3 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b0765 | modC | +0.5 | 1.6 | molybdate transporter subunit (NCBI) | compare |
| b2903 | gcvP | +0.5 | 3.3 | glycine dehydrogenase (NCBI) | compare |
| b0550 | rusA | +0.5 | 1.4 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b2004 | yeeU | +0.5 | 1.1 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b0711 | ybgJ | +0.4 | 2.5 | predicted enzyme subunit (NCBI) | compare |
| b3861 | yihF | +0.4 | 3.1 | putative GTP-binding protein (VIMSS) | compare |
| b4172 | hfq | +0.4 | 0.4 | RNA-binding protein Hfq (NCBI) | compare |
| b1613 | manA | +0.4 | 0.8 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b1512 | lsrR | +0.4 | 2.6 | lsr operon transcriptional repressor (NCBI) | compare |
| b3194 | yrbE | +0.4 | 2.9 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1528 | ydeA | +0.4 | 2.9 | sugar efflux transporter (NCBI) | compare |
| b0686 | ybfF | +0.4 | 2.3 | hypothetical protein (NCBI) | compare |
| b2428 | yfeU | +0.4 | 1.9 | N-acetylmuramic acid-6-phosphate etherase (NCBI) | compare |
| b4071 | nrfB | +0.4 | 1.2 | formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS) | compare |
| b4330 | yjiH | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1741 | ydjQ | +0.4 | 1.6 | endonuclease of nucleotide excision repair (NCBI) | compare |
| b3625 | rfaY | +0.4 | 1.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3866 | yihI | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b1754 | b1754 | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1334 | fnr | +0.4 | 1.0 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2267 | elaA | +0.4 | 1.7 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0713 | ybgL | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b0227 | yafL | +0.4 | 2.5 | predicted lipoprotein and C40 family peptidase (NCBI) | compare |
| b4627 | ykfL | +0.4 | 2.0 | no description | compare |
| b0469 | apt | +0.4 | 2.1 | adenine phosphoribosyltransferase (NCBI) | compare |
| b3033 | yqiB | +0.4 | 1.7 | predicted dehydrogenase (NCBI) | compare |
| b3466 | yhhL | +0.4 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b0682 | ybfN | +0.4 | 2.2 | predicted lipoprotein (NCBI) | compare |
| b2771 | ygcS | +0.4 | 2.1 | putative transport protein (VIMSS) | compare |
| b2061 | wzb | +0.4 | 1.0 | protein-tyrosine phosphatase (NCBI) | compare |
| b3034 | nudF | +0.4 | 1.5 | ADP-ribose pyrophosphatase (NCBI) | compare |
| b4497 | yeeL | +0.4 | 1.2 | no description | compare |
| b1199 | dhaL | +0.4 | 2.6 | dihydroxyacetone kinase, C-terminal domain (NCBI) | compare |
| b4369 | leuP | +0.4 | 1.2 | tRNA-Leu (NCBI) | compare |
| b1123 | potD | +0.4 | 1.9 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b1388 | paaA | +0.4 | 2.2 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b0895 | dmsB | +0.4 | 2.0 | dimethyl sulfoxide reductase, anaerobic, subunit B (NCBI) | compare |
| b4413 | sokC | +0.4 | 0.8 | regulatory antisense RNA (NCBI) | compare |
| b1844 | exoX | +0.4 | 1.3 | exodeoxyribonuclease X (NCBI) | compare |
| b1538 | dcp | +0.4 | 2.3 | dipeptidyl carboxypeptidase II (NCBI) | compare |
| b2128 | yehW | +0.4 | 1.9 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0858 | ybjO | +0.4 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b1125 | potB | +0.4 | 1.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0191 | yaeJ | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b0850 | ybjC | +0.4 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b1829 | htpX | +0.4 | 1.9 | heat shock protein HtpX (NCBI) | compare |
| b2263 | yfbB | +0.4 | 1.3 | predicted peptidase (NCBI) | compare |
| b2829 | ptsP | +0.4 | 3.1 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b1321 | ycjX | +0.4 | 1.6 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b0977 | hyaF | +0.4 | 2.3 | protein involved in nickel incorporation into hydrogenase-1 proteins (NCBI) | compare |
| b1939 | fliG | +0.4 | 2.3 | flagellar motor switch protein G (NCBI) | compare |
| b1738 | chbB | +0.4 | 2.5 | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS (NCBI) | compare |
| b4394 | yjjX | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3150 | yraP | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b1289 | ycjD | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b2252 | ais | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b1534 | ydeE | +0.4 | 1.5 | predicted transporter (NCBI) | compare |