| | gene | name | fitness | t score | description | |
|---|
| PFR28_02289 | | +3.3 | 10.6 | HTH-type transcriptional repressor NicS | compare |
| PFR28_01836 | | +2.9 | 10.8 | Transcriptional regulator SlyA | compare |
| PFR28_03243 | | +2.5 | 13.2 | Virulence sensor histidine kinase PhoQ | compare |
| PFR28_03244 | | +2.4 | 13.9 | Transcriptional regulatory protein PhoP | compare |
| PFR28_05077 | | +2.4 | 12.6 | D-inositol-3-phosphate glycosyltransferase | compare |
| PFR28_05075 | | +2.3 | 15.3 | hypothetical protein | compare |
| PFR28_00176 | | +2.2 | 2.3 | Lipopolysaccharide export system protein LptC | compare |
| PFR28_01370 | | +2.0 | 18.4 | hypothetical protein | compare |
| PFR28_01380 | | +1.8 | 10.0 | hypothetical protein | compare |
| PFR28_00844 | | +1.7 | 3.1 | hypothetical protein | compare |
| PFR28_01102 | | +1.7 | 12.2 | Multidrug resistance protein NorM | compare |
| PFR28_00836 | | +1.6 | 9.2 | Flagellar FliJ protein | compare |
| PFR28_01330 | | +1.6 | 2.1 | Glucose starvation-inducible protein B | compare |
| PFR28_01251 | | +1.6 | 2.3 | ECF RNA polymerase sigma factor EcfG | compare |
| PFR28_00138 | | +1.5 | 12.8 | Vitamin B12 transport ATP-binding protein BacA | compare |
| PFR28_01268 | | +1.4 | 7.4 | Arginine N-succinyltransferase subunit alpha | compare |
| PFR28_00828 | | +1.4 | 11.7 | Anaerobic nitric oxide reductase transcription regulator NorR | compare |
| PFR28_01271 | | +1.4 | 5.5 | Glutamine synthetase | compare |
| PFR28_00930 | | +1.4 | 4.6 | GDP-perosamine synthase | compare |
| PFR28_01391 | | +1.4 | 3.3 | Peptidyl-prolyl cis-trans isomerase C | compare |
| PFR28_04978 | | +1.4 | 7.8 | Glucans biosynthesis protein G | compare |
| PFR28_03073 | | +1.4 | 7.2 | Putative esterase | compare |
| PFR28_02872 | | +1.4 | 1.4 | hypothetical protein | compare |
| PFR28_00835 | | +1.4 | 11.9 | Flagellum-specific ATP synthase | compare |
| PFR28_00846 | | +1.4 | 8.5 | Flagellar biosynthetic protein FliQ | compare |
| PFR28_04979 | | +1.3 | 9.5 | Glucans biosynthesis glucosyltransferase H | compare |
| PFR28_00833 | | +1.3 | 7.9 | Flagellar motor switch protein FliG | compare |
| PFR28_04712 | | +1.3 | 1.2 | Dodecin | compare |
| PFR28_03240 | | +1.3 | 1.9 | IS110 family transposase ISPfl1 | compare |
| PFR28_00332 | | +1.3 | 8.7 | Thiol:disulfide interchange protein DsbC | compare |
| PFR28_00831 | | +1.2 | 8.1 | Flagellar hook-basal body complex protein FliE | compare |
| PFR28_00849 | | +1.2 | 10.6 | Flagellar biosynthesis protein FlhA | compare |
| PFR28_01435 | | +1.2 | 2.0 | Response regulator UvrY | compare |
| PFR28_01272 | | +1.2 | 5.7 | Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | compare |
| PFR28_00834 | | +1.2 | 9.4 | hypothetical protein | compare |
| PFR28_02403 | | +1.2 | 2.2 | Na(+)/H(+) antiporter subunit C1 | compare |
| PFR28_02461 | | +1.1 | 4.3 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | compare |
| PFR28_00847 | | +1.1 | 7.0 | Flagellar biosynthetic protein FliR | compare |
| PFR28_01269 | | +1.1 | 4.3 | Putrescine importer PuuP | compare |
| PFR28_03254 | | +1.1 | 6.8 | Flagellar basal body rod protein FlgB | compare |
| PFR28_00832 | | +1.1 | 8.5 | Flagellar M-ring protein | compare |
| PFR28_01907 | | +1.0 | 2.1 | hypothetical protein | compare |
| PFR28_00842 | | +1.0 | 7.7 | Flagellar motor switch protein FliM | compare |
| PFR28_00840 | | +1.0 | 7.6 | hypothetical protein | compare |
| PFR28_00848 | | +1.0 | 6.4 | Flagellar biosynthetic protein FlhB | compare |
| PFR28_00495 | | +1.0 | 8.0 | hypothetical protein | compare |
| PFR28_00845 | | +1.0 | 5.4 | Flagellar biosynthetic protein FliP | compare |
| PFR28_03257 | | +1.0 | 4.7 | hypothetical protein | compare |
| PFR28_03900 | | +1.0 | 1.9 | hypothetical protein | compare |
| PFR28_01267 | | +1.0 | 3.8 | Arginine N-succinyltransferase subunit beta | compare |
| PFR28_00927 | | +1.0 | 6.3 | D-inositol-3-phosphate glycosyltransferase | compare |
| PFR28_04473 | | +1.0 | 1.2 | DNA-binding protein HU-beta | compare |
| PFR28_00850 | | +1.0 | 6.6 | Signal recognition particle 54 kDa protein | compare |
| PFR28_00917 | | +1.0 | 6.4 | UDP-N-acetyl-D-mannosamine dehydrogenase | compare |
| PFR28_00452 | | +1.0 | 1.8 | hypothetical protein | compare |
| PFR28_00148 | | +1.0 | 2.5 | hypothetical protein | compare |
| PFR28_00692 | | +0.9 | 6.4 | Sigma factor AlgU regulatory protein MucB | compare |
| PFR28_00299 | | +0.9 | 0.7 | hypothetical protein | compare |
| PFR28_03079 | | +0.9 | 6.6 | Sensor histidine kinase RcsC | compare |
| PFR28_00916 | | +0.9 | 6.6 | UDP-N-acetylglucosamine 2-epimerase | compare |
| PFR28_02210 | | +0.9 | 1.3 | cAMP-activated global transcriptional regulator CRP | compare |
| PFR28_01181 | | +0.9 | 3.3 | hypothetical protein | compare |
| PFR28_02048 | | +0.9 | 2.1 | hypothetical protein | compare |
| PFR28_03191 | | +0.9 | 1.3 | hypothetical protein | compare |
| PFR28_01212 | | +0.9 | 2.4 | hypothetical protein | compare |
| PFR28_00804 | | +0.9 | 5.9 | Flagellar basal-body rod protein FlgF | compare |
| PFR28_04927 | | +0.9 | 2.0 | PanD regulatory factor | compare |
| PFR28_00809 | | +0.8 | 7.0 | hypothetical protein | compare |
| PFR28_03578 | | +0.8 | 1.9 | Transcriptional activator protein CzcR | compare |
| PFR28_05074 | | +0.8 | 5.6 | hypothetical protein | compare |
| PFR28_00808 | | +0.8 | 5.8 | hypothetical protein | compare |
| PFR28_05079 | | +0.8 | 3.7 | hypothetical protein | compare |
| PFR28_00807 | | +0.8 | 3.1 | Flagellar P-ring protein | compare |
| PFR28_00806 | | +0.8 | 5.6 | Flagellar L-ring protein | compare |
| PFR28_03736 | | +0.8 | 1.9 | hypothetical protein | compare |
| PFR28_04322 | | +0.8 | 3.9 | hypothetical protein | compare |
| PFR28_00852 | | +0.8 | 6.3 | RNA polymerase sigma factor FliA | compare |
| PFR28_02293 | | +0.8 | 3.2 | Sigma54-dependent transcriptional activator SfnR | compare |
| PFR28_04209 | | +0.8 | 4.8 | Ribosomal RNA small subunit methyltransferase E | compare |
| PFR28_03161 | | +0.8 | 0.8 | tRNA-Arg | compare |
| PFR28_04031 | | +0.8 | 5.7 | Anhydro-N-acetylmuramic acid kinase | compare |
| PFR28_00820 | | +0.8 | 2.9 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 | compare |
| PFR28_00925 | | +0.8 | 1.6 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | compare |
| PFR28_00764 | | +0.8 | 1.7 | hypothetical protein | compare |
| PFR28_02374 | | +0.8 | 4.2 | Universal stress protein E | compare |
| PFR28_03259 | | +0.7 | 2.1 | hypothetical protein | compare |
| PFR28_04130 | | +0.7 | 3.4 | Formyltetrahydrofolate deformylase | compare |
| PFR28_04182 | | +0.7 | 3.1 | hypothetical protein | compare |
| PFR28_01582 | | +0.7 | 3.1 | Alpha-ketoglutaric semialdehyde dehydrogenase | compare |
| PFR28_01332 | | +0.7 | 3.5 | Zinc transporter ZupT | compare |
| PFR28_03253 | | +0.7 | 5.3 | Flagellar basal-body rod protein FlgC | compare |
| PFR28_00838 | | +0.7 | 4.8 | Sensor histidine kinase RcsC | compare |
| PFR28_03251 | | +0.7 | 6.4 | Flagellar hook protein FlgE | compare |
| PFR28_01014 | | +0.7 | 0.9 | Pyrimidine/purine nucleoside phosphorylase | compare |
| PFR28_02562 | | +0.7 | 2.2 | hypothetical protein | compare |
| PFR28_02718 | | +0.7 | 3.1 | hypothetical protein | compare |
| PFR28_05111 | | +0.7 | 3.5 | Motility protein B | compare |
| PFR28_03202 | | +0.7 | 1.0 | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | compare |
| PFR28_01182 | | +0.7 | 0.7 | hypothetical protein | compare |
| PFR28_00826 | | +0.7 | 3.8 | Flagellar secretion chaperone FliS | compare |
| PFR28_03627 | | +0.7 | 1.6 | SOS response-associated protein YedK | compare |
| PFR28_03305 | | +0.7 | 2.2 | Zinc transport protein ZntB | compare |
| PFR28_03650 | | +0.7 | 2.0 | hypothetical protein | compare |
| PFR28_02738 | | +0.7 | 2.5 | hypothetical protein | compare |
| PFR28_00862 | | +0.7 | 2.5 | hypothetical protein | compare |
| PFR28_01749 | | +0.7 | 1.6 | hypothetical protein | compare |
| PFR28_01962 | | +0.7 | 1.8 | Protein hit | compare |
| PFR28_03350 | | +0.7 | 2.2 | hypothetical protein | compare |
| PFR28_04060 | | +0.7 | 4.9 | N-acetylmuramate/N-acetylglucosamine kinase | compare |
| PFR28_00805 | | +0.7 | 4.0 | Flagellar basal-body rod protein FlgG | compare |
| PFR28_01644 | | +0.7 | 0.8 | hypothetical protein | compare |
| PFR28_00823 | | +0.7 | 4.4 | Flagellin | compare |
| PFR28_04327 | | +0.7 | 2.2 | hypothetical protein | compare |
| PFR28_01760 | | +0.7 | 2.2 | hypothetical protein | compare |
| PFR28_05232 | | +0.7 | 1.0 | hypothetical protein | compare |
| PFR28_04485 | | +0.7 | 1.3 | Phosphate-specific transport system accessory protein PhoU | compare |
| PFR28_03362 | | +0.7 | 1.6 | hypothetical protein | compare |
| PFR28_01119 | | +0.7 | 1.7 | Beta-hexosaminidase | compare |
| PFR28_00585 | | +0.6 | 4.5 | Long-chain-fatty-acid--CoA ligase | compare |
| PFR28_03246 | | +0.6 | 2.6 | hypothetical protein | compare |
| PFR28_00890 | | +0.6 | 2.5 | hypothetical protein | compare |
| PFR28_04920 | | +0.6 | 4.3 | Putative nuclease YhcG | compare |
| PFR28_03179 | | +0.6 | 0.9 | tRNA-Val | compare |
| PFR28_03387 | | +0.6 | 0.9 | hypothetical protein | compare |
| PFR28_00932 | | +0.6 | 5.3 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | compare |
| PFR28_02451 | | +0.6 | 1.9 | Biotin biosynthesis cytochrome P450 | compare |
| PFR28_00054 | | +0.6 | 0.7 | hypothetical protein | compare |
| PFR28_00228 | | +0.6 | 1.4 | hypothetical protein | compare |
| PFR28_00246 | | +0.6 | 3.9 | Protoheme IX farnesyltransferase | compare |
| PFR28_00657 | | +0.6 | 1.9 | Glutathione transferase FosA | compare |
| PFR28_01573 | | +0.6 | 2.0 | hypothetical protein | compare |
| PFR28_00131 | | +0.6 | 3.9 | Periplasmic dipeptide transport protein | compare |
| PFR28_05211 | | +0.6 | 3.1 | hypothetical protein | compare |
| PFR28_01153 | | +0.6 | 0.9 | hypothetical protein | compare |
| PFR28_03232 | | +0.6 | 1.6 | putative protein YfgD | compare |
| PFR28_04298 | | +0.6 | 3.6 | Gamma-glutamylputrescine synthetase PuuA | compare |
| PFR28_01279 | | +0.6 | 3.6 | hypothetical protein | compare |
| PFR28_04131 | | +0.6 | 2.0 | Sarcosine oxidase subunit gamma | compare |
| PFR28_01023 | | +0.6 | 1.8 | hypothetical protein | compare |
| PFR28_02587 | | +0.6 | 2.1 | hypothetical protein | compare |
| PFR28_04323 | | +0.6 | 3.6 | hypothetical protein | compare |
| PFR28_02576 | | +0.6 | 1.9 | Putative aminoacrylate peracid reductase RutC | compare |
| PFR28_01427 | | +0.6 | 1.1 | hypothetical protein | compare |
| PFR28_04286 | | +0.6 | 3.4 | hypothetical protein | compare |
| PFR28_00613 | | +0.6 | 0.4 | hypothetical protein | compare |
| PFR28_01058 | | +0.6 | 2.0 | hypothetical protein | compare |
| PFR28_01123 | | +0.6 | 4.3 | Transcription-repair-coupling factor | compare |
| PFR28_02342 | | +0.6 | 2.3 | hypothetical protein | compare |
| PFR28_01387 | | +0.6 | 1.0 | 2-iminobutanoate/2-iminopropanoate deaminase | compare |
| PFR28_03919 | | +0.6 | 0.8 | hypothetical protein | compare |
| PFR28_03905 | | +0.6 | 2.3 | hypothetical protein | compare |
| PFR28_02559 | | +0.6 | 1.0 | hypothetical protein | compare |
| PFR28_04813 | | +0.5 | 1.0 | hypothetical protein | compare |
| PFR28_00909 | | +0.5 | 1.5 | 3-phosphoshikimate 1-carboxyvinyltransferase | compare |
| PFR28_02234 | | +0.5 | 1.6 | hypothetical protein | compare |
| PFR28_05014 | | +0.5 | 3.9 | Cell division protein DamX | compare |
| PFR28_04460 | | +0.5 | 1.4 | hypothetical protein | compare |
| PFR28_02027 | | +0.5 | 3.1 | HTH-type transcriptional regulator DmlR | compare |
| PFR28_04144 | | +0.5 | 1.9 | hypothetical protein | compare |
| PFR28_02818 | | +0.5 | 4.4 | hypothetical protein | compare |
| PFR28_01356 | | +0.5 | 3.4 | Sensor histidine kinase RcsC | compare |
| PFR28_01485 | | +0.5 | 1.5 | hypothetical protein | compare |
| PFR28_01903 | | +0.5 | 1.9 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | compare |
| PFR28_02684 | | +0.5 | 1.8 | hypothetical protein | compare |
| PFR28_02527 | | +0.5 | 1.1 | hypothetical protein | compare |
| PFR28_03261 | | +0.5 | 3.8 | putative MFS-type transporter YcaD | compare |
| PFR28_01386 | | +0.5 | 1.1 | Glutamine transport ATP-binding protein GlnQ | compare |
| PFR28_05172 | | +0.5 | 2.0 | Phosphate starvation-inducible protein PsiF | compare |
| PFR28_05180 | | +0.5 | 1.4 | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | compare |
| PFR28_00049 | | +0.5 | 2.1 | Oligopeptide transport ATP-binding protein OppD | compare |
| PFR28_03252 | | +0.5 | 2.7 | Basal-body rod modification protein FlgD | compare |
| PFR28_01598 | | +0.5 | 1.4 | 2-dehydro-3-deoxygluconokinase | compare |
| PFR28_01326 | | +0.5 | 1.0 | HTH-type transcriptional regulator GltC | compare |
| PFR28_01219 | | +0.5 | 1.3 | hypothetical protein | compare |
| PFR28_03053 | | +0.5 | 1.7 | hypothetical protein | compare |
| PFR28_02213 | | +0.5 | 1.8 | hypothetical protein | compare |
| PFR28_02330 | | +0.5 | 2.3 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | compare |
| PFR28_00602 | | +0.5 | 0.8 | hypothetical protein | compare |
| PFR28_00268 | | +0.5 | 1.9 | hypothetical protein | compare |
| PFR28_00791 | | +0.5 | 3.7 | Outer membrane protein assembly factor BamA | compare |
| PFR28_05198 | | +0.5 | 1.7 | hypothetical protein | compare |
| PFR28_01025 | | +0.5 | 1.8 | hypothetical protein | compare |
| PFR28_01162 | | +0.5 | 1.6 | hypothetical protein | compare |
| PFR28_03078 | | +0.5 | 2.6 | hypothetical protein | compare |
| PFR28_03322 | | +0.5 | 1.6 | hypothetical protein | compare |
| PFR28_04301 | | +0.5 | 2.0 | Aliphatic sulfonates import ATP-binding protein SsuB | compare |
| PFR28_03706 | | +0.5 | 2.3 | hypothetical protein | compare |
| PFR28_00726 | | +0.5 | 2.4 | hypothetical protein | compare |
| PFR28_03853 | | +0.5 | 1.0 | hypothetical protein | compare |
| PFR28_03891 | | +0.5 | 3.1 | Protein DedA | compare |
| PFR28_01034 | | +0.5 | 2.1 | Protein MbtH | compare |
| PFR28_00483 | | +0.5 | 1.6 | hypothetical protein | compare |
| PFR28_04787 | | +0.5 | 3.6 | Leukotoxin export ATP-binding protein LtxB | compare |
| PFR28_02464 | | +0.5 | 2.3 | hypothetical protein | compare |
| PFR28_01566 | | +0.5 | 1.4 | Arsenic resistance transcriptional regulator ArsR1 | compare |
| PFR28_05193 | | +0.5 | 1.3 | hypothetical protein | compare |
| PFR28_03615 | | +0.5 | 1.9 | hypothetical protein | compare |
| PFR28_04400 | | +0.5 | 2.9 | Leucine-responsive regulatory protein | compare |
| PFR28_01324 | | +0.5 | 2.4 | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | compare |
| PFR28_02788 | | +0.5 | 0.6 | hypothetical protein | compare |