Experiment set6S9 for Escherichia coli ECOR27

Compare to:

CPL00168

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -5.7 -15.1 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -5.4 -5.3 O-antigen ligase RfaL compare
NOLOHH_15730 -5.3 -7.2 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07555 rfaJ -5.1 -3.5 glucosyltransferase compare
NOLOHH_06665 wzyE -5.1 -7.0 ECA oligosaccharide polymerase compare
NOLOHH_07560 rfaB -4.9 -6.7 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_06675 wzxE -4.8 -3.3 lipid III flippase WzxE compare
NOLOHH_07545 waaO -4.6 -3.1 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_04525 miaA -4.0 -2.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_18730 marC -4.0 -2.7 NAAT family transporter MarC compare
NOLOHH_08605 yrhA -3.8 -1.6 protein YrhA compare
NOLOHH_23480 pgm -3.8 -2.6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_20555 chaB -3.6 -2.8 putative cation transport regulator ChaB compare
NOLOHH_07575 rfaF -3.6 -2.4 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_23145 galE -3.6 -4.2 UDP-glucose 4-epimerase GalE compare
NOLOHH_21130 yceD -3.3 -3.1 23S rRNA accumulation protein YceD compare
NOLOHH_20460 galU -3.1 -2.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_07535 rfaG -3.0 -5.4 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_05815 metL -3.0 -12.9 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_11495 xerD -2.9 -3.1 site-specific tyrosine recombinase XerD compare
NOLOHH_05490 hupA -2.9 -2.7 DNA-binding protein HU-alpha compare
NOLOHH_13990 ypeD -2.7 -2.0 Protein YpeD compare
NOLOHH_19485 paaB -2.7 -2.0 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_13115 shoB -2.6 -1.5 Small toxic protein ShoB compare
NOLOHH_23510 fur -2.5 -2.4 ferric iron uptake transcriptional regulator compare
NOLOHH_17440 astE -2.5 -2.3 succinylglutamate desuccinylase compare
NOLOHH_00565 -2.5 -2.1 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_08515 ftsX -2.5 -3.7 permease-like cell division protein FtsX compare
NOLOHH_06395 rfaH -2.4 -6.5 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_20550 chaC -2.3 -1.9 glutathione-specific gamma-glutamylcyclotransferase compare
NOLOHH_15615 dcd -2.2 -4.5 dCTP deaminase compare
NOLOHH_19095 narW -2.2 -2.3 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_16855 kdgA -2.2 -2.0 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_06550 xerC -2.1 -2.8 tyrosine recombinase XerC compare
NOLOHH_19340 trg -2.1 -2.6 methyl-accepting chemotaxis protein Trg compare
NOLOHH_17545 yniA -2.1 -2.0 putative ketoamine kinase YniA compare
NOLOHH_24675 finO -2.1 -8.3 Fertility inhibition protein compare
NOLOHH_24335 -2.0 -3.3 YdeA protein compare
NOLOHH_00445 -2.0 -3.3 peptidyl-arginine deiminase compare
NOLOHH_08900 aroK -2.0 -1.6 shikimate kinase AroK compare
NOLOHH_24235 -2.0 -1.1 conjugal transfer protein TraM compare
NOLOHH_14475 nuoE -2.0 -1.7 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_20295 rluB -2.0 -2.7 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_05225 dgkA -1.9 -3.8 diacylglycerol kinase compare
NOLOHH_14455 -1.9 -1.6 hypothetical protein compare
NOLOHH_20940 potB -1.9 -2.2 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_14340 ubiX -1.9 -2.4 flavin prenyltransferase UbiX compare
NOLOHH_20450 tdk -1.9 -3.7 thymidine kinase compare
NOLOHH_17785 sufD -1.9 -2.0 Fe-S cluster assembly protein SufD compare
NOLOHH_17055 -1.9 -2.0 Cytoplasmic protein compare
NOLOHH_18305 ynfA -1.9 -1.3 YnfA family protein compare
NOLOHH_21450 pgaB -1.8 -2.0 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
NOLOHH_05965 pfkA -1.8 -4.9 6-phosphofructokinase compare
NOLOHH_13055 rseA -1.8 -2.3 anti-sigma-E factor RseA compare
NOLOHH_06530 corA -1.8 -4.0 magnesium/cobalt transporter CorA compare
NOLOHH_00605 essD -1.8 -3.1 phage lysis protein EssD compare
NOLOHH_17115 fadD -1.8 -1.4 long-chain-fatty-acid--CoA ligase FadD compare
NOLOHH_21095 fabF -1.8 -1.7 beta-ketoacyl-ACP synthase II compare
NOLOHH_10220 yhaL -1.8 -1.7 Uncharacterized protein YhaL compare
NOLOHH_04150 mgtL -1.8 -1.4 mgtA leader peptide compare
NOLOHH_17270 yeaC -1.7 -1.8 Uncharacterized protein YeaC compare
NOLOHH_13865 crr -1.7 -1.2 PTS glucose transporter subunit IIA compare
NOLOHH_02185 ydcD -1.7 -1.2 Uncharacterized protein YdcD compare
NOLOHH_08375 pitA -1.6 -5.0 inorganic phosphate transporter PitA compare
NOLOHH_20250 ymiC -1.6 -1.3 Protein YmiC compare
NOLOHH_12545 recA -1.6 -2.6 recombinase RecA compare
NOLOHH_19040 adhP -1.6 -2.1 alcohol dehydrogenase AdhP compare
NOLOHH_09730 ptsN -1.6 -2.5 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_00615 quuD -1.6 -1.1 antitermination protein QuuD compare
NOLOHH_08085 -1.6 -2.7 hypothetical protein compare
NOLOHH_13185 glyA -1.6 -2.7 serine hydroxymethyltransferase compare
NOLOHH_13480 arsC -1.6 -1.7 arsenate reductase (glutaredoxin) compare
NOLOHH_22835 -1.6 -2.7 hypothetical protein compare
NOLOHH_22050 serC -1.5 -6.2 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_06310 yihD -1.5 -2.0 Protein YihD compare
NOLOHH_17670 fadK -1.5 -1.4 medium-chain fatty-acid--CoA ligase compare
NOLOHH_05230 plsB -1.5 -1.7 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_22920 -1.5 -3.0 protein ninF compare
NOLOHH_15485 yegS -1.5 -2.7 lipid kinase YegS compare
NOLOHH_19785 -1.5 -1.9 DUF977 domain-containing protein compare
NOLOHH_17365 nudG -1.5 -1.3 CTP pyrophosphohydrolase compare
NOLOHH_23485 seqA -1.4 -1.5 replication initiation negative regulator SeqA compare
NOLOHH_20465 rssB -1.4 -1.6 two-component system response regulator RssB compare
NOLOHH_06920 mnmG -1.4 -3.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_16895 exoX -1.4 -1.7 exodeoxyribonuclease X compare
NOLOHH_02845 aceE -1.4 -1.8 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_22605 ybiJ -1.4 -1.2 DUF1471 domain-containing protein compare
NOLOHH_06300 dsbA -1.4 -2.8 thiol:disulfide interchange protein DsbA compare
NOLOHH_22880 -1.4 -5.7 phage holin, lambda family compare
NOLOHH_00360 -1.4 -7.9 relaxase/mobilization nuclease compare
NOLOHH_20355 ompW -1.4 -2.4 outer membrane protein OmpW compare
NOLOHH_20070 ycjM -1.4 -1.7 glucosylglycerate phosphorylase compare
NOLOHH_19420 ydbD -1.4 -1.8 Uncharacterized protein YdbD compare
NOLOHH_11360 yqfE -1.4 -1.5 Putative protein YqfE compare
NOLOHH_20635 dauA -1.3 -1.9 C4-dicarboxylic acid transporter DauA compare
NOLOHH_01270 clpP -1.3 -2.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_06730 trxA -1.3 -2.0 thioredoxin TrxA compare
NOLOHH_19780 -1.3 -1.7 hypothetical protein compare
NOLOHH_19555 ompN -1.3 -2.7 porin OmpN compare
NOLOHH_07540 rfaP -1.3 -3.8 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_06540 uvrD -1.3 -8.9 DNA helicase II compare
NOLOHH_22825 -1.3 -6.6 Packaged DNA stabilization protein gp10 compare
NOLOHH_19970 ycjY -1.3 -2.7 Uncharacterized protein YcjY compare
NOLOHH_03190 apaH -1.3 -4.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_17810 pykF -1.3 -2.6 pyruvate kinase PykF compare
NOLOHH_14200 sixA -1.3 -1.9 phosphohistidine phosphatase SixA compare
NOLOHH_22820 -1.3 -4.6 Phage-tail-NK domain-containing protein compare
NOLOHH_14780 apbE -1.2 -2.0 FAD:protein FMN transferase ApbE compare
NOLOHH_11230 tkt -1.2 -1.5 transketolase compare
NOLOHH_04505 hflC -1.2 -2.6 protease modulator HflC compare
NOLOHH_24495 -1.2 -0.9 lngG compare
NOLOHH_13320 iscX -1.2 -1.0 Fe-S cluster assembly protein IscX compare
NOLOHH_14460 nuoA -1.2 -2.0 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_09835 obgE -1.2 -1.2 GTPase ObgE compare
NOLOHH_22850 -1.2 -6.2 portal protein compare
NOLOHH_13035 srmB -1.2 -3.8 ATP-dependent RNA helicase SrmB compare
NOLOHH_18990 atoD -1.2 -2.2 succinyl-CoA--3-ketoacid-CoA transferase compare
NOLOHH_16010 pduA -1.2 -1.1 propanediol utilization microcompartment protein PduA compare
NOLOHH_03170 surA -1.2 -2.7 peptidylprolyl isomerase SurA compare
NOLOHH_22855 -1.2 -5.0 PBSX family phage terminase large subunit compare
NOLOHH_22860 -1.2 -2.9 terminase small subunit compare
NOLOHH_20735 fadR -1.2 -1.0 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_15225 mlrA -1.2 -3.4 HTH-type transcriptional regulator MlrA compare
NOLOHH_11415 pepP -1.2 -3.5 Xaa-Pro aminopeptidase compare
NOLOHH_17110 yeaY -1.2 -1.3 Slp family lipoprotein YeaY compare
NOLOHH_22215 ybjD -1.2 -3.6 Uncharacterized protein YbjD compare
NOLOHH_22845 -1.2 -3.0 phage capsid protein compare
NOLOHH_19165 vgrG,tssI -1.2 -2.5 type VI secretion system effector VgrG compare
NOLOHH_18115 hdhA -1.2 -1.4 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_13860 pdxK -1.2 -2.6 pyridoxine/pyridoxal/pyridoxamine kinase compare
NOLOHH_11120 yggT -1.2 -1.0 osmotic shock tolerance protein YggT compare
NOLOHH_16275 dsrB -1.1 -1.1 protein DsrB compare
NOLOHH_13300 iscA -1.1 -1.0 iron-sulfur cluster assembly protein IscA compare
NOLOHH_04165 treC -1.1 -3.8 alpha,alpha-phosphotrehalase compare
NOLOHH_18110 malI -1.1 -1.3 mal regulon transcriptional regulator MalI compare
NOLOHH_09355 aroE -1.1 -3.5 shikimate dehydrogenase compare
NOLOHH_21740 rlmI -1.1 -2.8 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI compare
NOLOHH_02825 acnB -1.1 -1.6 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_03075 leuD -1.1 -3.4 3-isopropylmalate dehydratase small subunit compare
NOLOHH_16050 ldtA -1.1 -2.4 L,D-transpeptidase compare
NOLOHH_16595 cheY -1.1 -1.2 chemotaxis regulatory protein CheY compare
NOLOHH_00720 -1.1 -2.9 cruciferin compare
NOLOHH_16700 -1.1 -1.8 putative transcriptional regulatory protein YebC compare
NOLOHH_16310 fliM -1.1 -1.0 flagellar motor switch protein FliM compare
NOLOHH_00170 -1.1 -1.1 hypothetical protein compare
NOLOHH_07125 -1.1 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_10425 nfeR -1.1 -1.5 DNA-binding transcriptional regulator NfeR compare
NOLOHH_24475 -1.1 -0.7 pilus assembly protein compare
NOLOHH_19505 feaB -1.0 -2.1 phenylacetaldehyde dehydrogenase compare
NOLOHH_23995 fes -1.0 -2.6 enterobactin/ferric enterobactin esterase compare
NOLOHH_22840 -1.0 -7.0 head protein compare
NOLOHH_19545 nifJ -1.0 -1.9 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
NOLOHH_24345 -1.0 -1.2 colicin transporter compare
NOLOHH_21560 yccJ -1.0 -1.5 Uncharacterized protein YccJ compare
NOLOHH_24535 -1.0 -2.1 Integrase catalytic domain-containing protein compare
NOLOHH_17370 ynjF -1.0 -2.6 Inner membrane protein YnjF compare
NOLOHH_21015 ycfJ -1.0 -1.1 Uncharacterized protein YcfJ compare
NOLOHH_09695 arcB -1.0 -3.1 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_24510 -1.0 -1.6 pilus biosynthesis protein compare
NOLOHH_16425 yecC -1.0 -1.6 L-cystine ABC transporter ATP-binding protein YecC compare
NOLOHH_18825 lsrR -1.0 -1.7 transcriptional regulator LsrR compare
NOLOHH_20110 puuB -1.0 -1.7 gamma-glutamylputrescine oxidase compare
NOLOHH_15520 baeR -1.0 -2.0 two-component system response regulator BaeR compare
NOLOHH_14490 nuoH -1.0 -3.2 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_19110 nhoA -1.0 -0.9 N-hydroxyarylamine O-acetyltransferase compare
NOLOHH_18720 marA -1.0 -1.3 MDR efflux pump AcrAB transcriptional activator MarA compare
NOLOHH_17970 ydhF -1.0 -1.5 Oxidoreductase YdhF compare
NOLOHH_15130 yeiS -1.0 -1.3 Uncharacterized protein YeiS compare
NOLOHH_21050 -1.0 -0.7 DUF1425 domain-containing protein compare
NOLOHH_19000 -1.0 -1.7 succinyl-CoA--3-ketoacid-CoA transferase compare
NOLOHH_14495 nuoI -1.0 -1.5 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_08975 yhfL -0.9 -2.6 Uncharacterized protein YhfL compare
NOLOHH_22085 ycaN -0.9 -1.0 Uncharacterized HTH-type transcriptional regulator YcaN compare
NOLOHH_00055 mazF -0.9 -2.7 endoribonuclease MazF compare
NOLOHH_22475 moeB -0.9 -1.9 molybdopterin-synthase adenylyltransferase MoeB compare
NOLOHH_22790 -0.9 -2.8 phage head-binding domain-containing protein compare
NOLOHH_22830 -0.9 -4.1 packaged DNA stabilization protein p27 compare
NOLOHH_07610 envC -0.9 -5.7 murein hydrolase activator EnvC compare
NOLOHH_00560 -0.9 -0.9 phage portal protein compare
NOLOHH_20950 potD -0.9 -3.0 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
NOLOHH_19015 -0.9 -1.3 3-hydroxybutyrate dehydrogenase compare
NOLOHH_22810 -0.9 -4.5 DNA transfer protein compare
NOLOHH_20690 ymgE -0.9 -0.9 UPF0410 protein YmgE compare
NOLOHH_17800 ldtE -0.9 -1.0 L,D-transpeptidase LdtE compare
NOLOHH_23105 pgl -0.9 -2.9 6-phosphogluconolactonase compare
NOLOHH_17025 rlmA -0.9 -1.3 23S rRNA (guanine(745)-N(1))-methyltransferase compare
NOLOHH_23000 ea10 -0.9 -1.3 Protein ea10 compare
NOLOHH_09955 deaD -0.9 -1.9 ATP-dependent RNA helicase DeaD compare
NOLOHH_14505 nuoK -0.9 -1.7 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_22905 ninH -0.9 -1.9 Protein ninH compare
NOLOHH_18385 tnp-ISNCY -0.9 -2.2 ISNCY family transposase compare
NOLOHH_02710 yadN -0.9 -0.8 Uncharacterized fimbrial-like protein YadN compare
NOLOHH_20815 -0.9 -1.2 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_10555 glgS -0.9 -1.1 cell surface composition regulator GlgS compare
NOLOHH_08145 bcsZ -0.9 -4.8 cellulose synthase complex periplasmic endoglucanase BcsZ compare
NOLOHH_05885 hslU -0.9 -1.6 HslU--HslV peptidase ATPase subunit compare
NOLOHH_14510 nuoL -0.9 -3.3 NADH-quinone oxidoreductase subunit L compare
NOLOHH_18200 pntB -0.9 -1.6 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta compare
NOLOHH_16490 yecR -0.9 -1.4 Uncharacterized protein YecR compare
NOLOHH_22405 deoR -0.9 -1.5 DNA-binding transcriptional repressor DeoR compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms