| | gene | name | fitness | t score | description | |
|---|
| PFR28_04933 | | -4.9 | -4.4 | Imidazole glycerol phosphate synthase subunit HisF | compare |
| PFR28_01838 | | -4.7 | -7.8 | Vanillin dehydrogenase | compare |
| PFR28_04071 | | -4.5 | -1.8 | Multifunctional CCA protein | compare |
| PFR28_01839 | | -4.4 | -16.1 | Long-chain-fatty-acid--CoA ligase FadD15 | compare |
| PFR28_04932 | | -4.4 | -7.4 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | compare |
| PFR28_03860 | | -4.3 | -7.2 | putative murein peptide carboxypeptidase | compare |
| PFR28_02821 | | -4.3 | -21.1 | 3-isopropylmalate dehydrogenase | compare |
| PFR28_00618 | | -4.2 | -16.3 | Pca regulon regulatory protein | compare |
| PFR28_01366 | | -4.2 | -10.7 | Sulfite reductase [ferredoxin] | compare |
| PFR28_01841 | | -4.1 | -9.7 | Oxidoreductase NdmD | conserved |
| PFR28_00620 | | -4.1 | -11.0 | 3-oxoadipate CoA-transferase subunit A | compare |
| PFR28_00624 | | -4.0 | -8.7 | Protocatechuate 3,4-dioxygenase alpha chain | compare |
| PFR28_00621 | | -4.0 | -13.1 | 3-oxoadipate CoA-transferase subunit B | compare |
| PFR28_05125 | | -3.8 | -10.0 | ATP phosphoribosyltransferase regulatory subunit | compare |
| PFR28_04986 | | -3.8 | -5.8 | Phosphoribosyl-AMP cyclohydrolase | compare |
| PFR28_01837 | | -3.8 | -14.4 | Hydroxycinnamoyl-CoA hydratase-lyase | compare |
| PFR28_03714 | | -3.8 | -14.1 | RNA polymerase-binding transcription factor DksA | compare |
| PFR28_03697 | | -3.7 | -14.6 | Ketol-acid reductoisomerase (NADP(+)) | compare |
| PFR28_02625 | | -3.7 | -13.3 | Isocitrate lyase | compare |
| PFR28_03856 | | -3.6 | -2.5 | LPS-assembly lipoprotein LptE | compare |
| PFR28_05016 | | -3.5 | -15.3 | Glutamate synthase [NADPH] small chain | compare |
| PFR28_00186 | | -3.5 | -7.0 | ATP phosphoribosyltransferase | compare |
| PFR28_01834 | | -3.5 | -14.6 | 3-(3-hydroxy-phenyl)propionate transporter | conserved |
| PFR28_02603 | | -3.4 | -8.2 | Siroheme synthase | compare |
| PFR28_00623 | | -3.4 | -8.2 | Protocatechuate 3,4-dioxygenase beta chain | compare |
| PFR28_01835 | | -3.4 | -20.7 | Porin-like protein NicP | compare |
| PFR28_00193 | | -3.4 | -13.6 | Sulfate adenylyltransferase subunit 2 | compare |
| PFR28_04834 | | -3.4 | -17.2 | L-threonine dehydratase biosynthetic IlvA | compare |
| PFR28_00627 | | -3.4 | -9.8 | 3-oxoadipate enol-lactonase 2 | compare |
| PFR28_04930 | | -3.3 | -10.4 | Imidazole glycerol phosphate synthase subunit HisH | compare |
| PFR28_00622 | | -3.3 | -4.0 | Beta-ketoadipyl-CoA thiolase | compare |
| PFR28_05244 | | -3.3 | -15.7 | Copper-exporting P-type ATPase | compare |
| PFR28_00403 | | -3.3 | -2.3 | Regulator of sigma-E protease RseP | compare |
| PFR28_01365 | | -3.3 | -7.5 | hypothetical protein | compare |
| PFR28_04030 | | -3.3 | -10.6 | hypothetical protein | compare |
| PFR28_03130 | | -3.2 | -3.3 | Streptothricin hydrolase | compare |
| PFR28_05015 | | -3.2 | -21.7 | Glutamate synthase [NADPH] large chain | compare |
| PFR28_00305 | | -3.2 | -11.4 | 2-isopropylmalate synthase | compare |
| PFR28_04246 | | -3.1 | -10.4 | Bifunctional methionine biosynthesis protein MetXA/MetW | compare |
| PFR28_02810 | | -3.1 | -15.7 | O-succinylhomoserine sulfhydrylase | compare |
| PFR28_04110 | | -3.1 | -16.2 | Malate synthase G | compare |
| PFR28_02719 | | -3.1 | -3.7 | Integration host factor subunit alpha | compare |
| PFR28_01842 | | -3.1 | -5.7 | Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1 | conserved |
| PFR28_04245 | | -3.1 | -14.2 | Homoserine O-succinyltransferase | compare |
| PFR28_02811 | | -3.1 | -5.5 | Amidophosphoribosyltransferase | compare |
| PFR28_00837 | | -3.1 | -8.6 | hypothetical protein | compare |
| PFR28_00194 | | -3.0 | -12.2 | Bifunctional enzyme CysN/CysC | compare |
| PFR28_00187 | | -3.0 | -11.9 | Histidinol dehydrogenase | compare |
| PFR28_00628 | | -2.9 | -5.9 | hypothetical protein | compare |
| PFR28_04278 | | -2.9 | -11.3 | Dihydroxy-acid dehydratase | compare |
| PFR28_02824 | | -2.9 | -8.5 | 3-isopropylmalate dehydratase large subunit | compare |
| PFR28_05105 | | -2.9 | -8.9 | Phosphoserine phosphatase SerB2 | compare |
| PFR28_00730 | | -2.9 | -3.7 | 5-oxoprolinase subunit C | compare |
| PFR28_04842 | | -2.9 | -7.0 | D-3-phosphoglycerate dehydrogenase | compare |
| PFR28_02484 | | -2.8 | -4.7 | UTP--glucose-1-phosphate uridylyltransferase | compare |
| PFR28_02823 | | -2.8 | -2.7 | 3-isopropylmalate dehydratase small subunit 1 | compare |
| PFR28_05071 | | -2.8 | -3.5 | D-inositol-3-phosphate glycosyltransferase | compare |
| PFR28_00851 | | -2.8 | -1.9 | Flagellum site-determining protein YlxH | compare |
| PFR28_03635 | | -2.7 | -4.1 | Malate:quinone oxidoreductase | compare |
| PFR28_04887 | | -2.7 | -3.7 | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | compare |
| PFR28_03698 | | -2.7 | -8.8 | Acetolactate synthase isozyme 3 small subunit | compare |
| PFR28_01142 | | -2.6 | -15.1 | Transaldolase | compare |
| PFR28_03363 | | -2.6 | -14.7 | Ornithine carbamoyltransferase 1, anabolic | compare |
| PFR28_04202 | | -2.6 | -4.3 | 5,10-methylenetetrahydrofolate reductase | compare |
| PFR28_04232 | | -2.6 | -5.4 | Glutathione synthetase | compare |
| PFR28_00966 | | -2.5 | -14.5 | HTH-type transcriptional regulator CysB | compare |
| PFR28_04929 | | -2.5 | -5.5 | Histidine biosynthesis bifunctional protein HisB | compare |
| PFR28_00626 | | -2.5 | -3.5 | 3-carboxy-cis,cis-muconate cycloisomerase | compare |
| PFR28_04985 | | -2.5 | -5.3 | Phosphoribosyl-ATP pyrophosphatase | compare |
| PFR28_03282 | | -2.5 | -8.0 | Arginine N-succinyltransferase subunit alpha | compare |
| PFR28_00421 | | -2.4 | -10.1 | S-formylglutathione hydrolase YeiG | compare |
| PFR28_00913 | | -2.4 | -6.7 | Integration host factor subunit beta | compare |
| PFR28_00419 | | -2.4 | -11.0 | HTH-type transcriptional regulator DmlR | conserved |
| PFR28_00633 | | -2.3 | -11.2 | HTH-type transcriptional regulator TtgR | compare |
| PFR28_04832 | | -2.3 | -10.1 | putative phosphatase | compare |
| PFR28_01930 | | -2.3 | -2.2 | HTH-type transcriptional regulator McbR | compare |
| PFR28_02616 | | -2.3 | -13.7 | Isocitrate dehydrogenase [NADP] | compare |
| PFR28_01265 | | -2.1 | -7.5 | (R)-benzylsuccinyl-CoA dehydrogenase | compare |
| PFR28_03596 | | -2.1 | -3.2 | Transcriptional regulator MraZ | compare |
| PFR28_03427 | | -2.1 | -6.3 | Sensor histidine kinase RcsC | compare |
| PFR28_03390 | | -2.0 | -10.4 | Copper resistance protein B | compare |
| PFR28_03223 | | -2.0 | -9.2 | GTP pyrophosphokinase | compare |
| PFR28_03412 | | -1.9 | -5.0 | Holliday junction ATP-dependent DNA helicase RuvB | compare |
| PFR28_03389 | | -1.9 | -14.6 | Copper resistance protein A | compare |
| PFR28_04628 | | -1.9 | -1.8 | Thiol:disulfide interchange protein DsbA | compare |
| PFR28_00420 | | -1.9 | -6.6 | S-(hydroxymethyl)glutathione dehydrogenase | compare |
| PFR28_00926 | | -1.9 | -2.5 | hypothetical protein | compare |
| PFR28_05212 | | -1.9 | -10.3 | Sensor histidine kinase RcsC | compare |
| PFR28_03612 | | -1.9 | -3.8 | Cell division protein ZapE | compare |
| PFR28_00855 | | -1.9 | -8.1 | hypothetical protein | compare |
| PFR28_03699 | | -1.8 | -3.3 | Acetolactate synthase isozyme 3 large subunit | compare |
| PFR28_04308 | | -1.8 | -1.2 | Amino-acid acetyltransferase | compare |
| PFR28_04565 | | -1.8 | -10.0 | Protein RarD | compare |
| PFR28_03296 | | -1.8 | -1.9 | hypothetical protein | compare |
| PFR28_04992 | | -1.8 | -1.5 | hypothetical protein | compare |
| PFR28_00356 | | -1.8 | -5.1 | Protein-glutamate methylesterase/protein-glutamine glutaminase | compare |
| PFR28_01319 | | -1.7 | -9.7 | 1,4-alpha-glucan branching enzyme GlgB | compare |
| PFR28_01060 | | -1.7 | -4.4 | HTH-type transcriptional repressor NanR | compare |
| PFR28_03854 | | -1.7 | -7.3 | hypothetical protein | compare |
| PFR28_00988 | | -1.7 | -7.2 | Sensor histidine kinase RcsC | compare |
| PFR28_04620 | | -1.7 | -2.7 | Zinc uptake regulation protein | compare |
| PFR28_04633 | | -1.7 | -3.5 | Alginate biosynthesis sensor protein KinB | compare |
| PFR28_04675 | | -1.7 | -1.5 | hypothetical protein | compare |
| PFR28_02846 | | -1.6 | -5.9 | Adaptive-response sensory-kinase SasA | compare |
| PFR28_03530 | | -1.6 | -1.9 | hypothetical protein | compare |
| PFR28_00853 | | -1.6 | -7.4 | Chemotaxis protein CheY | compare |
| PFR28_03611 | | -1.6 | -11.4 | HTH-type transcriptional regulator CdhR | compare |
| PFR28_00241 | | -1.6 | -4.0 | Disulfide bond formation protein B | compare |
| PFR28_00325 | | -1.6 | -3.3 | Inner membrane protein YpjD | compare |
| PFR28_03413 | | -1.6 | -3.4 | Holliday junction ATP-dependent DNA helicase RuvA | compare |
| PFR28_00572 | | -1.6 | -7.5 | HTH-type transcriptional regulator HexR | compare |
| PFR28_00839 | | -1.5 | -4.6 | hypothetical protein | compare |
| PFR28_05139 | | -1.5 | -2.5 | hypothetical protein | compare |
| PFR28_00861 | | -1.5 | -9.8 | Chemotaxis protein CheW | compare |
| PFR28_02449 | | -1.5 | -8.6 | putative branched-chain-amino-acid aminotransferase | compare |
| PFR28_01114 | | -1.5 | -6.5 | hypothetical protein | compare |
| PFR28_03463 | | -1.5 | -1.7 | hypothetical protein | compare |
| PFR28_00434 | | -1.5 | -3.1 | hypothetical protein | compare |
| PFR28_00188 | | -1.5 | -6.7 | Histidinol-phosphate aminotransferase | compare |
| PFR28_00089 | | -1.4 | -1.7 | Transcription termination/antitermination protein NusA | compare |
| PFR28_04782 | | -1.4 | -9.0 | hypothetical protein | compare |
| PFR28_00068 | | -1.4 | -0.9 | hypothetical protein | compare |
| PFR28_04564 | | -1.4 | -9.3 | Aspartate-semialdehyde dehydrogenase | compare |
| PFR28_05005 | | -1.4 | -6.7 | NADP-dependent malic enzyme | compare |
| PFR28_00159 | | -1.4 | -7.5 | hypothetical protein | compare |
| PFR28_03344 | | -1.4 | -1.3 | Ion-translocating oxidoreductase complex subunit A | compare |
| PFR28_00729 | | -1.4 | -6.6 | 5-oxoprolinase subunit B | compare |
| PFR28_00139 | | -1.3 | -7.1 | HTH-type transcriptional regulator LutR | compare |
| PFR28_00947 | | -1.3 | -6.5 | Acyl-CoA thioesterase 2 | compare |
| PFR28_02613 | | -1.3 | -7.5 | ATP-dependent Clp protease ATP-binding subunit ClpA | compare |
| PFR28_01182 | | -1.3 | -1.4 | hypothetical protein | compare |
| PFR28_04865 | | -1.3 | -0.9 | Glutamate--cysteine ligase | compare |
| PFR28_03255 | | -1.3 | -8.6 | Chemotaxis protein methyltransferase Cher2 | compare |
| PFR28_00472 | | -1.3 | -3.1 | Protein RecA | compare |
| PFR28_01317 | | -1.3 | -9.2 | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2 | compare |
| PFR28_00098 | | -1.3 | -5.7 | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | compare |
| PFR28_00965 | | -1.3 | -6.9 | hypothetical protein | compare |
| PFR28_03388 | | -1.3 | -8.2 | Quinolinate synthase A | compare |
| PFR28_03487 | | -1.2 | -7.1 | Adaptive-response sensory-kinase SasA | compare |
| PFR28_01592 | | -1.2 | -3.2 | hypothetical protein | compare |
| PFR28_00064 | | -1.2 | -7.9 | Pyruvate dehydrogenase complex repressor | compare |
| PFR28_01084 | | -1.2 | -2.3 | hypothetical protein | compare |
| PFR28_04233 | | -1.2 | -1.6 | hypothetical protein | compare |
| PFR28_04517 | | -1.2 | -7.8 | Oxaloacetate decarboxylase alpha chain | compare |
| PFR28_03837 | | -1.2 | -6.0 | Leucine-responsive regulatory protein | compare |
| PFR28_02608 | | -1.2 | -1.5 | DNA translocase FtsK | compare |
| PFR28_05134 | | -1.2 | -2.1 | hypothetical protein | compare |
| PFR28_00975 | | -1.2 | -4.5 | HTH-type transcriptional regulator HdfR | compare |
| PFR28_00695 | | -1.2 | -1.6 | Sulfur carrier protein TusA | compare |
| PFR28_03812 | | -1.2 | -8.7 | HTH-type transcriptional repressor NicS | compare |
| PFR28_03719 | | -1.1 | -3.3 | Poly(A) polymerase I | compare |
| PFR28_00500 | | -1.1 | -1.9 | hypothetical protein | compare |
| PFR28_03865 | | -1.1 | -5.0 | Endolytic peptidoglycan transglycosylase RlpA | compare |
| PFR28_04868 | | -1.1 | -1.9 | Transcriptional regulatory protein OmpR | compare |
| PFR28_03846 | | -1.1 | -4.0 | hypothetical protein | compare |
| PFR28_01230 | | -1.1 | -1.8 | Lon protease | compare |
| PFR28_03482 | | -1.1 | -6.9 | Sensor histidine kinase RcsC | compare |
| PFR28_03724 | | -1.1 | -3.4 | Glucose-6-phosphate isomerase | compare |
| PFR28_00625 | | -1.1 | -7.1 | Alpha-ketoglutarate permease | compare |
| PFR28_00873 | | -1.1 | -4.3 | hypothetical protein | compare |
| PFR28_00106 | | -1.1 | -4.6 | Tagatose-6-phosphate kinase | compare |
| PFR28_04052 | | -1.1 | -8.4 | hypothetical protein | compare |
| PFR28_03721 | | -1.1 | -2.9 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | compare |
| PFR28_02201 | | -1.1 | -1.8 | Chaperone SurA | compare |
| PFR28_04051 | | -1.1 | -5.6 | Inner membrane ABC transporter permease protein YdcV | compare |
| PFR28_03310 | | -1.0 | -3.2 | Peptidyl-tRNA hydrolase ArfB | compare |
| PFR28_03387 | | -1.0 | -1.5 | hypothetical protein | compare |
| PFR28_04461 | | -1.0 | -1.9 | hypothetical protein | compare |
| PFR28_04963 | | -1.0 | -5.3 | HTH-type transcriptional repressor NagR | compare |
| PFR28_02094 | | -1.0 | -1.6 | Glycerol-3-phosphate regulon repressor | compare |
| PFR28_03483 | | -1.0 | -7.6 | hypothetical protein | compare |
| PFR28_03485 | | -1.0 | -5.0 | Cytochrome c551 peroxidase | compare |
| PFR28_02426 | | -1.0 | -6.8 | HTH-type transcriptional regulator MurR | compare |
| PFR28_02314 | | -1.0 | -2.1 | Fumarate and nitrate reduction regulatory protein | compare |
| PFR28_04953 | | -1.0 | -7.4 | Maltodextrin phosphorylase | compare |
| PFR28_01031 | | -1.0 | -4.0 | Sensor protein QseC | compare |
| PFR28_01109 | | -1.0 | -2.6 | hypothetical protein | compare |
| PFR28_04931 | | -1.0 | -1.7 | hypothetical protein | compare |
| PFR28_00690 | | -1.0 | -3.4 | RNA polymerase sigma-H factor | compare |
| PFR28_04936 | | -1.0 | -2.3 | Carboxy-terminal processing protease CtpB | compare |
| PFR28_01156 | | -1.0 | -4.2 | hypothetical protein | compare |
| PFR28_00976 | | -1.0 | -5.6 | hypothetical protein | compare |
| PFR28_04485 | | -1.0 | -2.1 | Phosphate-specific transport system accessory protein PhoU | compare |
| PFR28_00104 | | -1.0 | -4.8 | Catabolite repressor/activator | compare |
| PFR28_01231 | | -1.0 | -2.0 | Peptidyl-prolyl cis-trans isomerase D | compare |
| PFR28_03298 | | -1.0 | -5.3 | Nucleoid occlusion factor SlmA | compare |
| PFR28_03266 | | -1.0 | -2.2 | hypothetical protein | compare |
| PFR28_03192 | | -0.9 | -1.1 | hypothetical protein | compare |
| PFR28_00593 | | -0.9 | -7.4 | HTH-type transcriptional regulator GntR | compare |
| PFR28_00764 | | -0.9 | -1.8 | hypothetical protein | compare |
| PFR28_00331 | | -0.9 | -3.0 | Tyrosine recombinase XerD | compare |
| PFR28_03486 | | -0.9 | -5.6 | Adaptive-response sensory-kinase SasA | compare |
| PFR28_03289 | | -0.9 | -8.0 | Acetyl-coenzyme A synthetase | compare |
| PFR28_04325 | | -0.9 | -4.4 | 5-formyltetrahydrofolate cyclo-ligase | compare |
| PFR28_04518 | | -0.9 | -5.4 | 2-oxoglutarate carboxylase small subunit | compare |
| PFR28_04420 | | -0.9 | -4.8 | Ribonuclease PH | compare |
| PFR28_04378 | | -0.9 | -2.8 | Tyrosine recombinase XerC | compare |
| PFR28_00460 | | -0.9 | -2.0 | hypothetical protein | compare |
| PFR28_01313 | | -0.9 | -1.7 | hypothetical protein | compare |
| PFR28_03188 | | -0.9 | -4.3 | hypothetical protein | compare |