Experiment set6S83 for Escherichia coli ECOR27

Compare to:

Control_ECOR27

200 most important genes:

  gene name fitness t score description  
NOLOHH_15455 gatZ -4.4 -3.0 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_15160 yohP -4.1 -1.6 protein YohP compare
NOLOHH_10640 ygiN -3.9 -2.5 putative quinol monooxygenase YgiN compare
NOLOHH_04525 miaA -3.7 -2.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_00565 -3.6 -2.0 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_19110 nhoA -3.5 -3.3 N-hydroxyarylamine O-acetyltransferase compare
NOLOHH_19710 -3.4 -2.3 transcriptional regulator compare
NOLOHH_07535 rfaG -3.4 -3.3 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_19045 yddM -3.4 -3.2 HigA family addiction module antitoxin compare
NOLOHH_19965 pgrR -3.2 -3.8 DNA-binding transcriptional regulator PgrR compare
NOLOHH_05815 metL -3.2 -12.5 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_11480 sdhE -3.0 -1.2 FAD assembly factor SdhE compare
NOLOHH_14200 sixA -3.0 -2.8 phosphohistidine phosphatase SixA compare
NOLOHH_09835 obgE -2.9 -1.6 GTPase ObgE compare
NOLOHH_09845 greA -2.9 -1.6 transcription elongation factor GreA compare
NOLOHH_19420 ydbD -2.9 -2.7 Uncharacterized protein YdbD compare
NOLOHH_14500 nuoJ -2.8 -3.8 NADH-quinone oxidoreductase subunit J compare
NOLOHH_02825 acnB -2.8 -2.7 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_00575 -2.7 -2.1 DNA-packaging protein compare
NOLOHH_14460 nuoA -2.7 -3.1 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_16905 holE -2.7 -2.5 DNA polymerase III subunit theta compare
NOLOHH_20460 galU -2.7 -1.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_18245 mlc -2.7 -1.8 DNA-binding transcriptional repressor Mlc compare
NOLOHH_18380 -2.6 -1.5 DUF977 domain-containing protein compare
NOLOHH_21130 yceD -2.6 -3.0 23S rRNA accumulation protein YceD compare
NOLOHH_19430 paaY -2.6 -1.2 phenylacetic acid degradation protein PaaY compare
NOLOHH_13300 iscA -2.6 -1.8 iron-sulfur cluster assembly protein IscA compare
NOLOHH_18240 ynfL -2.6 -1.2 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_16285 fliR -2.6 -1.4 flagellar type III secretion system protein FliR compare
NOLOHH_18955 ddpX -2.5 -2.6 D-alanyl-D-alanine dipeptidase compare
NOLOHH_06665 wzyE -2.5 -6.2 ECA oligosaccharide polymerase compare
NOLOHH_16700 -2.5 -2.9 putative transcriptional regulatory protein YebC compare
NOLOHH_17620 btuC -2.5 -2.9 vitamin B12 ABC transporter permease BtuC compare
NOLOHH_07575 rfaF -2.4 -2.7 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_06530 corA -2.3 -3.1 magnesium/cobalt transporter CorA compare
NOLOHH_00620 -2.3 -1.2 Orf33, orf151, orf56, orf96, rus, orf45, orf8, orf127, and nmpC genes compare
NOLOHH_16505 ftnB -2.3 -1.2 non-heme ferritin-like protein compare
NOLOHH_09695 arcB -2.3 -5.2 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_24040 ybdJ -2.2 -1.1 Uncharacterized protein YbdJ compare
NOLOHH_20465 rssB -2.2 -3.0 two-component system response regulator RssB compare
NOLOHH_06550 xerC -2.2 -3.6 tyrosine recombinase XerC compare
NOLOHH_21940 aspC -2.2 -1.6 aspartate transaminase compare
NOLOHH_21450 pgaB -2.2 -1.8 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
NOLOHH_16845 zwf -2.2 -1.7 glucose-6-phosphate dehydrogenase compare
NOLOHH_01960 ykgR -2.2 -1.2 Uncharacterized membrane protein YkgR compare
NOLOHH_12165 -2.2 -1.6 LemA family compare
NOLOHH_01245 ppiD -2.2 -1.6 peptidylprolyl isomerase compare
NOLOHH_14475 nuoE -2.1 -2.2 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_11230 tkt -2.1 -2.3 transketolase compare
NOLOHH_00600 rrrD -2.1 -3.3 lysozyme RrrD compare
NOLOHH_05830 metJ -2.1 -1.4 met regulon transcriptional regulator MetJ compare
NOLOHH_20440 ychT -2.0 -1.5 Protein YchT compare
NOLOHH_14340 ubiX -2.0 -2.3 flavin prenyltransferase UbiX compare
NOLOHH_20895 nudJ -2.0 -1.3 phosphatase NudJ compare
NOLOHH_09400 Thr_trna -2.0 -1.7 tRNA-Thr(ggt) compare
NOLOHH_18805 lsrB -2.0 -3.2 autoinducer 2 ABC transporter substrate-binding protein LsrB compare
NOLOHH_07125 -2.0 -3.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_13075 lepA -1.9 -4.0 translation elongation factor 4 compare
NOLOHH_24460 -1.9 -2.0 LngX2 compare
NOLOHH_22195 cspD -1.9 -1.8 cold shock-like protein CspD compare
NOLOHH_21500 -1.9 -1.4 hypothetical protein compare
NOLOHH_00385 -1.9 -4.0 hypothetical protein compare
NOLOHH_17025 rlmA -1.9 -2.2 23S rRNA (guanine(745)-N(1))-methyltransferase compare
NOLOHH_16080 -1.9 -1.2 hypothetical protein compare
NOLOHH_03300 fkpB -1.8 -1.2 FKBP-type peptidyl-prolyl cis-trans isomerase compare
NOLOHH_11495 xerD -1.8 -3.7 site-specific tyrosine recombinase XerD compare
NOLOHH_06675 wzxE -1.8 -3.8 lipid III flippase WzxE compare
NOLOHH_17270 yeaC -1.8 -1.9 Uncharacterized protein YeaC compare
NOLOHH_04005 Leu_trna -1.7 -1.0 tRNA-Leu(caa) compare
NOLOHH_22050 serC -1.7 -4.9 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_21560 yccJ -1.7 -1.6 Uncharacterized protein YccJ compare
NOLOHH_14810 yojO -1.7 -1.0 Uncharacterized protein YojO compare
NOLOHH_20185 rnb -1.7 -2.2 exoribonuclease II compare
NOLOHH_23030 -1.7 -2.2 siphovirus Gp157 family protein compare
NOLOHH_15545 mdtA -1.7 -2.7 multidrug efflux RND transporter subunit MdtA compare
NOLOHH_20865 bluF -1.6 -1.2 blue light-responsive regulator BluF compare
NOLOHH_21615 yccM -1.6 -3.5 Putative electron transport protein YccM compare
NOLOHH_03030 cra -1.6 -5.3 catabolite repressor/activator compare
NOLOHH_16855 kdgA -1.6 -1.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_01270 clpP -1.6 -2.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_20015 ycjW -1.6 -1.4 Uncharacterized HTH-type transcriptional regulator YcjW compare
NOLOHH_23065 -1.6 -3.8 hypothetical protein compare
NOLOHH_04165 treC -1.6 -4.4 alpha,alpha-phosphotrehalase compare
NOLOHH_02845 aceE -1.6 -1.5 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_19330 ydcJ -1.5 -1.5 Uncharacterized protein YdcJ compare
NOLOHH_14470 nuoC -1.5 -4.6 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_02510 skp -1.5 -1.5 molecular chaperone Skp compare
NOLOHH_17630 btuD -1.5 -1.4 vitamin B12 ABC transporter ATP-binding protein BtuD compare
NOLOHH_23310 odhB -1.5 -1.4 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_05225 dgkA -1.5 -2.0 diacylglycerol kinase compare
NOLOHH_06920 mnmG -1.5 -3.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_24675 finO -1.5 -6.4 Fertility inhibition protein compare
NOLOHH_22110 dmsB -1.4 -3.6 dimethylsulfoxide reductase subunit B compare
NOLOHH_23245 tolA -1.4 -2.9 cell envelope integrity protein TolA compare
NOLOHH_11425 ubiI -1.4 -1.5 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_17565 yniD -1.4 -0.9 Uncharacterized protein YniD compare
NOLOHH_16305 fliN -1.4 -1.6 flagellar motor switch protein FliN compare
NOLOHH_15885 yeeD -1.4 -1.8 Putative sulfur carrier protein YeeD compare
NOLOHH_04950 phnO -1.4 -1.7 aminoalkylphosphonate N-acetyltransferase compare
NOLOHH_20110 puuB -1.4 -2.0 gamma-glutamylputrescine oxidase compare
NOLOHH_18060 rsxD -1.4 -2.7 electron transport complex subunit RsxD compare
NOLOHH_13035 srmB -1.4 -5.2 ATP-dependent RNA helicase SrmB compare
NOLOHH_06540 uvrD -1.4 -8.6 DNA helicase II compare
NOLOHH_14420 yfbV -1.4 -1.8 UPF0208 membrane protein YfbV compare
NOLOHH_05230 plsB -1.4 -1.4 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_13645 ypfM -1.4 -1.0 protein YpfM compare
NOLOHH_17365 nudG -1.4 -1.4 CTP pyrophosphohydrolase compare
NOLOHH_14515 nuoM -1.4 -4.1 NADH-quinone oxidoreductase subunit M compare
NOLOHH_17655 aroH -1.4 -2.0 3-deoxy-7-phosphoheptulonate synthase AroH compare
NOLOHH_08495 yhhL -1.4 -1.2 DUF1145 domain-containing protein compare
NOLOHH_24335 -1.4 -2.5 YdeA protein compare
NOLOHH_19780 -1.4 -1.7 hypothetical protein compare
NOLOHH_05885 hslU -1.3 -2.3 HslU--HslV peptidase ATPase subunit compare
NOLOHH_14505 nuoK -1.3 -1.3 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_20455 hns -1.3 -2.1 DNA-binding transcriptional regulator H-NS compare
NOLOHH_24495 -1.3 -1.1 lngG compare
NOLOHH_19215 ydcY -1.3 -1.1 Uncharacterized protein YdcY compare
NOLOHH_03190 apaH -1.3 -4.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_08375 pitA -1.3 -4.3 inorganic phosphate transporter PitA compare
NOLOHH_17225 dgcJ -1.3 -2.1 diguanylate cyclase DgcJ compare
NOLOHH_22835 -1.3 -4.5 hypothetical protein compare
NOLOHH_12545 recA -1.3 -2.1 recombinase RecA compare
NOLOHH_19740 tolA -1.3 -1.1 cell envelope integrity protein TolA compare
NOLOHH_18325 -1.3 -0.8 DNA-binding protein compare
NOLOHH_13070 rseC -1.3 -3.0 SoxR-reducing system protein RseC compare
NOLOHH_15655 wcaC -1.3 -2.6 colanic acid biosynthesis glycosyltransferase WcaC compare
NOLOHH_22845 -1.3 -5.3 phage capsid protein compare
NOLOHH_22880 -1.3 -5.2 phage holin, lambda family compare
NOLOHH_11670 escR -1.3 -0.8 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
NOLOHH_23020 -1.3 -3.4 hypothetical protein compare
NOLOHH_04350 tnpA -1.3 -2.2 IS200/IS605-like element IS609 family transposase compare
NOLOHH_15520 baeR -1.3 -1.6 two-component system response regulator BaeR compare
NOLOHH_18050 rsxE -1.3 -1.6 electron transport complex subunit RsxE compare
NOLOHH_22985 -1.3 -1.1 antitermination protein N compare
NOLOHH_20735 fadR -1.3 -1.1 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_02690 dksA -1.2 -2.5 RNA polymerase-binding protein DksA compare
NOLOHH_23495 ybfE -1.2 -1.8 LexA regulated protein compare
NOLOHH_23510 fur -1.2 -1.5 ferric iron uptake transcriptional regulator compare
NOLOHH_16335 fliH -1.2 -1.2 flagellar assembly protein FliH compare
NOLOHH_21890 ssuE -1.2 -0.9 NADPH-dependent FMN reductase compare
NOLOHH_06300 dsbA -1.2 -2.4 thiol:disulfide interchange protein DsbA compare
NOLOHH_20295 rluB -1.2 -2.6 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_18145 manA -1.2 -1.4 mannose-6-phosphate isomerase compare
NOLOHH_14485 nuoG -1.2 -3.8 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_15930 pduT -1.2 -3.8 propanediol utilization microcompartment protein PduT compare
NOLOHH_14845 napB -1.2 -1.7 nitrate reductase cytochrome c-type subunit compare
NOLOHH_00445 -1.2 -2.2 peptidyl-arginine deiminase compare
NOLOHH_18990 atoD -1.2 -2.0 succinyl-CoA--3-ketoacid-CoA transferase compare
NOLOHH_23480 pgm -1.2 -2.2 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_15485 yegS -1.2 -1.6 lipid kinase YegS compare
NOLOHH_23350 fimA -1.2 -1.0 type 1 fimbrial protein compare
NOLOHH_24620 -1.2 -1.2 ISSfl4 ORF1 compare
NOLOHH_22715 moaE -1.2 -2.0 molybdopterin synthase catalytic subunit MoaE compare
NOLOHH_00150 -1.2 -3.0 hypothetical protein compare
NOLOHH_06520 -1.2 -0.9 DUF3289 domain-containing protein compare
NOLOHH_20905 hflD -1.1 -0.9 high frequency lysogenization protein HflD compare
NOLOHH_04085 rraB -1.1 -1.8 ribonuclease E inhibitor RraB compare
NOLOHH_08775 -1.1 -3.0 NfuA family Fe-S biogenesis protein compare
NOLOHH_21045 lpoB -1.1 -2.8 penicillin-binding protein activator LpoB compare
NOLOHH_13185 glyA -1.1 -2.4 serine hydroxymethyltransferase compare
NOLOHH_00720 -1.1 -1.7 cruciferin compare
NOLOHH_18065 rsxC -1.1 -3.3 electron transport complex subunit RsxC compare
NOLOHH_00360 -1.1 -6.8 relaxase/mobilization nuclease compare
NOLOHH_22045 aroA -1.1 -1.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
NOLOHH_17330 ydjA -1.1 -0.8 NAD(P)H nitroreductase compare
NOLOHH_22885 Thr_trna -1.1 -1.4 tRNA-Thr(tgt) compare
NOLOHH_14480 nuoF -1.1 -3.9 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_02630 yadW -1.1 -1.0 Protein YadW compare
NOLOHH_23060 -1.1 -2.5 IS1 orfB compare
NOLOHH_13860 pdxK -1.1 -1.3 pyridoxine/pyridoxal/pyridoxamine kinase compare
NOLOHH_17680 ydiS -1.1 -1.4 putative electron transfer flavoprotein-quinone oxidoreductase YdiS compare
NOLOHH_00525 -1.1 -1.0 Tail tube terminator protein compare
NOLOHH_02125 dinJ -1.1 -1.5 type II toxin-antitoxin system antitoxin DinJ compare
NOLOHH_16135 rfaF -1.0 -1.1 Glycosyltransferase family 9 (heptosyltransferase) compare
NOLOHH_11790 yqeH -1.0 -1.3 Uncharacterized protein YqeH compare
NOLOHH_19640 -1.0 -1.1 Phage tail tube protein compare
NOLOHH_04190 yjgA -1.0 -4.0 ribosome-associated protein compare
NOLOHH_17875 ydhQ -1.0 -1.6 Uncharacterized protein YdhQ compare
NOLOHH_24530 -1.0 -1.6 HTH-21 domain-containing protein compare
NOLOHH_02620 yadS -1.0 -1.3 UPF0126 inner membrane protein YadS compare
NOLOHH_14160 Arg_trna -1.0 -1.4 tRNA-Arg(cct) compare
NOLOHH_00700 -1.0 -2.8 cell division inhibitor protein compare
NOLOHH_00660 -1.0 -2.3 protein ren compare
NOLOHH_20745 dsbB -1.0 -1.9 disulfide bond formation protein DsbB compare
NOLOHH_16130 shiA -1.0 -1.7 shikimate transporter compare
NOLOHH_11515 lysS -1.0 -1.5 lysine--tRNA ligase compare
NOLOHH_11365 rpiA -1.0 -1.4 ribose-5-phosphate isomerase RpiA compare
NOLOHH_22275 artP -1.0 -2.1 arginine ABC transporter ATP-binding protein ArtP compare
NOLOHH_05695 sthA -1.0 -4.0 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_16185 msrP -1.0 -3.0 protein-methionine-sulfoxide reductase catalytic subunit MsrP compare
NOLOHH_21465 phoH -1.0 -2.4 phosphate starvation-inducible protein PhoH compare
NOLOHH_18730 marC -1.0 -1.0 NAAT family transporter MarC compare
NOLOHH_18935 digH -1.0 -0.8 Glycosyl hydrolase DigH compare
NOLOHH_22825 -1.0 -5.0 Packaged DNA stabilization protein gp10 compare
NOLOHH_20485 Tyr_trna -1.0 -0.9 tRNA-Tyr(gta) compare
NOLOHH_07540 rfaP -1.0 -3.2 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_02285 hcp1,tssD1 -1.0 -1.1 type VI secretion system protein, Hcp family compare
NOLOHH_19255 ydcR -1.0 -1.4 Uncharacterized HTH-type transcriptional regulator YdcR compare
NOLOHH_07670 -1.0 -2.0 DUF3251 domain-containing protein compare
NOLOHH_09730 ptsN -1.0 -1.2 PTS IIA-like nitrogen regulatory protein PtsN compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in no phage control\ experiments

For no phage control\ No phage across organisms