Experiment set6S80 for Escherichia coli ECOR27

Compare to:

CPL00159

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -6.0 -11.6 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -5.7 -4.0 O-antigen ligase RfaL compare
NOLOHH_07560 rfaB -5.6 -3.9 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_15730 -5.3 -7.2 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07545 waaO -4.5 -3.1 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_06675 wzxE -4.2 -5.0 lipid III flippase WzxE compare
NOLOHH_24695 vapB -3.8 -2.6 toxin-antitoxin system antitoxin VapB compare
NOLOHH_23145 galE -3.7 -3.6 UDP-glucose 4-epimerase GalE compare
NOLOHH_07555 rfaJ -3.7 -3.5 glucosyltransferase compare
NOLOHH_06665 wzyE -3.6 -8.7 ECA oligosaccharide polymerase compare
NOLOHH_07575 rfaF -3.5 -2.4 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_07535 rfaG -3.2 -4.8 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_20460 galU -3.0 -2.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_09835 obgE -3.0 -2.1 GTPase ObgE compare
NOLOHH_05815 metL -2.9 -11.8 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_06530 corA -2.9 -2.8 magnesium/cobalt transporter CorA compare
NOLOHH_00385 -2.8 -2.2 hypothetical protein compare
NOLOHH_06550 xerC -2.8 -3.8 tyrosine recombinase XerC compare
NOLOHH_22605 ybiJ -2.8 -2.8 DUF1471 domain-containing protein compare
NOLOHH_24460 -2.7 -1.5 LngX2 compare
NOLOHH_24675 finO -2.7 -9.0 Fertility inhibition protein compare
NOLOHH_15220 yohO -2.6 -1.8 protein YohO compare
NOLOHH_20455 hns -2.5 -4.5 DNA-binding transcriptional regulator H-NS compare
NOLOHH_23510 fur -2.5 -2.4 ferric iron uptake transcriptional regulator compare
NOLOHH_06395 rfaH -2.4 -6.7 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_16845 zwf -2.3 -2.2 glucose-6-phosphate dehydrogenase compare
NOLOHH_23480 pgm -2.3 -3.0 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_17785 sufD -2.2 -1.8 Fe-S cluster assembly protein SufD compare
NOLOHH_19620 gp18 -2.2 -1.5 phage minor tail protein L compare
NOLOHH_14200 sixA -2.2 -2.7 phosphohistidine phosphatase SixA compare
NOLOHH_14475 nuoE -2.2 -3.3 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_23485 seqA -2.2 -2.5 replication initiation negative regulator SeqA compare
NOLOHH_13055 rseA -2.1 -2.5 anti-sigma-E factor RseA compare
NOLOHH_02510 skp -2.0 -2.3 molecular chaperone Skp compare
NOLOHH_24760 trbA -2.0 -2.3 conjugal transfer protein TrbA compare
NOLOHH_13310 hscA -1.9 -1.8 Fe-S protein assembly chaperone HscA compare
NOLOHH_02845 aceE -1.9 -1.8 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_07125 -1.8 -2.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_19330 ydcJ -1.8 -2.0 Uncharacterized protein YdcJ compare
NOLOHH_14305 truA -1.8 -4.5 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_14470 nuoC -1.8 -5.5 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_06540 uvrD -1.7 -11.0 DNA helicase II compare
NOLOHH_11495 xerD -1.7 -3.5 site-specific tyrosine recombinase XerD compare
NOLOHH_03190 apaH -1.7 -5.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_22050 serC -1.7 -7.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_18660 dgcZ -1.7 -1.8 diguanylate cyclase DgcZ compare
NOLOHH_02825 acnB -1.7 -2.4 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_04150 mgtL -1.6 -1.6 mgtA leader peptide compare
NOLOHH_18380 -1.6 -1.8 DUF977 domain-containing protein compare
NOLOHH_17755 menI -1.6 -1.3 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
NOLOHH_20735 fadR -1.6 -1.5 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_22890 Asn_trna -1.6 -3.1 tRNA-Asn(gtt) compare
NOLOHH_18060 rsxD -1.6 -3.1 electron transport complex subunit RsxD compare
NOLOHH_05230 plsB -1.6 -2.0 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_05830 metJ -1.6 -2.0 met regulon transcriptional regulator MetJ compare
NOLOHH_23250 tolR -1.5 -2.3 colicin uptake protein TolR compare
NOLOHH_12545 recA -1.5 -2.9 recombinase RecA compare
NOLOHH_22905 ninH -1.5 -4.0 Protein ninH compare
NOLOHH_24755 -1.5 -1.0 toxin ArtA compare
NOLOHH_09730 ptsN -1.4 -2.3 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_18955 ddpX -1.4 -2.3 D-alanyl-D-alanine dipeptidase compare
NOLOHH_08375 pitA -1.4 -4.4 inorganic phosphate transporter PitA compare
NOLOHH_14250 aroC -1.4 -2.5 chorismate synthase compare
NOLOHH_21170 flgI -1.4 -2.4 flagellar basal body P-ring protein FlgI compare
NOLOHH_00445 -1.4 -2.8 peptidyl-arginine deiminase compare
NOLOHH_06920 mnmG -1.4 -3.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_08495 yhhL -1.4 -1.6 DUF1145 domain-containing protein compare
NOLOHH_05885 hslU -1.4 -3.0 HslU--HslV peptidase ATPase subunit compare
NOLOHH_12805 rnfH -1.4 -1.4 RnfH family protein compare
NOLOHH_02285 hcp1,tssD1 -1.4 -1.4 type VI secretion system protein, Hcp family compare
NOLOHH_22935 ninB -1.3 -4.2 Protein ninB compare
NOLOHH_08605 yrhA -1.3 -1.1 protein YrhA compare
NOLOHH_20485 Tyr_trna -1.3 -1.4 tRNA-Tyr(gta) compare
NOLOHH_23060 -1.3 -2.8 IS1 orfB compare
NOLOHH_20465 rssB -1.3 -2.6 two-component system response regulator RssB compare
NOLOHH_01245 ppiD -1.3 -1.6 peptidylprolyl isomerase compare
NOLOHH_22880 -1.3 -6.5 phage holin, lambda family compare
NOLOHH_08775 -1.3 -4.0 NfuA family Fe-S biogenesis protein compare
NOLOHH_22835 -1.3 -4.1 hypothetical protein compare
NOLOHH_05965 pfkA -1.3 -4.0 6-phosphofructokinase compare
NOLOHH_09610 zapG -1.3 -4.4 Z-ring associated protein ZapG compare
NOLOHH_14510 nuoL -1.3 -4.6 NADH-quinone oxidoreductase subunit L compare
NOLOHH_15615 dcd -1.3 -2.1 dCTP deaminase compare
NOLOHH_09695 arcB -1.3 -3.7 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_23040 -1.2 -5.2 hypothetical protein compare
NOLOHH_03170 surA -1.2 -2.6 peptidylprolyl isomerase SurA compare
NOLOHH_22820 -1.2 -4.0 Phage-tail-NK domain-containing protein compare
NOLOHH_22850 -1.2 -6.5 portal protein compare
NOLOHH_19710 -1.2 -2.1 transcriptional regulator compare
NOLOHH_23245 tolA -1.2 -3.2 cell envelope integrity protein TolA compare
NOLOHH_22840 -1.2 -8.5 head protein compare
NOLOHH_17210 nimR -1.2 -3.4 DNA-binding transcriptional regulator NimR compare
NOLOHH_16100 -1.2 -2.5 integrase compare
NOLOHH_21560 yccJ -1.2 -2.2 Uncharacterized protein YccJ compare
NOLOHH_10650 ygiZ -1.2 -3.0 Inner membrane protein YgiZ compare
NOLOHH_13035 srmB -1.2 -5.1 ATP-dependent RNA helicase SrmB compare
NOLOHH_04165 treC -1.2 -3.6 alpha,alpha-phosphotrehalase compare
NOLOHH_22825 -1.2 -6.4 Packaged DNA stabilization protein gp10 compare
NOLOHH_05490 hupA -1.1 -1.0 DNA-binding protein HU-alpha compare
NOLOHH_23045 -1.1 -3.0 hypothetical protein compare
NOLOHH_18240 ynfL -1.1 -1.5 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_15485 yegS -1.1 -2.2 lipid kinase YegS compare
NOLOHH_14420 yfbV -1.1 -2.0 UPF0208 membrane protein YfbV compare
NOLOHH_14520 nuoN -1.1 -3.3 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_09455 -1.1 -1.4 DUF2556 domain-containing protein compare
NOLOHH_17810 pykF -1.1 -2.1 pyruvate kinase PykF compare
NOLOHH_17110 yeaY -1.1 -1.3 Slp family lipoprotein YeaY compare
NOLOHH_18420 quuQ -1.1 -3.8 Prophage antitermination Q-like protein QuuQ compare
NOLOHH_23235 pal -1.1 -1.9 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_14465 nuoB -1.1 -4.1 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_18935 digH -1.1 -1.0 Glycosyl hydrolase DigH compare
NOLOHH_20440 ychT -1.1 -1.4 Protein YchT compare
NOLOHH_21090 pabC -1.1 -1.2 aminodeoxychorismate lyase compare
NOLOHH_09400 Thr_trna -1.1 -1.5 tRNA-Thr(ggt) compare
NOLOHH_08720 glpD -1.1 -4.2 glycerol-3-phosphate dehydrogenase compare
NOLOHH_22845 -1.1 -5.0 phage capsid protein compare
NOLOHH_09845 greA -1.1 -1.2 transcription elongation factor GreA compare
NOLOHH_22855 -1.1 -4.3 PBSX family phage terminase large subunit compare
NOLOHH_17355 gdhA -1.0 -1.6 NADP-specific glutamate dehydrogenase compare
NOLOHH_09875 secG -1.0 -1.5 preprotein translocase subunit SecG compare
NOLOHH_24620 -1.0 -1.3 ISSfl4 ORF1 compare
NOLOHH_14460 nuoA -1.0 -2.1 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_14480 nuoF -1.0 -4.2 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_23035 -1.0 -2.7 DUF5405 domain-containing protein compare
NOLOHH_17565 yniD -1.0 -0.9 Uncharacterized protein YniD compare
NOLOHH_20225 lapA -1.0 -1.0 lipopolysaccharide assembly protein LapA compare
NOLOHH_05240 ubiC -1.0 -2.7 chorismate lyase compare
NOLOHH_14490 nuoH -1.0 -2.4 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_09590 argR -1.0 -2.5 transcriptional regulator ArgR compare
NOLOHH_14340 ubiX -1.0 -1.7 flavin prenyltransferase UbiX compare
NOLOHH_14515 nuoM -1.0 -3.4 NADH-quinone oxidoreductase subunit M compare
NOLOHH_22930 -0.9 -4.1 phage N-6-adenine-methyltransferase compare
NOLOHH_06385 fre -0.9 -4.7 NAD(P)H-flavin reductase compare
NOLOHH_05225 dgkA -0.9 -2.1 diacylglycerol kinase compare
NOLOHH_23000 ea10 -0.9 -2.3 Protein ea10 compare
NOLOHH_17900 punR -0.9 -3.1 DNA-binding transcriptional activator PunR compare
NOLOHH_11365 rpiA -0.9 -1.4 ribose-5-phosphate isomerase RpiA compare
NOLOHH_19845 recT -0.9 -1.3 recombination protein RecT compare
NOLOHH_00940 -0.9 -1.0 RHS repeat protein compare
NOLOHH_14485 nuoG -0.9 -3.5 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_18965 ddpB -0.9 -1.6 putative D,D-dipeptide transport system permease protein DdpB compare
NOLOHH_22090 ycaM -0.9 -1.7 Inner membrane transporter YcaM compare
NOLOHH_02690 dksA -0.9 -2.2 RNA polymerase-binding protein DksA compare
NOLOHH_24635 repL -0.9 -1.1 Positive regulator of RepFIC repA1 expression compare
NOLOHH_21000 ldtC -0.9 -1.9 L,D-transpeptidase LdtC compare
NOLOHH_18765 glsB -0.9 -1.2 glutaminase B compare
NOLOHH_11940 recD -0.9 -3.2 exodeoxyribonuclease V subunit alpha compare
NOLOHH_18145 manA -0.9 -1.7 mannose-6-phosphate isomerase compare
NOLOHH_17970 ydhF -0.9 -1.8 Oxidoreductase YdhF compare
NOLOHH_22830 -0.9 -4.0 packaged DNA stabilization protein p27 compare
NOLOHH_00605 essD -0.9 -1.6 phage lysis protein EssD compare
NOLOHH_24770 -0.9 -0.8 conjugal transfer protein TrbE compare
NOLOHH_11515 lysS -0.9 -1.5 lysine--tRNA ligase compare
NOLOHH_09905 nusA -0.9 -1.6 Transcription termination/antitermination protein NusA compare
NOLOHH_23050 -0.9 -2.7 Ead/Ea22-like protein compare
NOLOHH_23860 rnk -0.9 -1.3 nucleoside diphosphate kinase regulator compare
NOLOHH_11650 Gly_trna -0.9 -0.7 tRNA-Gly(ccc) compare
NOLOHH_17620 btuC -0.9 -1.7 vitamin B12 ABC transporter permease BtuC compare
NOLOHH_00360 -0.8 -4.7 relaxase/mobilization nuclease compare
NOLOHH_20675 dhaM -0.8 -1.5 dihydroxyacetone kinase phosphoryl donor subunit DhaM compare
NOLOHH_22810 -0.8 -4.8 DNA transfer protein compare
NOLOHH_22860 -0.8 -1.7 terminase small subunit compare
NOLOHH_16180 msrQ -0.8 -1.1 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
NOLOHH_16650 torY -0.8 -1.6 Cytochrome c-type protein TorY compare
NOLOHH_23020 -0.8 -3.1 hypothetical protein compare
NOLOHH_17705 ydiO -0.8 -1.1 acyl-CoA dehydrogenase compare
NOLOHH_20550 chaC -0.8 -1.2 glutathione-specific gamma-glutamylcyclotransferase compare
NOLOHH_01270 clpP -0.8 -1.6 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_16080 -0.8 -0.9 hypothetical protein compare
NOLOHH_17255 yeaD -0.8 -1.2 Putative glucose-6-phosphate 1-epimerase compare
NOLOHH_15455 gatZ -0.8 -1.2 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_20435 ychE -0.8 -2.6 NAAT family transporter YchE compare
NOLOHH_00090 -0.8 -1.7 hypothetical protein compare
NOLOHH_24115 -0.8 -0.7 hypothetical protein compare
NOLOHH_14980 lpxT -0.8 -1.9 Kdo(2)-lipid A phosphotransferase compare
NOLOHH_00660 -0.8 -2.3 protein ren compare
NOLOHH_13070 rseC -0.8 -2.0 SoxR-reducing system protein RseC compare
NOLOHH_22145 lrp -0.8 -3.6 leucine-responsive transcriptional regulator Lrp compare
NOLOHH_00575 -0.8 -1.4 DNA-packaging protein compare
NOLOHH_14495 nuoI -0.8 -1.6 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_12165 -0.8 -1.1 LemA family compare
NOLOHH_19460 paaG -0.8 -1.5 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG compare
NOLOHH_06115 -0.8 -1.4 transcriptional regulator compare
NOLOHH_22940 -0.8 -3.7 NinA compare
NOLOHH_00490 -0.8 -2.8 Tail tip assembly protein K compare
NOLOHH_14160 Arg_trna -0.8 -2.0 tRNA-Arg(cct) compare
NOLOHH_11410 ygfB -0.8 -3.7 UPF0149 family protein YgfB compare
NOLOHH_02710 yadN -0.8 -0.9 Uncharacterized fimbrial-like protein YadN compare
NOLOHH_06300 dsbA -0.8 -1.7 thiol:disulfide interchange protein DsbA compare
NOLOHH_20500 narI -0.8 -1.3 respiratory nitrate reductase subunit gamma compare
NOLOHH_19340 trg -0.8 -1.6 methyl-accepting chemotaxis protein Trg compare
NOLOHH_19515 ydbL -0.8 -1.4 Uncharacterized protein YdbL compare
NOLOHH_01935 rclC -0.8 -0.6 reactive chlorine species resistance protein RclC compare
NOLOHH_05200 yjbM -0.8 -1.9 Uncharacterized protein YjbM compare
NOLOHH_14500 nuoJ -0.8 -2.1 NADH-quinone oxidoreductase subunit J compare
NOLOHH_13865 crr -0.8 -0.8 PTS glucose transporter subunit IIA compare
NOLOHH_02670 mrcB -0.8 -6.5 bifunctional glycosyl transferase/transpeptidase compare
NOLOHH_06415 tatA -0.8 -1.7 Sec-independent protein translocase subunit TatA compare
NOLOHH_00560 -0.8 -0.9 phage portal protein compare
NOLOHH_23070 int -0.8 -3.9 Integrase compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms