Experiment set6S8 for Escherichia coli ECOR27

Compare to:

CPL00134L

200 most important genes:

  gene name fitness t score description  
NOLOHH_07555 rfaJ -4.7 -3.3 glucosyltransferase compare
NOLOHH_07545 waaO -4.2 -2.9 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_16505 ftnB -3.8 -1.6 non-heme ferritin-like protein compare
NOLOHH_06550 xerC -3.8 -2.6 tyrosine recombinase XerC compare
NOLOHH_07565 rfaL -3.7 -6.7 O-antigen ligase RfaL compare
NOLOHH_15730 -3.7 -8.6 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_17565 yniD -3.6 -1.6 Uncharacterized protein YniD compare
NOLOHH_18025 pdxY -3.5 -2.4 pyridoxal kinase PdxY compare
NOLOHH_07560 rfaB -3.5 -6.1 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_23480 pgm -3.4 -2.3 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_19040 adhP -3.2 -3.1 alcohol dehydrogenase AdhP compare
NOLOHH_11495 xerD -3.2 -4.1 site-specific tyrosine recombinase XerD compare
NOLOHH_23145 galE -3.2 -3.8 UDP-glucose 4-epimerase GalE compare
NOLOHH_07575 rfaF -3.2 -2.2 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_07535 rfaG -3.1 -3.7 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_06665 wzyE -3.1 -6.9 ECA oligosaccharide polymerase compare
NOLOHH_06675 wzxE -3.0 -5.3 lipid III flippase WzxE compare
NOLOHH_14340 ubiX -3.0 -2.0 flavin prenyltransferase UbiX compare
NOLOHH_20195 yciZ -3.0 -1.8 UPF0509 protein YciZ compare
NOLOHH_05815 metL -2.9 -11.8 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_23485 seqA -2.9 -2.9 replication initiation negative regulator SeqA compare
NOLOHH_17125 rnd -2.8 -1.9 ribonuclease D compare
NOLOHH_00525 -2.8 -1.7 Tail tube terminator protein compare
NOLOHH_09845 greA -2.8 -1.7 transcription elongation factor GreA compare
NOLOHH_18155 fumC -2.8 -1.7 class II fumarate hydratase compare
NOLOHH_23350 fimA -2.7 -1.6 type 1 fimbrial protein compare
NOLOHH_18070 rsxB -2.7 -1.8 electron transport complex subunit RsxB compare
NOLOHH_20460 galU -2.7 -1.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_05830 metJ -2.7 -2.5 met regulon transcriptional regulator MetJ compare
NOLOHH_23310 odhB -2.5 -1.7 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_06530 corA -2.4 -2.8 magnesium/cobalt transporter CorA compare
NOLOHH_24675 finO -2.3 -7.0 Fertility inhibition protein compare
NOLOHH_01935 rclC -2.3 -1.8 reactive chlorine species resistance protein RclC compare
NOLOHH_19485 paaB -2.2 -1.7 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_23315 sucA -2.2 -1.5 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_21450 pgaB -2.2 -1.9 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
NOLOHH_20670 dhaL -2.2 -2.0 dihydroxyacetone kinase subunit DhaL compare
NOLOHH_13100 pdxJ -2.2 -2.6 pyridoxine 5'-phosphate synthase compare
NOLOHH_06715 wecA -2.2 -12.0 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_23510 fur -2.1 -2.0 ferric iron uptake transcriptional regulator compare
NOLOHH_01270 clpP -2.1 -2.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_17170 insQ -2.1 -1.2 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_09835 obgE -2.0 -1.5 GTPase ObgE compare
NOLOHH_17115 fadD -2.0 -1.6 long-chain-fatty-acid--CoA ligase FadD compare
NOLOHH_18540 -2.0 -2.3 Tail tube protein compare
NOLOHH_15615 dcd -2.0 -2.9 dCTP deaminase compare
NOLOHH_00560 -2.0 -1.4 phage portal protein compare
NOLOHH_18135 uidC -1.9 -3.4 glucuronide uptake porin UidC compare
NOLOHH_21465 phoH -1.9 -3.6 phosphate starvation-inducible protein PhoH compare
NOLOHH_16305 fliN -1.9 -1.4 flagellar motor switch protein FliN compare
NOLOHH_20815 -1.9 -1.8 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_19095 narW -1.9 -2.1 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_11230 tkt -1.8 -2.1 transketolase compare
NOLOHH_04525 miaA -1.8 -1.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_11425 ubiI -1.8 -2.1 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_17675 ydiT -1.8 -1.7 Ferredoxin-like protein YdiT compare
NOLOHH_14630 nudI -1.8 -2.4 nucleoside triphosphatase NudI compare
NOLOHH_11690 -1.8 -1.3 flhB HrpN YscU SpaS family protein compare
NOLOHH_06395 rfaH -1.8 -5.7 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_08900 aroK -1.8 -1.4 shikimate kinase AroK compare
NOLOHH_17530 ybcI -1.7 -1.9 metal-dependent hydrolase compare
NOLOHH_18965 ddpB -1.7 -2.4 putative D,D-dipeptide transport system permease protein DdpB compare
NOLOHH_20710 nhaP2 -1.7 -2.5 potassium/proton antiporter compare
NOLOHH_15160 yohP -1.7 -1.2 protein YohP compare
NOLOHH_21090 pabC -1.6 -1.2 aminodeoxychorismate lyase compare
NOLOHH_13430 yfgG -1.6 -1.3 Uncharacterized protein YfgG compare
NOLOHH_18110 malI -1.6 -1.3 mal regulon transcriptional regulator MalI compare
NOLOHH_17430 astD -1.6 -3.1 succinylglutamate-semialdehyde dehydrogenase compare
NOLOHH_03445 -1.6 -2.2 thr operon leader peptide compare
NOLOHH_21210 flgA -1.6 -1.9 flagellar basal body P-ring formation protein FlgA compare
NOLOHH_06920 mnmG -1.6 -3.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_18305 ynfA -1.6 -1.1 YnfA family protein compare
NOLOHH_15485 yegS -1.6 -2.7 lipid kinase YegS compare
NOLOHH_00605 essD -1.6 -2.5 phage lysis protein EssD compare
NOLOHH_02690 dksA -1.5 -2.7 RNA polymerase-binding protein DksA compare
NOLOHH_14300 usg -1.5 -3.3 aspartate-semialdehyde dehydrogenase compare
NOLOHH_09730 ptsN -1.5 -2.2 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_22940 -1.5 -3.7 NinA compare
NOLOHH_11365 rpiA -1.5 -1.7 ribose-5-phosphate isomerase RpiA compare
NOLOHH_18955 ddpX -1.5 -1.5 D-alanyl-D-alanine dipeptidase compare
NOLOHH_16340 fliG -1.4 -2.5 flagellar motor switch protein FliG compare
NOLOHH_13865 crr -1.4 -1.0 PTS glucose transporter subunit IIA compare
NOLOHH_16585 cheR -1.4 -1.4 protein-glutamate O-methyltransferase CheR compare
NOLOHH_07540 rfaP -1.4 -4.2 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_20895 nudJ -1.4 -1.2 phosphatase NudJ compare
NOLOHH_17810 pykF -1.4 -2.0 pyruvate kinase PykF compare
NOLOHH_22905 ninH -1.4 -3.4 Protein ninH compare
NOLOHH_18900 ydeN -1.4 -0.8 Uncharacterized sulfatase YdeN compare
NOLOHH_24235 -1.4 -0.9 conjugal transfer protein TraM compare
NOLOHH_20915 phoP -1.4 -1.8 two-component system response regulator PhoP compare
NOLOHH_21335 mdoC -1.4 -2.4 glucans biosynthesis protein MdoC compare
NOLOHH_09455 -1.4 -1.2 DUF2556 domain-containing protein compare
NOLOHH_20185 rnb -1.4 -2.0 exoribonuclease II compare
NOLOHH_19880 ynaL -1.4 -1.7 Protein YnaL compare
NOLOHH_00385 -1.4 -1.6 hypothetical protein compare
NOLOHH_21510 rutR -1.4 -3.1 HTH-type transcriptional regulator RutR compare
NOLOHH_00620 -1.4 -1.0 Orf33, orf151, orf56, orf96, rus, orf45, orf8, orf127, and nmpC genes compare
NOLOHH_21055 hinT -1.4 -1.3 purine nucleoside phosphoramidase compare
NOLOHH_13185 glyA -1.4 -3.2 serine hydroxymethyltransferase compare
NOLOHH_17030 mntP -1.3 -1.8 manganese efflux pump MntP compare
NOLOHH_15000 yeiW -1.3 -1.4 UPF0153 protein YeiW compare
NOLOHH_22825 -1.3 -6.0 Packaged DNA stabilization protein gp10 compare
NOLOHH_15670 wcaF -1.3 -2.2 colanic acid biosynthesis acetyltransferase WcaF compare
NOLOHH_15505 parE -1.3 -1.3 type II toxin-antitoxin system RelE/ParE family toxin compare
NOLOHH_00565 -1.3 -1.4 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_15220 yohO -1.3 -0.9 protein YohO compare
NOLOHH_12165 -1.3 -1.0 LemA family compare
NOLOHH_22860 -1.3 -3.1 terminase small subunit compare
NOLOHH_06415 tatA -1.3 -2.1 Sec-independent protein translocase subunit TatA compare
NOLOHH_05965 pfkA -1.3 -4.0 6-phosphofructokinase compare
NOLOHH_20775 ycgN -1.3 -1.4 YcgN family cysteine cluster protein compare
NOLOHH_22840 -1.3 -7.7 head protein compare
NOLOHH_18065 rsxC -1.3 -3.3 electron transport complex subunit RsxC compare
NOLOHH_18825 lsrR -1.3 -2.4 transcriptional regulator LsrR compare
NOLOHH_09810 sfsB -1.3 -1.2 DNA-binding transcriptional regulator SfsB compare
NOLOHH_06540 uvrD -1.3 -7.6 DNA helicase II compare
NOLOHH_16855 kdgA -1.3 -1.2 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_24300 -1.3 -2.1 Uncharacterized protein YubJ compare
NOLOHH_22050 serC -1.2 -5.0 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_22145 lrp -1.2 -4.4 leucine-responsive transcriptional regulator Lrp compare
NOLOHH_05225 dgkA -1.2 -1.7 diacylglycerol kinase compare
NOLOHH_18125 uidA -1.2 -2.5 beta-glucuronidase compare
NOLOHH_18115 hdhA -1.2 -1.4 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_16635 yecM -1.2 -1.7 VOC family protein compare
NOLOHH_17835 -1.2 -1.0 Ferredoxin compare
NOLOHH_08495 yhhL -1.2 -1.2 DUF1145 domain-containing protein compare
NOLOHH_08775 -1.2 -3.5 NfuA family Fe-S biogenesis protein compare
NOLOHH_17250 yeaE -1.2 -1.7 methylglyoxal reductase YeaE compare
NOLOHH_18350 -1.2 -0.7 Putative prophage protein compare
NOLOHH_13070 rseC -1.2 -2.4 SoxR-reducing system protein RseC compare
NOLOHH_03340 -1.2 -1.1 fimbrial family protein compare
NOLOHH_23240 tolB -1.2 -3.7 Tol-Pal system protein TolB compare
NOLOHH_19785 -1.2 -1.7 DUF977 domain-containing protein compare
NOLOHH_03190 apaH -1.1 -3.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_18130 uidB -1.1 -1.6 glucuronide transporter compare
NOLOHH_16500 yecJ -1.1 -1.4 Uncharacterized protein YecJ compare
NOLOHH_22885 Thr_trna -1.1 -1.5 tRNA-Thr(tgt) compare
NOLOHH_15685 gmm -1.1 -2.0 GDP-mannose mannosyl hydrolase compare
NOLOHH_14505 nuoK -1.1 -1.7 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_17275 ydjL -1.1 -1.1 Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL compare
NOLOHH_18385 tnp-ISNCY -1.1 -2.0 ISNCY family transposase compare
NOLOHH_22845 -1.1 -3.8 phage capsid protein compare
NOLOHH_21910 ssuB -1.1 -2.4 aliphatic sulfonates ABC transporter ATP-binding protein compare
NOLOHH_15455 gatZ -1.1 -1.5 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_18730 marC -1.1 -1.3 NAAT family transporter MarC compare
NOLOHH_14490 nuoH -1.1 -3.0 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_24530 -1.0 -2.0 HTH-21 domain-containing protein compare
NOLOHH_22850 -1.0 -5.3 portal protein compare
NOLOHH_20250 ymiC -1.0 -1.1 Protein YmiC compare
NOLOHH_14465 nuoB -1.0 -3.9 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_07945 hokA -1.0 -1.5 type I toxin-antitoxin system toxin HokA compare
NOLOHH_08375 pitA -1.0 -3.4 inorganic phosphate transporter PitA compare
NOLOHH_09875 secG -1.0 -1.2 preprotein translocase subunit SecG compare
NOLOHH_21675 cbdX -1.0 -0.8 cytochrome bd-II oxidase subunit CbdX compare
NOLOHH_17015 yebO -1.0 -1.4 Uncharacterized protein YebO compare
NOLOHH_24215 traA -1.0 -1.5 type IV conjugative transfer system pilin TraA compare
NOLOHH_20405 oppD -1.0 -1.4 murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD compare
NOLOHH_17135 yeaW -1.0 -2.0 carnitine monooxygenase subunit YeaW compare
NOLOHH_14470 nuoC -1.0 -3.4 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_24475 -1.0 -0.8 pilus assembly protein compare
NOLOHH_23235 pal -1.0 -2.4 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_24470 -1.0 -1.2 prepilin-type cleavage/methylation domain-containing protein compare
NOLOHH_22835 -1.0 -2.1 hypothetical protein compare
NOLOHH_23245 tolA -1.0 -2.5 cell envelope integrity protein TolA compare
NOLOHH_16845 zwf -1.0 -1.1 glucose-6-phosphate dehydrogenase compare
NOLOHH_20440 ychT -1.0 -1.0 Protein YchT compare
NOLOHH_03030 cra -1.0 -3.5 catabolite repressor/activator compare
NOLOHH_24795 trbI -1.0 -1.1 type-F conjugative transfer system protein TrbI compare
NOLOHH_19255 ydcR -1.0 -1.9 Uncharacterized HTH-type transcriptional regulator YdcR compare
NOLOHH_22090 ycaM -1.0 -2.3 Inner membrane transporter YcaM compare
NOLOHH_17620 btuC -0.9 -1.4 vitamin B12 ABC transporter permease BtuC compare
NOLOHH_09760 kdsC -0.9 -2.5 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
NOLOHH_17270 yeaC -0.9 -1.1 Uncharacterized protein YeaC compare
NOLOHH_22920 -0.9 -1.2 protein ninF compare
NOLOHH_22830 -0.9 -4.7 packaged DNA stabilization protein p27 compare
NOLOHH_23045 -0.9 -2.1 hypothetical protein compare
NOLOHH_15885 yeeD -0.9 -1.8 Putative sulfur carrier protein YeeD compare
NOLOHH_00360 -0.9 -5.6 relaxase/mobilization nuclease compare
NOLOHH_18610 pinR -0.9 -1.2 Serine recombinase PinR compare
NOLOHH_12925 rluD -0.9 -4.0 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
NOLOHH_09905 nusA -0.9 -1.7 Transcription termination/antitermination protein NusA compare
NOLOHH_02630 yadW -0.9 -1.0 Protein YadW compare
NOLOHH_16100 -0.9 -1.9 integrase compare
NOLOHH_00515 -0.9 -2.2 Phage minor tail protein G compare
NOLOHH_11415 pepP -0.9 -2.6 Xaa-Pro aminopeptidase compare
NOLOHH_21315 yceK -0.9 -1.4 YceK/YidQ family lipoprotein compare
NOLOHH_22855 -0.9 -3.8 PBSX family phage terminase large subunit compare
NOLOHH_13075 lepA -0.9 -2.3 translation elongation factor 4 compare
NOLOHH_04350 tnpA -0.9 -1.7 IS200/IS605-like element IS609 family transposase compare
NOLOHH_19045 yddM -0.9 -1.2 HigA family addiction module antitoxin compare
NOLOHH_19900 dgcM -0.9 -2.2 diguanylate cyclase DgcM compare
NOLOHH_16195 hprR -0.9 -1.4 response regulator transcription factor HprR compare
NOLOHH_00625 ylcG -0.9 -2.3 Uncharacterized protein YlcG compare
NOLOHH_05845 -0.9 -2.7 Iso-IS1 InsB protein, transposase compare
NOLOHH_23105 pgl -0.9 -3.5 6-phosphogluconolactonase compare
NOLOHH_18100 malY -0.9 -1.7 bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY compare
NOLOHH_23345 gltA -0.9 -3.6 citrate synthase compare
NOLOHH_22935 ninB -0.9 -3.2 Protein ninB compare
NOLOHH_07870 baxL -0.9 -1.2 Putative translational regulatory protein BaxL compare
NOLOHH_01585 -0.9 -2.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms