Experiment set6S68 for Escherichia coli ECOR27

Compare to:

CPL00152

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -6.1 -9.3 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_15730 -5.4 -5.3 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07560 rfaB -5.2 -5.1 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_06665 wzyE -5.1 -6.1 ECA oligosaccharide polymerase compare
NOLOHH_07565 rfaL -4.8 -5.7 O-antigen ligase RfaL compare
NOLOHH_06675 wzxE -4.7 -3.2 lipid III flippase WzxE compare
NOLOHH_07545 waaO -4.4 -3.0 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_23145 galE -3.9 -2.7 UDP-glucose 4-epimerase GalE compare
NOLOHH_11495 xerD -3.7 -4.4 site-specific tyrosine recombinase XerD compare
NOLOHH_07555 rfaJ -3.6 -3.4 glucosyltransferase compare
NOLOHH_07575 rfaF -3.4 -2.3 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_24675 finO -3.1 -9.4 Fertility inhibition protein compare
NOLOHH_07535 rfaG -3.0 -5.3 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_20460 galU -2.9 -2.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_06530 corA -2.9 -2.8 magnesium/cobalt transporter CorA compare
NOLOHH_05815 metL -2.9 -11.1 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_12545 recA -2.8 -3.3 recombinase RecA compare
NOLOHH_05225 dgkA -2.5 -4.0 diacylglycerol kinase compare
NOLOHH_11425 ubiI -2.4 -2.3 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_13865 crr -2.3 -1.6 PTS glucose transporter subunit IIA compare
NOLOHH_20735 fadR -2.3 -1.5 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_07125 -2.3 -3.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_22435 dgcI -2.3 -2.6 putative diguanylate cyclase DgcI compare
NOLOHH_23030 -2.2 -3.2 siphovirus Gp157 family protein compare
NOLOHH_23485 seqA -2.2 -2.9 replication initiation negative regulator SeqA compare
NOLOHH_12805 rnfH -2.1 -2.6 RnfH family protein compare
NOLOHH_14340 ubiX -2.1 -2.4 flavin prenyltransferase UbiX compare
NOLOHH_23250 tolR -2.1 -2.8 colicin uptake protein TolR compare
NOLOHH_02845 aceE -2.0 -1.4 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_00940 -2.0 -1.7 RHS repeat protein compare
NOLOHH_06395 rfaH -2.0 -6.0 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_24680 traX -1.9 -3.8 conjugal transfer pilus acetylase TraX compare
NOLOHH_24240 -1.9 -1.6 transglycosylase SLT domain-containing protein compare
NOLOHH_22820 -1.8 -6.6 Phage-tail-NK domain-containing protein compare
NOLOHH_23480 pgm -1.8 -2.8 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_21130 yceD -1.8 -2.4 23S rRNA accumulation protein YceD compare
NOLOHH_14200 sixA -1.8 -2.0 phosphohistidine phosphatase SixA compare
NOLOHH_01380 pgpA -1.8 -1.6 phosphatidylglycerophosphatase A compare
NOLOHH_23245 tolA -1.8 -4.5 cell envelope integrity protein TolA compare
NOLOHH_17270 yeaC -1.7 -2.6 Uncharacterized protein YeaC compare
NOLOHH_21560 yccJ -1.7 -2.4 Uncharacterized protein YccJ compare
NOLOHH_02285 hcp1,tssD1 -1.7 -1.7 type VI secretion system protein, Hcp family compare
NOLOHH_11775 yqeJ -1.7 -1.4 Uncharacterized protein YqeJ compare
NOLOHH_20750 umuC -1.7 -2.5 DNA polymerase V catalytic protein compare
NOLOHH_09835 obgE -1.7 -1.6 GTPase ObgE compare
NOLOHH_00445 -1.7 -3.0 peptidyl-arginine deiminase compare
NOLOHH_18050 rsxE -1.6 -2.1 electron transport complex subunit RsxE compare
NOLOHH_14510 nuoL -1.6 -5.1 NADH-quinone oxidoreductase subunit L compare
NOLOHH_17810 pykF -1.6 -2.8 pyruvate kinase PykF compare
NOLOHH_23235 pal -1.6 -2.7 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_05965 pfkA -1.6 -4.9 6-phosphofructokinase compare
NOLOHH_02825 acnB -1.6 -2.3 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_18620 ydfJ -1.6 -1.4 Putative transporter YdfJ compare
NOLOHH_03170 surA -1.6 -3.9 peptidylprolyl isomerase SurA compare
NOLOHH_11365 rpiA -1.5 -1.8 ribose-5-phosphate isomerase RpiA compare
NOLOHH_17785 sufD -1.5 -1.7 Fe-S cluster assembly protein SufD compare
NOLOHH_22905 ninH -1.5 -3.8 Protein ninH compare
NOLOHH_15110 mglA -1.5 -2.0 galactose/methyl galactoside ABC transporter ATP-binding protein MglA compare
NOLOHH_19710 -1.5 -2.2 transcriptional regulator compare
NOLOHH_19475 paaD -1.5 -2.8 phenylacetate degradation protein PaaD compare
NOLOHH_14470 nuoC -1.5 -4.5 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_23510 fur -1.5 -2.0 ferric iron uptake transcriptional regulator compare
NOLOHH_07710 yibG -1.5 -1.3 Uncharacterized protein YibG compare
NOLOHH_13990 ypeD -1.5 -1.9 Protein YpeD compare
NOLOHH_02185 ydcD -1.5 -1.3 Uncharacterized protein YdcD compare
NOLOHH_20465 rssB -1.5 -2.8 two-component system response regulator RssB compare
NOLOHH_24820 -1.5 -1.2 Conjugal transfer protein TrbD compare
NOLOHH_08375 pitA -1.5 -4.6 inorganic phosphate transporter PitA compare
NOLOHH_03190 apaH -1.5 -4.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_19045 yddM -1.5 -1.6 HigA family addiction module antitoxin compare
NOLOHH_23055 -1.5 -4.4 DUF550 domain-containing protein compare
NOLOHH_22825 -1.5 -7.3 Packaged DNA stabilization protein gp10 compare
NOLOHH_23315 sucA -1.5 -1.3 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_22880 -1.4 -7.8 phage holin, lambda family compare
NOLOHH_18805 lsrB -1.4 -2.9 autoinducer 2 ABC transporter substrate-binding protein LsrB compare
NOLOHH_01270 clpP -1.4 -2.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_18955 ddpX -1.4 -1.5 D-alanyl-D-alanine dipeptidase compare
NOLOHH_00615 quuD -1.4 -1.2 antitermination protein QuuD compare
NOLOHH_01960 ykgR -1.4 -1.2 Uncharacterized membrane protein YkgR compare
NOLOHH_19520 -1.4 -1.5 YnbE family lipoprotein compare
NOLOHH_06540 uvrD -1.4 -8.9 DNA helicase II compare
NOLOHH_13075 lepA -1.4 -3.0 translation elongation factor 4 compare
NOLOHH_16870 yebF -1.4 -2.2 Protein YebF compare
NOLOHH_18900 ydeN -1.4 -2.0 Uncharacterized sulfatase YdeN compare
NOLOHH_02710 yadN -1.3 -1.3 Uncharacterized fimbrial-like protein YadN compare
NOLOHH_18070 rsxB -1.3 -1.1 electron transport complex subunit RsxB compare
NOLOHH_06920 mnmG -1.3 -3.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_22050 serC -1.3 -5.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_22850 -1.3 -7.8 portal protein compare
NOLOHH_20635 dauA -1.3 -2.4 C4-dicarboxylic acid transporter DauA compare
NOLOHH_04525 miaA -1.3 -1.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_24270 psiA -1.3 -2.0 Protein PsiA compare
NOLOHH_19740 tolA -1.3 -1.8 cell envelope integrity protein TolA compare
NOLOHH_22445 gsiD -1.3 -1.9 glutathione ABC transporter permease GsiD compare
NOLOHH_14480 nuoF -1.3 -4.6 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_22910 ninG -1.3 -2.8 Protein ninG compare
NOLOHH_13310 hscA -1.3 -1.7 Fe-S protein assembly chaperone HscA compare
NOLOHH_07540 rfaP -1.3 -4.1 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_17840 ydhU -1.3 -1.7 Putative cytochrome YdhU compare
NOLOHH_03030 cra -1.3 -4.6 catabolite repressor/activator compare
NOLOHH_17415 xthA -1.3 -1.4 exodeoxyribonuclease III compare
NOLOHH_18110 malI -1.2 -1.8 mal regulon transcriptional regulator MalI compare
NOLOHH_13720 eutN -1.2 -1.4 ethanolamine utilization microcompartment protein EutN compare
NOLOHH_20745 dsbB -1.2 -2.8 disulfide bond formation protein DsbB compare
NOLOHH_00565 -1.2 -1.7 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_20195 yciZ -1.2 -1.1 UPF0509 protein YciZ compare
NOLOHH_22830 -1.2 -5.8 packaged DNA stabilization protein p27 compare
NOLOHH_17755 menI -1.2 -1.4 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
NOLOHH_24500 -1.2 -1.7 pilus assembly protein compare
NOLOHH_04690 fxsA -1.2 -3.6 membrane protein FxsA compare
NOLOHH_00545 -1.2 -1.8 Major capsid protein compare
NOLOHH_20030 pgmB -1.2 -2.1 beta-phosphoglucomutase compare
NOLOHH_22845 -1.2 -4.1 phage capsid protein compare
NOLOHH_00705 gam -1.2 -2.3 Host-nuclease inhibitor protein gam compare
NOLOHH_09730 ptsN -1.2 -2.0 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_09875 secG -1.2 -1.6 preprotein translocase subunit SecG compare
NOLOHH_14595 arnT -1.2 -1.7 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
NOLOHH_10165 -1.1 -2.4 YhaC family protein compare
NOLOHH_15345 rcnA -1.1 -2.9 nickel/cobalt efflux protein RcnA compare
NOLOHH_23035 -1.1 -2.9 DUF5405 domain-containing protein compare
NOLOHH_22890 Asn_trna -1.1 -2.5 tRNA-Asn(gtt) compare
NOLOHH_04165 treC -1.1 -3.5 alpha,alpha-phosphotrehalase compare
NOLOHH_22840 -1.1 -7.2 head protein compare
NOLOHH_01255 lon_P403L -1.1 -4.8 Lon protease compare
NOLOHH_21490 efeU -1.1 -1.6 Ferrous iron permease EfeU compare
NOLOHH_16190 hiuH -1.1 -2.0 hydroxyisourate hydrolase compare
NOLOHH_17950 -1.1 -1.6 Lactoylglutathione lyase compare
NOLOHH_22810 -1.1 -7.1 DNA transfer protein compare
NOLOHH_14420 yfbV -1.1 -1.5 UPF0208 membrane protein YfbV compare
NOLOHH_18240 ynfL -1.1 -1.4 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_14455 -1.1 -1.3 hypothetical protein compare
NOLOHH_22815 -1.1 -4.8 DUF2824 domain-containing protein compare
NOLOHH_02690 dksA -1.1 -2.4 RNA polymerase-binding protein DksA compare
NOLOHH_13035 srmB -1.1 -4.7 ATP-dependent RNA helicase SrmB compare
NOLOHH_18115 hdhA -1.1 -1.4 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_22855 -1.1 -4.0 PBSX family phage terminase large subunit compare
NOLOHH_23240 tolB -1.1 -3.6 Tol-Pal system protein TolB compare
NOLOHH_11110 rdgB -1.1 -2.5 XTP/dITP diphosphatase compare
NOLOHH_18330 dnaQ -1.1 -3.2 exonuclease compare
NOLOHH_00730 -1.1 -2.1 DUF1382 domain-containing protein compare
NOLOHH_18960 ddpA -1.0 -1.5 putative D,D-dipeptide-binding periplasmic protein DdpA compare
NOLOHH_23105 pgl -1.0 -3.7 6-phosphogluconolactonase compare
NOLOHH_24530 -1.0 -2.3 HTH-21 domain-containing protein compare
NOLOHH_23070 int -1.0 -5.0 Integrase compare
NOLOHH_15130 yeiS -1.0 -1.7 Uncharacterized protein YeiS compare
NOLOHH_20815 -1.0 -1.5 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_12610 luxS -1.0 -3.2 S-ribosylhomocysteine lyase compare
NOLOHH_20670 dhaL -1.0 -1.3 dihydroxyacetone kinase subunit DhaL compare
NOLOHH_13900 ypeB -1.0 -1.2 Uncharacterized protein YpeB compare
NOLOHH_24795 trbI -1.0 -1.1 type-F conjugative transfer system protein TrbI compare
NOLOHH_00385 -1.0 -2.3 hypothetical protein compare
NOLOHH_17010 yobH -1.0 -1.7 Uncharacterized protein YobH compare
NOLOHH_23065 -1.0 -1.2 hypothetical protein compare
NOLOHH_06730 trxA -1.0 -2.0 thioredoxin TrxA compare
NOLOHH_09760 kdsC -1.0 -2.8 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
NOLOHH_12925 rluD -1.0 -4.5 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
NOLOHH_23000 ea10 -1.0 -1.9 Protein ea10 compare
NOLOHH_22885 Thr_trna -1.0 -3.0 tRNA-Thr(tgt) compare
NOLOHH_19760 -1.0 -1.7 DUF1367 domain-containing protein compare
NOLOHH_16845 zwf -1.0 -0.9 glucose-6-phosphate dehydrogenase compare
NOLOHH_08145 bcsZ -1.0 -5.6 cellulose synthase complex periplasmic endoglucanase BcsZ compare
NOLOHH_00605 essD -1.0 -1.3 phage lysis protein EssD compare
NOLOHH_18350 -1.0 -0.8 Putative prophage protein compare
NOLOHH_23310 odhB -1.0 -1.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_00660 -1.0 -2.6 protein ren compare
NOLOHH_14465 nuoB -1.0 -3.6 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_11120 yggT -1.0 -1.0 osmotic shock tolerance protein YggT compare
NOLOHH_20905 hflD -1.0 -1.4 high frequency lysogenization protein HflD compare
NOLOHH_23020 -1.0 -3.5 hypothetical protein compare
NOLOHH_14305 truA -1.0 -2.7 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_07015 pstC -1.0 -1.7 phosphate ABC transporter permease PstC compare
NOLOHH_15920 eutP -1.0 -1.3 propanediol utilization protein compare
NOLOHH_16490 yecR -0.9 -1.2 Uncharacterized protein YecR compare
NOLOHH_08720 glpD -0.9 -3.9 glycerol-3-phosphate dehydrogenase compare
NOLOHH_17395 ynjA -0.9 -1.0 Uncharacterized protein YnjA compare
NOLOHH_24815 trbG -0.9 -0.9 conjugal transfer protein TrbG compare
NOLOHH_24345 -0.9 -1.1 colicin transporter compare
NOLOHH_16340 fliG -0.9 -1.3 flagellar motor switch protein FliG compare
NOLOHH_21015 ycfJ -0.9 -1.1 Uncharacterized protein YcfJ compare
NOLOHH_22870 -0.9 -3.8 lysis protein compare
NOLOHH_15015 fruB -0.9 -3.2 fused PTS fructose transporter subunit IIA/HPr protein compare
NOLOHH_06110 -0.9 -1.1 hypothetical protein compare
NOLOHH_09610 zapG -0.9 -3.2 Z-ring associated protein ZapG compare
NOLOHH_22940 -0.9 -2.5 NinA compare
NOLOHH_21120 plsX -0.9 -2.9 phosphate acyltransferase PlsX compare
NOLOHH_22800 -0.9 -5.3 DNA transfer protein compare
NOLOHH_23790 crcB -0.9 -1.9 fluoride efflux transporter CrcB compare
NOLOHH_02180 yncI -0.9 -0.9 ISAs1 family transposase compare
NOLOHH_23050 -0.9 -3.4 Ead/Ea22-like protein compare
NOLOHH_22865 -0.9 -4.8 ORF11CD3 domain-containing protein compare
NOLOHH_22860 -0.9 -2.4 terminase small subunit compare
NOLOHH_19500 tynA -0.9 -1.1 primary-amine oxidase compare
NOLOHH_16355 yedK -0.9 -1.3 Abasic site processing protein YedK compare
NOLOHH_12630 ygaH -0.9 -1.7 L-valine transporter subunit YgaH compare
NOLOHH_17055 -0.9 -1.0 Cytoplasmic protein compare
NOLOHH_09955 deaD -0.9 -1.9 ATP-dependent RNA helicase DeaD compare
NOLOHH_15655 wcaC -0.9 -2.1 colanic acid biosynthesis glycosyltransferase WcaC compare
NOLOHH_15525 baeS -0.9 -3.2 two-component system sensor histidine kinase BaeS compare
NOLOHH_12770 -0.9 -1.4 ATP-binding protein compare
NOLOHH_14270 yfcL -0.9 -2.5 Uncharacterized protein YfcL conserved


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms