Experiment set6S63 for Escherichia coli ECOR27

Compare to:

Bas97

200 most important genes:

  gene name fitness t score description  
NOLOHH_04525 miaA -4.0 -2.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_23510 fur -3.6 -2.5 ferric iron uptake transcriptional regulator compare
NOLOHH_11495 xerD -3.3 -4.5 site-specific tyrosine recombinase XerD compare
NOLOHH_12545 recA -3.2 -3.7 recombinase RecA compare
NOLOHH_05815 metL -2.8 -10.9 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_06550 xerC -2.8 -3.8 tyrosine recombinase XerC compare
NOLOHH_06665 wzyE -2.6 -6.3 ECA oligosaccharide polymerase compare
NOLOHH_17115 fadD -2.5 -2.3 long-chain-fatty-acid--CoA ligase FadD compare
NOLOHH_00525 -2.4 -1.9 Tail tube terminator protein compare
NOLOHH_18715 marB -2.3 -2.6 multiple antibiotic resistance protein MarB compare
NOLOHH_00385 -2.3 -3.5 hypothetical protein compare
NOLOHH_06530 corA -2.3 -3.7 magnesium/cobalt transporter CorA compare
NOLOHH_14810 yojO -2.2 -2.0 Uncharacterized protein YojO compare
NOLOHH_07575 rfaF -2.2 -2.9 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_20745 dsbB -2.2 -4.2 disulfide bond formation protein DsbB compare
NOLOHH_07545 waaO -2.1 -3.2 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_09695 arcB -2.1 -5.4 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_02845 aceE -2.1 -1.4 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_14340 ubiX -2.1 -2.7 flavin prenyltransferase UbiX compare
NOLOHH_13055 rseA -2.1 -2.4 anti-sigma-E factor RseA compare
NOLOHH_14475 nuoE -2.0 -2.0 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_20815 -2.0 -2.9 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_19045 yddM -2.0 -1.6 HigA family addiction module antitoxin compare
NOLOHH_24675 finO -2.0 -8.0 Fertility inhibition protein compare
NOLOHH_21380 cgsE -1.9 -1.2 curli production assembly/transport protein CsgE compare
NOLOHH_23245 tolA -1.9 -4.9 cell envelope integrity protein TolA compare
NOLOHH_11230 tkt -1.9 -2.5 transketolase compare
NOLOHH_18900 ydeN -1.9 -2.4 Uncharacterized sulfatase YdeN compare
NOLOHH_03340 -1.9 -1.7 fimbrial family protein compare
NOLOHH_23035 -1.9 -1.9 DUF5405 domain-containing protein compare
NOLOHH_14460 nuoA -1.8 -3.0 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_24695 vapB -1.8 -2.1 toxin-antitoxin system antitoxin VapB compare
NOLOHH_15455 gatZ -1.8 -3.2 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_24795 trbI -1.8 -1.2 type-F conjugative transfer system protein TrbI compare
NOLOHH_17330 ydjA -1.8 -1.4 NAD(P)H nitroreductase compare
NOLOHH_23480 pgm -1.8 -2.8 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_14505 nuoK -1.7 -2.5 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_13865 crr -1.7 -1.3 PTS glucose transporter subunit IIA compare
NOLOHH_05490 hupA -1.7 -2.1 DNA-binding protein HU-alpha compare
NOLOHH_00940 -1.7 -1.5 RHS repeat protein compare
NOLOHH_20775 ycgN -1.7 -2.0 YcgN family cysteine cluster protein compare
NOLOHH_17170 insQ -1.7 -1.3 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_00535 fII -1.7 -2.0 Head-tail connector protein FII compare
NOLOHH_13075 lepA -1.7 -3.5 translation elongation factor 4 compare
NOLOHH_18885 ydeP -1.7 -2.4 acid resistance putative oxidoreductase YdeP compare
NOLOHH_21050 -1.7 -1.3 DUF1425 domain-containing protein compare
NOLOHH_19420 ydbD -1.7 -2.4 Uncharacterized protein YdbD compare
NOLOHH_11365 rpiA -1.7 -1.9 ribose-5-phosphate isomerase RpiA compare
NOLOHH_03170 surA -1.7 -3.5 peptidylprolyl isomerase SurA compare
NOLOHH_19515 ydbL -1.6 -3.1 Uncharacterized protein YdbL compare
NOLOHH_20460 galU -1.6 -2.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_20250 ymiC -1.6 -1.9 Protein YmiC compare
NOLOHH_00445 -1.6 -3.0 peptidyl-arginine deiminase compare
NOLOHH_22905 ninH -1.6 -4.2 Protein ninH compare
NOLOHH_13630 ypfN -1.5 -1.5 UPF0370 protein YpfN compare
NOLOHH_22835 -1.5 -3.6 hypothetical protein compare
NOLOHH_06920 mnmG -1.5 -3.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_19845 recT -1.5 -2.0 recombination protein RecT compare
NOLOHH_18800 lsrF -1.5 -1.7 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
NOLOHH_22050 serC -1.5 -5.4 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_19880 ynaL -1.5 -1.3 Protein YnaL compare
NOLOHH_02825 acnB -1.5 -2.3 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_05965 pfkA -1.5 -5.0 6-phosphofructokinase compare
NOLOHH_11425 ubiI -1.5 -2.1 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_07125 -1.5 -2.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_14250 aroC -1.4 -3.1 chorismate synthase compare
NOLOHH_03360 nhaA -1.4 -2.7 Na+/H+ antiporter NhaA compare
NOLOHH_00790 fimA -1.4 -1.4 type 1 fimbrial major subunit FimA compare
NOLOHH_03190 apaH -1.4 -4.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_00720 -1.4 -4.2 cruciferin compare
NOLOHH_20440 ychT -1.3 -1.4 Protein YchT compare
NOLOHH_11585 mocA -1.3 -2.5 molybdenum cofactor cytidylyltransferase compare
NOLOHH_22850 -1.3 -7.4 portal protein compare
NOLOHH_13035 srmB -1.3 -5.0 ATP-dependent RNA helicase SrmB compare
NOLOHH_14500 nuoJ -1.3 -3.3 NADH-quinone oxidoreductase subunit J compare
NOLOHH_01255 lon_P403L -1.3 -5.2 Lon protease compare
NOLOHH_20425 -1.3 -1.7 hypothetical protein compare
NOLOHH_14510 nuoL -1.3 -4.7 NADH-quinone oxidoreductase subunit L compare
NOLOHH_19250 ydcS -1.3 -1.2 Bifunctional polyhydroxybutyrate synthase / ABC transporter periplasmic binding protein compare
NOLOHH_19095 narW -1.3 -1.8 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_20735 fadR -1.3 -1.4 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_09610 zapG -1.2 -4.3 Z-ring associated protein ZapG compare
NOLOHH_02180 yncI -1.2 -1.2 ISAs1 family transposase compare
NOLOHH_06540 uvrD -1.2 -7.9 DNA helicase II compare
NOLOHH_19040 adhP -1.2 -1.5 alcohol dehydrogenase AdhP compare
NOLOHH_13070 rseC -1.2 -2.5 SoxR-reducing system protein RseC compare
NOLOHH_14420 yfbV -1.2 -1.9 UPF0208 membrane protein YfbV compare
NOLOHH_00545 -1.2 -2.5 Major capsid protein compare
NOLOHH_17565 yniD -1.2 -1.0 Uncharacterized protein YniD compare
NOLOHH_24460 -1.2 -1.6 LngX2 compare
NOLOHH_06675 wzxE -1.2 -3.3 lipid III flippase WzxE compare
NOLOHH_24530 -1.2 -1.5 HTH-21 domain-containing protein compare
NOLOHH_01270 clpP -1.2 -1.9 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_13355 ndk -1.2 -2.0 nucleoside-diphosphate kinase compare
NOLOHH_22840 -1.1 -7.3 head protein compare
NOLOHH_22855 -1.1 -3.8 PBSX family phage terminase large subunit compare
NOLOHH_19165 vgrG,tssI -1.1 -2.5 type VI secretion system effector VgrG compare
NOLOHH_22845 -1.1 -4.7 phage capsid protein compare
NOLOHH_22825 -1.1 -5.8 Packaged DNA stabilization protein gp10 compare
NOLOHH_04760 ghoS -1.1 -2.7 type V toxin-antitoxin system endoribonuclease antitoxin GhoS compare
NOLOHH_23055 -1.1 -3.7 DUF550 domain-containing protein compare
NOLOHH_18110 malI -1.1 -1.8 mal regulon transcriptional regulator MalI compare
NOLOHH_17270 yeaC -1.1 -1.7 Uncharacterized protein YeaC compare
NOLOHH_13100 pdxJ -1.1 -2.5 pyridoxine 5'-phosphate synthase compare
NOLOHH_20455 hns -1.1 -2.7 DNA-binding transcriptional regulator H-NS compare
NOLOHH_22950 -1.1 -4.4 Replication protein P compare
NOLOHH_14515 nuoM -1.1 -3.6 NADH-quinone oxidoreductase subunit M compare
NOLOHH_22815 -1.1 -4.1 DUF2824 domain-containing protein compare
NOLOHH_24335 -1.0 -1.7 YdeA protein compare
NOLOHH_08145 bcsZ -1.0 -6.3 cellulose synthase complex periplasmic endoglucanase BcsZ compare
NOLOHH_05695 sthA -1.0 -4.4 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_04765 yjdJ -1.0 -2.2 Uncharacterized protein YjdJ compare
NOLOHH_22820 -1.0 -4.5 Phage-tail-NK domain-containing protein compare
NOLOHH_00740 dksA -1.0 -2.1 conjugal transfer protein TraR compare
NOLOHH_01085 recR -1.0 -4.0 recombination mediator RecR compare
NOLOHH_22435 dgcI -1.0 -1.7 putative diguanylate cyclase DgcI compare
NOLOHH_23065 -1.0 -2.0 hypothetical protein compare
NOLOHH_03030 cra -1.0 -3.6 catabolite repressor/activator compare
NOLOHH_08775 -1.0 -2.6 NfuA family Fe-S biogenesis protein compare
NOLOHH_22940 -1.0 -3.6 NinA compare
NOLOHH_22930 -1.0 -4.7 phage N-6-adenine-methyltransferase compare
NOLOHH_06300 dsbA -1.0 -2.2 thiol:disulfide interchange protein DsbA compare
NOLOHH_18610 pinR -1.0 -1.5 Serine recombinase PinR compare
NOLOHH_14305 truA -1.0 -3.1 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_00490 -1.0 -4.8 Tail tip assembly protein K compare
NOLOHH_16235 vsr -1.0 -1.9 VSPR family DNA mismatch endonuclease compare
NOLOHH_20185 rnb -1.0 -1.7 exoribonuclease II compare
NOLOHH_22935 ninB -1.0 -4.7 Protein ninB compare
NOLOHH_17785 sufD -1.0 -1.1 Fe-S cluster assembly protein SufD compare
NOLOHH_19510 feaR -1.0 -1.9 transcriptional regulator FeaR compare
NOLOHH_14595 arnT -1.0 -1.6 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
NOLOHH_11650 Gly_trna -1.0 -0.7 tRNA-Gly(ccc) compare
NOLOHH_14490 nuoH -1.0 -2.9 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_21210 flgA -1.0 -1.5 flagellar basal body P-ring formation protein FlgA compare
NOLOHH_22915 -1.0 -3.4 hypothetical protein compare
NOLOHH_07535 rfaG -1.0 -3.0 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_13415 guaA -0.9 -1.6 glutamine-hydrolyzing GMP synthase compare
NOLOHH_22880 -0.9 -5.1 phage holin, lambda family compare
NOLOHH_09835 obgE -0.9 -1.1 GTPase ObgE compare
NOLOHH_11145 gshB -0.9 -3.9 glutathione synthase compare
NOLOHH_09725 rapZ -0.9 -3.7 RNase adapter RapZ compare
NOLOHH_05830 metJ -0.9 -1.1 met regulon transcriptional regulator MetJ compare
NOLOHH_14300 usg -0.9 -2.6 aspartate-semialdehyde dehydrogenase compare
NOLOHH_20940 potB -0.9 -1.0 spermidine/putrescine ABC transporter permease PotB compare
NOLOHH_00360 -0.9 -5.8 relaxase/mobilization nuclease compare
NOLOHH_08720 glpD -0.9 -3.8 glycerol-3-phosphate dehydrogenase compare
NOLOHH_18755 yneJ -0.9 -1.1 Uncharacterized HTH-type transcriptional regulator YneJ compare
NOLOHH_11490 fldB -0.9 -3.4 flavodoxin FldB compare
NOLOHH_14480 nuoF -0.9 -3.4 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_20355 ompW -0.9 -1.6 outer membrane protein OmpW compare
NOLOHH_04165 treC -0.9 -2.7 alpha,alpha-phosphotrehalase compare
NOLOHH_22990 -0.9 -3.9 superinfection exclusion protein B compare
NOLOHH_10640 ygiN -0.9 -1.0 putative quinol monooxygenase YgiN compare
NOLOHH_11740 pbl -0.9 -0.9 Putative peptidoglycan-binding-like protein compare
NOLOHH_16530 otsA -0.9 -1.6 alpha,alpha-trehalose-phosphate synthase compare
NOLOHH_22805 -0.9 -6.5 DNA transfer protein compare
NOLOHH_19785 -0.9 -1.6 DUF977 domain-containing protein compare
NOLOHH_18730 marC -0.9 -1.2 NAAT family transporter MarC compare
NOLOHH_14520 nuoN -0.9 -2.9 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_24495 -0.9 -0.8 lngG compare
NOLOHH_24835 traK -0.9 -1.8 type-F conjugative transfer system secretin TraK compare
NOLOHH_18955 ddpX -0.9 -1.3 D-alanyl-D-alanine dipeptidase compare
NOLOHH_14120 emrK -0.9 -2.1 multidrug efflux MFS transporter periplasmic adaptor subunit EmrK compare
NOLOHH_22860 -0.8 -2.8 terminase small subunit compare
NOLOHH_06115 -0.8 -1.7 transcriptional regulator compare
NOLOHH_11515 lysS -0.8 -1.4 lysine--tRNA ligase compare
NOLOHH_16700 -0.8 -1.5 putative transcriptional regulatory protein YebC compare
NOLOHH_21015 ycfJ -0.8 -1.0 Uncharacterized protein YcfJ compare
NOLOHH_08270 hdeA -0.8 -2.3 acid-activated periplasmic chaperone HdeA compare
NOLOHH_00605 essD -0.8 -1.1 phage lysis protein EssD compare
NOLOHH_21450 pgaB -0.8 -1.2 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
NOLOHH_18050 rsxE -0.8 -1.3 electron transport complex subunit RsxE compare
NOLOHH_04490 nsrR -0.8 -3.3 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_21560 yccJ -0.8 -0.9 Uncharacterized protein YccJ compare
NOLOHH_23020 -0.8 -1.5 hypothetical protein compare
NOLOHH_13300 iscA -0.8 -1.1 iron-sulfur cluster assembly protein IscA compare
NOLOHH_10890 -0.8 -1.7 phosphopantetheine attachment site family protein compare
NOLOHH_24345 -0.8 -0.9 colicin transporter compare
NOLOHH_02485 rnhB -0.8 -1.7 ribonuclease HII compare
NOLOHH_14465 nuoB -0.8 -3.3 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_20300 yciO -0.8 -2.1 L-threonylcarbamoyladenylate synthase compare
NOLOHH_21045 lpoB -0.8 -2.3 penicillin-binding protein activator LpoB compare
NOLOHH_22810 -0.8 -4.5 DNA transfer protein compare
NOLOHH_16595 cheY -0.8 -1.4 chemotaxis regulatory protein CheY compare
NOLOHH_00575 -0.8 -1.3 DNA-packaging protein compare
NOLOHH_21845 zapC -0.8 -1.5 cell division protein ZapC compare
NOLOHH_05225 dgkA -0.8 -1.8 diacylglycerol kinase compare
NOLOHH_18115 hdhA -0.8 -1.0 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_22830 -0.8 -4.4 packaged DNA stabilization protein p27 compare
NOLOHH_17355 gdhA -0.8 -1.8 NADP-specific glutamate dehydrogenase compare
NOLOHH_21095 fabF -0.8 -1.5 beta-ketoacyl-ACP synthase II compare
NOLOHH_23050 -0.8 -3.0 Ead/Ea22-like protein compare
NOLOHH_11990 ygdI -0.8 -3.1 Uncharacterized lipoprotein YgdI compare
NOLOHH_01355 thiI -0.7 -3.1 tRNA sulfurtransferase compare
NOLOHH_00485 -0.7 -3.3 Phage-related protein, tail assembly protein I compare
NOLOHH_22960 -0.7 -2.1 Bacteriophage CII protein compare
NOLOHH_12160 -0.7 -3.0 TPM-phosphatase domain-containing protein compare
NOLOHH_03075 leuD -0.7 -1.8 3-isopropylmalate dehydratase small subunit compare
NOLOHH_18060 rsxD -0.7 -1.8 electron transport complex subunit RsxD compare
NOLOHH_09845 greA -0.7 -0.9 transcription elongation factor GreA compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms